RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 KRTAP26-1Q6PEX3 210 aa9.9□□□□□ -0.83
ARHGEF40-201ENST00000298694 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
ARHGEF40-201ENST00000298694 PRRC2CQ9Y520 2896 aaKnown RBP9.89□□□□□ -0.83
ARHGEF40-201ENST00000298694 DNAH12Q6ZR08 3092 aa9.87□□□□□ -0.83
ARHGEF40-201ENST00000298694 LCE6AA0A183 80 aa9.85□□□□□ -0.83
ARHGEF40-201ENST00000298694 ITPR3Q14573 2671 aa9.85□□□□□ -0.83
ARHGEF40-201ENST00000298694 M0QZ58 72 aa9.81□□□□□ -0.84
ARHGEF40-201ENST00000298694 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
ARHGEF40-201ENST00000298694 ATRQ13535 2644 aa9.78□□□□□ -0.84
ARHGEF40-201ENST00000298694 H1FX-AS1Q4G0G2 97 aa9.76□□□□□ -0.85
ARHGEF40-201ENST00000298694 ROMO1P60602 79 aa9.76□□□□□ -0.85
ARHGEF40-201ENST00000298694 UTRNP46939 3433 aa9.75□□□□□ -0.85
ARHGEF40-201ENST00000298694 PANO1I0J062 215 aa9.74□□□□□ -0.85
ARHGEF40-201ENST00000298694 A0A0A0MQY5 61 aa9.73□□□□□ -0.85
ARHGEF40-201ENST00000298694 MAST4O15021 2626 aa9.73□□□□□ -0.85
ARHGEF40-201ENST00000298694 Q6ZR54 194 aa9.72□□□□□ -0.85
ARHGEF40-201ENST00000298694 HELZ2Q9BYK8 2649 aaKnown RBP9.71□□□□□ -0.86
ARHGEF40-201ENST00000298694 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.86
ARHGEF40-201ENST00000298694 SPATA8Q6RVD6 105 aa9.67□□□□□ -0.86
ARHGEF40-201ENST00000298694 KRTAP4-16G5E9R7 235 aaPredicted RBP9.66□□□□□ -0.86
ARHGEF40-201ENST00000298694 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
ARHGEF40-201ENST00000298694 A0A087X002 238 aa9.65□□□□□ -0.86
ARHGEF40-201ENST00000298694 H3BS24 57 aa9.64□□□□□ -0.87
ARHGEF40-201ENST00000298694 OXTP01178 125 aa9.63□□□□□ -0.87
ARHGEF40-201ENST00000298694 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
ARHGEF40-201ENST00000298694 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF40-201ENST00000298694 C5orf42Q9H799 3197 aa9.59□□□□□ -0.87
ARHGEF40-201ENST00000298694 CFAP46Q8IYW2 2715 aa9.59□□□□□ -0.88
ARHGEF40-201ENST00000298694 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
ARHGEF40-201ENST00000298694 PCNTO95613 3336 aa9.5□□□□□ -0.89
ARHGEF40-201ENST00000298694 CHD7Q9P2D1 2997 aa9.5□□□□□ -0.89
ARHGEF40-201ENST00000298694 STAB1Q9NY15 2570 aa9.49□□□□□ -0.89
ARHGEF40-201ENST00000298694 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
ARHGEF40-201ENST00000298694 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
ARHGEF40-201ENST00000298694 NBEAL1Q6ZS30 2694 aa9.4□□□□□ -0.9
ARHGEF40-201ENST00000298694 RPS29P62273 56 aaKnown RBP9.4□□□□□ -0.9
ARHGEF40-201ENST00000298694 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
ARHGEF40-201ENST00000298694 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF40-201ENST00000298694 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF40-201ENST00000298694 TEX15Q9BXT5 2789 aa9.38□□□□□ -0.91
ARHGEF40-201ENST00000298694 AKAP13Q12802 2813 aa9.37□□□□□ -0.91
ARHGEF40-201ENST00000298694 A8MUU9 505 aa9.37□□□□□ -0.91
ARHGEF40-201ENST00000298694 A8MU10 97 aa9.37□□□□□ -0.91
ARHGEF40-201ENST00000298694 CENPEQ02224 2701 aa9.35□□□□□ -0.91
ARHGEF40-201ENST00000298694 KRTAP7-1Q8IUC3 87 aa9.34□□□□□ -0.91
ARHGEF40-201ENST00000298694 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
ARHGEF40-201ENST00000298694 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
ARHGEF40-201ENST00000298694 TEP1Q99973 2627 aaKnown RBP9.28□□□□□ -0.92
ARHGEF40-201ENST00000298694 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
ARHGEF40-201ENST00000298694 CFAP54Q96N23 3096 aa9.26□□□□□ -0.93
ARHGEF40-201ENST00000298694 MGAQ8IWI9 3026 aa9.26□□□□□ -0.93
ARHGEF40-201ENST00000298694 C20orf166-AS1Q96NR2 134 aa9.25□□□□□ -0.93
ARHGEF40-201ENST00000298694 KRTAP25-1Q3LHN0 102 aa9.25□□□□□ -0.93
ARHGEF40-201ENST00000298694 GCN1Q92616 2671 aaKnown RBP9.25□□□□□ -0.93
ARHGEF40-201ENST00000298694 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
ARHGEF40-201ENST00000298694 UNC79Q9P2D8 2635 aa9.21□□□□□ -0.94
ARHGEF40-201ENST00000298694 A6NN06 94 aa9.19□□□□□ -0.94
ARHGEF40-201ENST00000298694 A0A0C4DFX4 3053 aa9.19□□□□□ -0.94
ARHGEF40-201ENST00000298694 COL6A5A8TX70 2615 aa9.19□□□□□ -0.94
ARHGEF40-201ENST00000298694 SETXQ7Z333 2677 aaKnown RBP9.14□□□□□ -0.95
ARHGEF40-201ENST00000298694 HTTP42858 3142 aa9.12□□□□□ -0.95
ARHGEF40-201ENST00000298694 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
ARHGEF40-201ENST00000298694 MKI67P46013 3256 aaKnown RBP9.1□□□□□ -0.95
ARHGEF40-201ENST00000298694 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
ARHGEF40-201ENST00000298694 NOTCH1P46531 2555 aa9.08□□□□□ -0.96
ARHGEF40-201ENST00000298694 RANBP2P49792 3224 aaKnown RBP9.06□□□□□ -0.96
ARHGEF40-201ENST00000298694 TNP1P09430 55 aa9.06□□□□□ -0.96
ARHGEF40-201ENST00000298694 ZNF292O60281 2723 aa9.06□□□□□ -0.96
ARHGEF40-201ENST00000298694 STAB2Q8WWQ8 2551 aa9.02□□□□□ -0.97
ARHGEF40-201ENST00000298694 TRANK1O15050 2925 aa9.01□□□□□ -0.97
ARHGEF40-201ENST00000298694 NDUFAF8A1L188 74 aa8.99□□□□□ -0.97
ARHGEF40-201ENST00000298694 LAMA3Q16787 3333 aa8.99□□□□□ -0.97
ARHGEF40-201ENST00000298694 WDFY4Q6ZS81 3184 aa8.98□□□□□ -0.97
ARHGEF40-201ENST00000298694 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
ARHGEF40-201ENST00000298694 BAHCC1Q9P281 2608 aa8.97□□□□□ -0.97
ARHGEF40-201ENST00000298694 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
ARHGEF40-201ENST00000298694 TRIOO75962 3097 aa8.94□□□□□ -0.98
ARHGEF40-201ENST00000298694 BRCA2P51587 3418 aa8.92□□□□□ -0.98
ARHGEF40-201ENST00000298694 DSPP15924 2871 aaKnown RBP8.9□□□□□ -0.98
ARHGEF40-201ENST00000298694 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.98
ARHGEF40-201ENST00000298694 KRTAP21-3Q3LHN1 58 aa8.89□□□□□ -0.99
ARHGEF40-201ENST00000298694 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
ARHGEF40-201ENST00000298694 FRYQ5TBA9 3013 aa8.89□□□□□ -0.99
ARHGEF40-201ENST00000298694 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
ARHGEF40-201ENST00000298694 PRUNE2Q8WUY3 3088 aa8.87□□□□□ -0.99
ARHGEF40-201ENST00000298694 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
ARHGEF40-201ENST00000298694 A0A1B0GVY2 172 aa8.86□□□□□ -0.99
ARHGEF40-201ENST00000298694 XP32Q5T750 250 aa8.86□□□□□ -0.99
ARHGEF40-201ENST00000298694 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
ARHGEF40-201ENST00000298694 KRTAP1-4P0C5Y4 121 aa8.81□□□□□ -1
ARHGEF40-201ENST00000298694 XIRP2A4UGR9 3374 aa8.8□□□□□ -1
ARHGEF40-201ENST00000298694 MAP1AP78559 2803 aaPredicted RBP8.79□□□□□ -1
ARHGEF40-201ENST00000298694 UNC80Q8N2C7 3258 aa8.74□□□□□ -1.01
ARHGEF40-201ENST00000298694 PP632Q6XCG6 107 aa8.73□□□□□ -1.01
ARHGEF40-201ENST00000298694 ITPR1Q14643 2758 aa8.72□□□□□ -1.01
ARHGEF40-201ENST00000298694 CDH23Q9H251 3354 aa8.7□□□□□ -1.02
ARHGEF40-201ENST00000298694 KMT2BQ9UMN6 2715 aaPredicted RBP8.69□□□□□ -1.02
ARHGEF40-201ENST00000298694 CELSR3Q9NYQ7 3312 aa8.69□□□□□ -1.02
ARHGEF40-201ENST00000298694 FREM2Q5SZK8 3169 aa8.68□□□□□ -1.02
ARHGEF40-201ENST00000298694 VPS13AQ96RL7 3174 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms