RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
KRT28-201ENST00000306658 TRBV7-4A0A0J9YYF1 115 aa10.64□□□□□ -0.71
KRT28-201ENST00000306658 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
KRT28-201ENST00000306658 CCKP06307 115 aa10.64□□□□□ -0.71
KRT28-201ENST00000306658 ACYP1P07311 99 aa10.63□□□□□ -0.71
KRT28-201ENST00000306658 Q6ZQT0 140 aa10.63□□□□□ -0.71
KRT28-201ENST00000306658 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
KRT28-201ENST00000306658 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
KRT28-201ENST00000306658 RPL37AP61513 92 aaKnown RBP10.59□□□□□ -0.71
KRT28-201ENST00000306658 VPS25Q9BRG1 176 aa10.58□□□□□ -0.72
KRT28-201ENST00000306658 IGLV8-61A0A075B6I0 122 aa10.57□□□□□ -0.72
KRT28-201ENST00000306658 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
KRT28-201ENST00000306658 APOBP04114 4563 aaKnown RBP10.55□□□□□ -0.72
KRT28-201ENST00000306658 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
KRT28-201ENST00000306658 Q6JHZ5 121 aa10.53□□□□□ -0.72
KRT28-201ENST00000306658 CDIP1Q9H305 208 aa10.53□□□□□ -0.72
KRT28-201ENST00000306658 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
KRT28-201ENST00000306658 IGFL1Q6UW32 110 aa10.51□□□□□ -0.73
KRT28-201ENST00000306658 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
KRT28-201ENST00000306658 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
KRT28-201ENST00000306658 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
KRT28-201ENST00000306658 A0A1B0GW54 56 aa10.49□□□□□ -0.73
KRT28-201ENST00000306658 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
KRT28-201ENST00000306658 SPINK6Q6UWN8 80 aa10.49□□□□□ -0.73
KRT28-201ENST00000306658 Q8NBF4 154 aa10.49□□□□□ -0.73
KRT28-201ENST00000306658 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
KRT28-201ENST00000306658 UBL5Q9BZL1 73 aa10.46□□□□□ -0.74
KRT28-201ENST00000306658 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
KRT28-201ENST00000306658 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
KRT28-201ENST00000306658 MOBPQ13875 183 aa10.44□□□□□ -0.74
KRT28-201ENST00000306658 FAM229BQ4G0N7 80 aa10.44□□□□□ -0.74
KRT28-201ENST00000306658 PLA2G1BP04054 148 aaKnown RBP10.44□□□□□ -0.74
KRT28-201ENST00000306658 CRYGAP11844 174 aa10.44□□□□□ -0.74
KRT28-201ENST00000306658 LINC00643Q86TS7 51 aa10.44□□□□□ -0.74
KRT28-201ENST00000306658 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
KRT28-201ENST00000306658 Q6Q795 121 aa10.41□□□□□ -0.74
KRT28-201ENST00000306658 SIGMAR1Q99720 223 aa10.41□□□□□ -0.74
KRT28-201ENST00000306658 KRTAP1-4P0C5Y4 121 aa10.41□□□□□ -0.74
KRT28-201ENST00000306658 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
KRT28-201ENST00000306658 FAT1Q14517 4588 aa10.39□□□□□ -0.75
KRT28-201ENST00000306658 Q6ZVQ6 151 aa10.38□□□□□ -0.75
KRT28-201ENST00000306658 NREPQ16612 68 aa10.38□□□□□ -0.75
KRT28-201ENST00000306658 A0A087X002 238 aa10.37□□□□□ -0.75
KRT28-201ENST00000306658 MT-ATP8P03928 68 aa10.37□□□□□ -0.75
KRT28-201ENST00000306658 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
KRT28-201ENST00000306658 A0A087WSZ3 146 aa10.34□□□□□ -0.75
KRT28-201ENST00000306658 KRTAP13-2Q52LG2 175 aa10.34□□□□□ -0.75
KRT28-201ENST00000306658 Q5VSD8 79 aa10.34□□□□□ -0.75
KRT28-201ENST00000306658 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
KRT28-201ENST00000306658 RYR1P21817 5038 aa10.33□□□□□ -0.76
KRT28-201ENST00000306658 HSPG2P98160 4391 aa10.33□□□□□ -0.76
KRT28-201ENST00000306658 EPPK1P58107 5090 aaKnown RBP10.32□□□□□ -0.76
KRT28-201ENST00000306658 HRCT1Q6UXD1 115 aa10.31□□□□□ -0.76
KRT28-201ENST00000306658 CD164Q04900 197 aa10.3□□□□□ -0.76
KRT28-201ENST00000306658 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
KRT28-201ENST00000306658 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
KRT28-201ENST00000306658 CXCL6P80162 114 aa10.28□□□□□ -0.76
KRT28-201ENST00000306658 IMUPQ9GZP8 106 aa10.28□□□□□ -0.76
KRT28-201ENST00000306658 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.77
KRT28-201ENST00000306658 BPY2O14599 106 aa10.25□□□□□ -0.77
KRT28-201ENST00000306658 Q8N1X5 172 aa10.25□□□□□ -0.77
KRT28-201ENST00000306658 PRR26Q8N8Z3 221 aa10.25□□□□□ -0.77
KRT28-201ENST00000306658 KIAA1109Q2LD37 5005 aa10.25□□□□□ -0.77
KRT28-201ENST00000306658 C4orf48Q5BLP8 95 aa10.22□□□□□ -0.77
KRT28-201ENST00000306658 PKHD1L1Q86WI1 4243 aa10.21□□□□□ -0.78
KRT28-201ENST00000306658 HIST1H4AP62805 103 aaKnown RBP10.2□□□□□ -0.78
KRT28-201ENST00000306658 LINC00472Q9H8W2 130 aa10.19□□□□□ -0.78
KRT28-201ENST00000306658 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
KRT28-201ENST00000306658 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
KRT28-201ENST00000306658 SPINK1P00995 79 aa10.16□□□□□ -0.78
KRT28-201ENST00000306658 J3KT08 172 aa10.15□□□□□ -0.78
KRT28-201ENST00000306658 SCGB1A1P11684 91 aa10.15□□□□□ -0.78
KRT28-201ENST00000306658 SPAG11AQ6PDA7 123 aa10.15□□□□□ -0.78
KRT28-201ENST00000306658 LINC00304Q8N9R0 145 aa10.15□□□□□ -0.78
KRT28-201ENST00000306658 Q5XG85 94 aa10.15□□□□□ -0.79
KRT28-201ENST00000306658 LIMD2Q9BT23 127 aa10.15□□□□□ -0.79
KRT28-201ENST00000306658 DSCR10P59022 87 aa10.14□□□□□ -0.79
KRT28-201ENST00000306658 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
KRT28-201ENST00000306658 Q96NJ1 140 aa10.13□□□□□ -0.79
KRT28-201ENST00000306658 A0A087WVE0 104 aa10.12□□□□□ -0.79
KRT28-201ENST00000306658 Q8N9L7 120 aa10.12□□□□□ -0.79
KRT28-201ENST00000306658 IGKV4-1P06312 121 aa10.11□□□□□ -0.79
KRT28-201ENST00000306658 RPS29P62273 56 aaKnown RBP10.1□□□□□ -0.79
KRT28-201ENST00000306658 A8MWP4 228 aa10.08□□□□□ -0.8
KRT28-201ENST00000306658 K7EQZ3 153 aa10.08□□□□□ -0.8
KRT28-201ENST00000306658 FAM236AA0A1B0GUQ0 79 aa10.07□□□□□ -0.8
KRT28-201ENST00000306658 FAM236BA0A1B0GV22 79 aa10.07□□□□□ -0.8
KRT28-201ENST00000306658 NDUFB1O75438 58 aa10.07□□□□□ -0.8
KRT28-201ENST00000306658 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
KRT28-201ENST00000306658 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
KRT28-201ENST00000306658 FLG2Q5D862 2391 aaPredicted RBP10.03□□□□□ -0.8
KRT28-201ENST00000306658 C1orf195Q5TG92 126 aa10.02□□□□□ -0.8
KRT28-201ENST00000306658 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
KRT28-201ENST00000306658 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
KRT28-201ENST00000306658 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
KRT28-201ENST00000306658 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
KRT28-201ENST00000306658 ATOX1O00244 68 aa9.96□□□□□ -0.81
KRT28-201ENST00000306658 IGHV6-1A0A0B4J1U7 121 aa9.96□□□□□ -0.82
KRT28-201ENST00000306658 KRTAP4-5Q9BYR2 181 aa9.96□□□□□ -0.82
KRT28-201ENST00000306658 OXTP01178 125 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms