RNA–Protein interactions for RNA: ENST00000299314.11

GNPTAB-201, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPTAB, Length 5,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-201ENST00000299314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.69■■■□□ 2.183e-9■■■■■ 260.8
GNPTAB-201ENST00000299314 DDX3XO00571 662 aaKnown RBP eCLIP24.72■■□□□ 1.556e-8■■■■■ 35.7
GNPTAB-201ENST00000299314 KHSRPQ92945 711 aaKnown RBP eCLIP22.56■■□□□ 1.29e-8■■■■□ 24.8
GNPTAB-201ENST00000299314 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.2■■□□□ 1.312e-7■■■■■ 56.2
GNPTAB-201ENST00000299314 SF3B4Q15427 424 aaKnown RBP eCLIP22.37■■□□□ 1.178e-7■■□□□ 12.3
GNPTAB-201ENST00000299314 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.39■■□□□ 1.183e-6■■□□□ 13.5
GNPTAB-201ENST00000299314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.96■■□□□ 1.753e-6■■■□□ 16.2
GNPTAB-201ENST00000299314 AARSP49588 968 aaKnown RBP eCLIP25.64■■□□□ 1.693e-6■■■■■ 61.8
GNPTAB-201ENST00000299314 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.83■■□□□ 1.733e-6■■■■□ 22
GNPTAB-201ENST00000299314 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.62■■□□□ 1.214e-6■□□□□ 8.7
GNPTAB-201ENST00000299314 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.38■■□□□ 1.497e-6■■■■□ 20.2
GNPTAB-201ENST00000299314 NCBP2P52298 156 aaKnown RBP eCLIP23.67■■□□□ 1.388e-6■■□□□ 13
GNPTAB-201ENST00000299314 YBX3P16989 372 aaKnown RBP eCLIP24.57■■□□□ 1.529e-6■■■□□ 18.1
GNPTAB-201ENST00000299314 PTBP1P26599 531 aaKnown RBP eCLIP22.33■■□□□ 1.169e-6■■■■■ 27.7
Retrieved 14 of 14 RNA–protein pairs in 4.9 ms