RNA–Protein interactions for RNA: ENST00000299314.11

GNPTAB-201, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPTAB, Length 5,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-201ENST00000299314 ROMO1P60602 79 aa14.41□□□□□ -0.1
GNPTAB-201ENST00000299314 RPL37P61927 97 aaKnown RBP14.4□□□□□ -0.1
GNPTAB-201ENST00000299314 A0A0A0MQY5 61 aa14.39□□□□□ -0.11
GNPTAB-201ENST00000299314 H1FX-AS1Q4G0G2 97 aa14.37□□□□□ -0.11
GNPTAB-201ENST00000299314 Q6ZR54 194 aa14.36□□□□□ -0.11
GNPTAB-201ENST00000299314 FLNAP21333 2647 aaKnown RBP14.32□□□□□ -0.12
GNPTAB-201ENST00000299314 KRTAP4-16G5E9R7 235 aaPredicted RBP14.3□□□□□ -0.12
GNPTAB-201ENST00000299314 KRTAP29-1A8MX34 341 aaPredicted RBP14.29□□□□□ -0.12
GNPTAB-201ENST00000299314 KRTAP10-1P60331 282 aa14.23□□□□□ -0.13
GNPTAB-201ENST00000299314 KRTAP10-2P60368 255 aa14.19□□□□□ -0.14
GNPTAB-201ENST00000299314 SEC61BP60468 96 aaKnown RBP14.19□□□□□ -0.14
GNPTAB-201ENST00000299314 ITPR3Q14573 2671 aa14.19□□□□□ -0.14
GNPTAB-201ENST00000299314 ASB16-AS1Q495Z4 193 aa14.19□□□□□ -0.14
GNPTAB-201ENST00000299314 M0QZ58 72 aa14.18□□□□□ -0.14
GNPTAB-201ENST00000299314 SPATA8Q6RVD6 105 aa14.18□□□□□ -0.14
GNPTAB-201ENST00000299314 Q5VSD8 79 aa14.16□□□□□ -0.14
GNPTAB-201ENST00000299314 PANO1I0J062 215 aa14.15□□□□□ -0.14
GNPTAB-201ENST00000299314 FLNBO75369 2602 aaKnown RBP14.14□□□□□ -0.15
GNPTAB-201ENST00000299314 ATRQ13535 2644 aa14.12□□□□□ -0.15
GNPTAB-201ENST00000299314 ADM2Q7Z4H4 148 aa14.08□□□□□ -0.16
GNPTAB-201ENST00000299314 A0A087X002 238 aa14.04□□□□□ -0.16
GNPTAB-201ENST00000299314 NOTCH2NLQ7Z3S9 236 aa14.04□□□□□ -0.16
GNPTAB-201ENST00000299314 C5orf42Q9H799 3197 aa14□□□□□ -0.17
GNPTAB-201ENST00000299314 CEP350Q5VT06 3117 aa14□□□□□ -0.17
GNPTAB-201ENST00000299314 MAST4O15021 2626 aa13.94□□□□□ -0.18
GNPTAB-201ENST00000299314 CHD7Q9P2D1 2997 aa13.93□□□□□ -0.18
GNPTAB-201ENST00000299314 LCE6AA0A183 80 aa13.93□□□□□ -0.18
GNPTAB-201ENST00000299314 A6NN06 94 aa13.93□□□□□ -0.18
GNPTAB-201ENST00000299314 KRTAP11-1Q8IUC1 163 aa13.88□□□□□ -0.19
GNPTAB-201ENST00000299314 UTRNP46939 3433 aa13.83□□□□□ -0.19
GNPTAB-201ENST00000299314 KRTAP25-1Q3LHN0 102 aa13.83□□□□□ -0.2
GNPTAB-201ENST00000299314 PLAC4Q8WY50 150 aa13.83□□□□□ -0.2
GNPTAB-201ENST00000299314 HELZ2Q9BYK8 2649 aaKnown RBP13.82□□□□□ -0.2
GNPTAB-201ENST00000299314 A8MU10 97 aa13.79□□□□□ -0.2
GNPTAB-201ENST00000299314 KRTAP7-1Q8IUC3 87 aa13.77□□□□□ -0.21
GNPTAB-201ENST00000299314 CFAP46Q8IYW2 2715 aa13.73□□□□□ -0.21
GNPTAB-201ENST00000299314 CHD6Q8TD26 2715 aa13.7□□□□□ -0.22
GNPTAB-201ENST00000299314 RPS29P62273 56 aaKnown RBP13.7□□□□□ -0.22
GNPTAB-201ENST00000299314 KRTAP16-1A8MUX0 517 aa13.68□□□□□ -0.22
GNPTAB-201ENST00000299314 CHD9Q3L8U1 2897 aa13.67□□□□□ -0.22
GNPTAB-201ENST00000299314 NBEAL1Q6ZS30 2694 aa13.67□□□□□ -0.22
GNPTAB-201ENST00000299314 AKAP13Q12802 2813 aa13.65□□□□□ -0.22
GNPTAB-201ENST00000299314 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.23
GNPTAB-201ENST00000299314 CFAP54Q96N23 3096 aa13.63□□□□□ -0.23
GNPTAB-201ENST00000299314 A8MUU9 505 aa13.59□□□□□ -0.23
GNPTAB-201ENST00000299314 KRTAP13-1Q8IUC0 172 aa13.58□□□□□ -0.24
GNPTAB-201ENST00000299314 GCN1Q92616 2671 aaKnown RBP13.58□□□□□ -0.24
GNPTAB-201ENST00000299314 KRTAP13-2Q52LG2 175 aa13.57□□□□□ -0.24
GNPTAB-201ENST00000299314 STAB1Q9NY15 2570 aa13.56□□□□□ -0.24
GNPTAB-201ENST00000299314 PCNTO95613 3336 aa13.56□□□□□ -0.24
GNPTAB-201ENST00000299314 CENPEQ02224 2701 aa13.55□□□□□ -0.24
GNPTAB-201ENST00000299314 UNC79Q9P2D8 2635 aa13.52□□□□□ -0.24
GNPTAB-201ENST00000299314 A0A0C4DFX4 3053 aa13.52□□□□□ -0.25
GNPTAB-201ENST00000299314 FLG2Q5D862 2391 aaPredicted RBP13.5□□□□□ -0.25
GNPTAB-201ENST00000299314 DMBT1Q9UGM3 2413 aaPredicted RBP13.49□□□□□ -0.25
GNPTAB-201ENST00000299314 TEX15Q9BXT5 2789 aa13.48□□□□□ -0.25
GNPTAB-201ENST00000299314 MGAQ8IWI9 3026 aa13.47□□□□□ -0.25
GNPTAB-201ENST00000299314 C20orf166-AS1Q96NR2 134 aa13.46□□□□□ -0.25
GNPTAB-201ENST00000299314 NDUFAF8A1L188 74 aa13.43□□□□□ -0.26
GNPTAB-201ENST00000299314 HTTP42858 3142 aa13.38□□□□□ -0.27
GNPTAB-201ENST00000299314 NBEAL2Q6ZNJ1 2754 aa13.33□□□□□ -0.28
GNPTAB-201ENST00000299314 TRANK1O15050 2925 aa13.28□□□□□ -0.28
GNPTAB-201ENST00000299314 TEP1Q99973 2627 aaKnown RBP13.27□□□□□ -0.29
GNPTAB-201ENST00000299314 MKI67P46013 3256 aaKnown RBP13.24□□□□□ -0.29
GNPTAB-201ENST00000299314 NOTCH1P46531 2555 aa13.24□□□□□ -0.29
GNPTAB-201ENST00000299314 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
GNPTAB-201ENST00000299314 ZNF292O60281 2723 aa13.18□□□□□ -0.3
GNPTAB-201ENST00000299314 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
GNPTAB-201ENST00000299314 TNP1P09430 55 aa13.17□□□□□ -0.3
GNPTAB-201ENST00000299314 SETXQ7Z333 2677 aaKnown RBP13.14□□□□□ -0.31
GNPTAB-201ENST00000299314 TRIOO75962 3097 aa13.12□□□□□ -0.31
GNPTAB-201ENST00000299314 C10orf95Q9H7T3 257 aa13.11□□□□□ -0.31
GNPTAB-201ENST00000299314 LAMA2P24043 3122 aaKnown RBP13.08□□□□□ -0.32
GNPTAB-201ENST00000299314 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
GNPTAB-201ENST00000299314 LAMA3Q16787 3333 aa13.04□□□□□ -0.32
GNPTAB-201ENST00000299314 STAB2Q8WWQ8 2551 aa13.02□□□□□ -0.32
GNPTAB-201ENST00000299314 FRYQ5TBA9 3013 aa13.01□□□□□ -0.33
GNPTAB-201ENST00000299314 IGSF10Q6WRI0 2623 aa12.92□□□□□ -0.34
GNPTAB-201ENST00000299314 UBR5O95071 2799 aaPredicted RBP12.91□□□□□ -0.34
GNPTAB-201ENST00000299314 DSPP15924 2871 aaKnown RBP12.89□□□□□ -0.35
GNPTAB-201ENST00000299314 H0YAA0 97 aa12.87□□□□□ -0.35
GNPTAB-201ENST00000299314 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
GNPTAB-201ENST00000299314 PP632Q6XCG6 107 aa12.86□□□□□ -0.35
GNPTAB-201ENST00000299314 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
GNPTAB-201ENST00000299314 BRCA2P51587 3418 aa12.85□□□□□ -0.35
GNPTAB-201ENST00000299314 MAP1AP78559 2803 aaPredicted RBP12.83□□□□□ -0.35
GNPTAB-201ENST00000299314 KRTAP1-4P0C5Y4 121 aa12.83□□□□□ -0.36
GNPTAB-201ENST00000299314 PRUNE2Q8WUY3 3088 aa12.82□□□□□ -0.36
GNPTAB-201ENST00000299314 ITPR2Q14571 2701 aa12.8□□□□□ -0.36
GNPTAB-201ENST00000299314 XP32Q5T750 250 aa12.8□□□□□ -0.36
GNPTAB-201ENST00000299314 FREM2Q5SZK8 3169 aa12.78□□□□□ -0.36
GNPTAB-201ENST00000299314 KALRNO60229 2985 aa12.77□□□□□ -0.37
GNPTAB-201ENST00000299314 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
GNPTAB-201ENST00000299314 VPS13AQ96RL7 3174 aa12.75□□□□□ -0.37
GNPTAB-201ENST00000299314 UNC80Q8N2C7 3258 aa12.73□□□□□ -0.37
GNPTAB-201ENST00000299314 ITPR1Q14643 2758 aa12.7□□□□□ -0.38
GNPTAB-201ENST00000299314 P0C880 135 aa12.68□□□□□ -0.38
GNPTAB-201ENST00000299314 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
GNPTAB-201ENST00000299314 APCP25054 2843 aa12.67□□□□□ -0.38
GNPTAB-201ENST00000299314 CELSR3Q9NYQ7 3312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms