RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
UBXN2A-201ENST00000309033 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
UBXN2A-201ENST00000309033 LINC00472Q9H8W2 130 aa11.27□□□□□ -0.6
UBXN2A-201ENST00000309033 LAMA2P24043 3122 aaKnown RBP11.27□□□□□ -0.6
UBXN2A-201ENST00000309033 Q75L30 129 aa11.26□□□□□ -0.61
UBXN2A-201ENST00000309033 Q5W150 140 aa11.25□□□□□ -0.61
UBXN2A-201ENST00000309033 TRANK1O15050 2925 aa11.25□□□□□ -0.61
UBXN2A-201ENST00000309033 SPRR1BP22528 89 aa11.23□□□□□ -0.61
UBXN2A-201ENST00000309033 Q5XG85 94 aa11.22□□□□□ -0.61
UBXN2A-201ENST00000309033 CAMK2N1Q7Z7J9 78 aa11.2□□□□□ -0.62
UBXN2A-201ENST00000309033 LINC01558Q9Y6Z2 57 aa11.2□□□□□ -0.62
UBXN2A-201ENST00000309033 M0R2T5 61 aa11.19□□□□□ -0.62
UBXN2A-201ENST00000309033 FP248Q71RG6 208 aaPredicted RBP11.19□□□□□ -0.62
UBXN2A-201ENST00000309033 UNC80Q8N2C7 3258 aa11.19□□□□□ -0.62
UBXN2A-201ENST00000309033 S4R3F8 94 aa11.18□□□□□ -0.62
UBXN2A-201ENST00000309033 WDFY4Q6ZS81 3184 aa11.18□□□□□ -0.62
UBXN2A-201ENST00000309033 PRUNE2Q8WUY3 3088 aa11.17□□□□□ -0.62
UBXN2A-201ENST00000309033 CHD6Q8TD26 2715 aa11.17□□□□□ -0.62
UBXN2A-201ENST00000309033 KRTAP10-2P60368 255 aa11.16□□□□□ -0.62
UBXN2A-201ENST00000309033 KRTAP10-1P60331 282 aa11.15□□□□□ -0.62
UBXN2A-201ENST00000309033 TRIOO75962 3097 aa11.15□□□□□ -0.62
UBXN2A-201ENST00000309033 XIRP2A4UGR9 3374 aa11.14□□□□□ -0.63
UBXN2A-201ENST00000309033 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
UBXN2A-201ENST00000309033 SPINK7P58062 85 aa11.13□□□□□ -0.63
UBXN2A-201ENST00000309033 PANO1I0J062 215 aa11.1□□□□□ -0.63
UBXN2A-201ENST00000309033 Q5VV11 94 aa11.1□□□□□ -0.63
UBXN2A-201ENST00000309033 CSAG1Q6PB30 78 aa11.1□□□□□ -0.63
UBXN2A-201ENST00000309033 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
UBXN2A-201ENST00000309033 Q5VSD8 79 aa11.08□□□□□ -0.64
UBXN2A-201ENST00000309033 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
UBXN2A-201ENST00000309033 CDH23Q9H251 3354 aa11.06□□□□□ -0.64
UBXN2A-201ENST00000309033 DMAC1Q96GE9 116 aa11.05□□□□□ -0.64
UBXN2A-201ENST00000309033 ZNF292O60281 2723 aa11.04□□□□□ -0.64
UBXN2A-201ENST00000309033 LUZP6Q538Z0 58 aa11.04□□□□□ -0.64
UBXN2A-201ENST00000309033 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
UBXN2A-201ENST00000309033 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
UBXN2A-201ENST00000309033 TEP1Q99973 2627 aaKnown RBP10.99□□□□□ -0.65
UBXN2A-201ENST00000309033 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
UBXN2A-201ENST00000309033 OXTP01178 125 aa10.99□□□□□ -0.65
UBXN2A-201ENST00000309033 LCE6AA0A183 80 aa10.96□□□□□ -0.65
UBXN2A-201ENST00000309033 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
UBXN2A-201ENST00000309033 R4GN34 69 aa10.93□□□□□ -0.66
UBXN2A-201ENST00000309033 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
UBXN2A-201ENST00000309033 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
UBXN2A-201ENST00000309033 STAB1Q9NY15 2570 aa10.9□□□□□ -0.66
UBXN2A-201ENST00000309033 NBEAL1Q6ZS30 2694 aa10.9□□□□□ -0.66
UBXN2A-201ENST00000309033 A0A087X002 238 aa10.9□□□□□ -0.66
UBXN2A-201ENST00000309033 FRYQ5TBA9 3013 aa10.89□□□□□ -0.67
UBXN2A-201ENST00000309033 SEC61BP60468 96 aaKnown RBP10.87□□□□□ -0.67
UBXN2A-201ENST00000309033 UNC79Q9P2D8 2635 aa10.87□□□□□ -0.67
UBXN2A-201ENST00000309033 Q6ZR54 194 aa10.86□□□□□ -0.67
UBXN2A-201ENST00000309033 NBEAL2Q6ZNJ1 2754 aa10.86□□□□□ -0.67
UBXN2A-201ENST00000309033 KRTAP11-1Q8IUC1 163 aa10.85□□□□□ -0.67
UBXN2A-201ENST00000309033 MAP1AP78559 2803 aaPredicted RBP10.85□□□□□ -0.67
UBXN2A-201ENST00000309033 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
UBXN2A-201ENST00000309033 NOTCH2NLQ7Z3S9 236 aa10.84□□□□□ -0.67
UBXN2A-201ENST00000309033 COL6A5A8TX70 2615 aa10.82□□□□□ -0.68
UBXN2A-201ENST00000309033 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
UBXN2A-201ENST00000309033 H1FX-AS1Q4G0G2 97 aa10.8□□□□□ -0.68
UBXN2A-201ENST00000309033 FREM2Q5SZK8 3169 aa10.8□□□□□ -0.68
UBXN2A-201ENST00000309033 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
UBXN2A-201ENST00000309033 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
UBXN2A-201ENST00000309033 M0QZ58 72 aa10.78□□□□□ -0.68
UBXN2A-201ENST00000309033 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
UBXN2A-201ENST00000309033 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
UBXN2A-201ENST00000309033 SZT2Q5T011 3432 aa10.76□□□□□ -0.69
UBXN2A-201ENST00000309033 SETXQ7Z333 2677 aaKnown RBP10.75□□□□□ -0.69
UBXN2A-201ENST00000309033 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
UBXN2A-201ENST00000309033 ROMO1P60602 79 aa10.72□□□□□ -0.69
UBXN2A-201ENST00000309033 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
UBXN2A-201ENST00000309033 VCANP13611 3396 aa10.72□□□□□ -0.69
UBXN2A-201ENST00000309033 Q6ZRN7 208 aaPredicted RBP10.68□□□□□ -0.7
UBXN2A-201ENST00000309033 LAMA1P25391 3075 aa10.65□□□□□ -0.7
UBXN2A-201ENST00000309033 KALRNO60229 2985 aa10.64□□□□□ -0.71
UBXN2A-201ENST00000309033 UBR5O95071 2799 aaPredicted RBP10.64□□□□□ -0.71
UBXN2A-201ENST00000309033 COL6A3P12111 3177 aa10.58□□□□□ -0.72
UBXN2A-201ENST00000309033 H3BS24 57 aa10.57□□□□□ -0.72
UBXN2A-201ENST00000309033 KRTAP13-2Q52LG2 175 aa10.55□□□□□ -0.72
UBXN2A-201ENST00000309033 ATMQ13315 3056 aa10.53□□□□□ -0.72
UBXN2A-201ENST00000309033 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
UBXN2A-201ENST00000309033 FLG2Q5D862 2391 aaPredicted RBP10.52□□□□□ -0.72
UBXN2A-201ENST00000309033 BAHCC1Q9P281 2608 aa10.51□□□□□ -0.73
UBXN2A-201ENST00000309033 ITPR2Q14571 2701 aa10.51□□□□□ -0.73
UBXN2A-201ENST00000309033 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
UBXN2A-201ENST00000309033 LRBAP50851 2863 aa10.5□□□□□ -0.73
UBXN2A-201ENST00000309033 ITPR1Q14643 2758 aa10.5□□□□□ -0.73
UBXN2A-201ENST00000309033 KRTAP13-1Q8IUC0 172 aa10.49□□□□□ -0.73
UBXN2A-201ENST00000309033 PLAC4Q8WY50 150 aa10.49□□□□□ -0.73
UBXN2A-201ENST00000309033 BOD1L1Q8NFC6 3051 aa10.48□□□□□ -0.73
UBXN2A-201ENST00000309033 A8MU10 97 aa10.48□□□□□ -0.73
UBXN2A-201ENST00000309033 TACC2O95359 2948 aa10.47□□□□□ -0.73
UBXN2A-201ENST00000309033 RPS29P62273 56 aaKnown RBP10.44□□□□□ -0.74
UBXN2A-201ENST00000309033 A0A0A0MQY5 61 aa10.44□□□□□ -0.74
UBXN2A-201ENST00000309033 NBEAQ8NFP9 2946 aa10.42□□□□□ -0.74
UBXN2A-201ENST00000309033 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
UBXN2A-201ENST00000309033 STAB2Q8WWQ8 2551 aa10.42□□□□□ -0.74
UBXN2A-201ENST00000309033 DMXL2Q8TDJ6 3036 aa10.41□□□□□ -0.74
UBXN2A-201ENST00000309033 ADGRG4Q8IZF6 3080 aa10.41□□□□□ -0.74
UBXN2A-201ENST00000309033 FRYLO94915 3013 aa10.39□□□□□ -0.75
UBXN2A-201ENST00000309033 NSD1Q96L73 2696 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms