RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 C3orf22Q8N5N4 141 aa14.83□□□□□ -0.04
GTF2A1-201ENST00000298173 ZNF706Q9Y5V0 76 aaPredicted RBP14.83□□□□□ -0.04
GTF2A1-201ENST00000298173 LINC00483Q53H64 154 aa14.82□□□□□ -0.04
GTF2A1-201ENST00000298173 JMJD7-PLA2G4BH0Y9G9 81 aa14.81□□□□□ -0.04
GTF2A1-201ENST00000298173 KIAA1109Q2LD37 5005 aa14.76□□□□□ -0.05
GTF2A1-201ENST00000298173 RBM3P98179 157 aaKnown RBP14.76□□□□□ -0.05
GTF2A1-201ENST00000298173 SPINK6Q6UWN8 80 aa14.76□□□□□ -0.05
GTF2A1-201ENST00000298173 A0A1B0GV72 72 aa14.75□□□□□ -0.05
GTF2A1-201ENST00000298173 FAM229AH3BQW9 127 aa14.74□□□□□ -0.05
GTF2A1-201ENST00000298173 C14orf132Q9NPU4 83 aa14.73□□□□□ -0.05
GTF2A1-201ENST00000298173 ANAPC11Q9NYG5 84 aa14.72□□□□□ -0.05
GTF2A1-201ENST00000298173 PLA2G1BP04054 148 aaKnown RBP14.71□□□□□ -0.05
GTF2A1-201ENST00000298173 KRTAP17-1Q9BYP8 105 aa14.71□□□□□ -0.05
GTF2A1-201ENST00000298173 IGLV8-61A0A075B6I0 122 aa14.71□□□□□ -0.06
GTF2A1-201ENST00000298173 TRBV7-4A0A0J9YYF1 115 aa14.7□□□□□ -0.06
GTF2A1-201ENST00000298173 KRTAP1-4P0C5Y4 121 aa14.68□□□□□ -0.06
GTF2A1-201ENST00000298173 LOC110117498A0A087WWA1 95 aa14.68□□□□□ -0.06
GTF2A1-201ENST00000298173 DSCR8Q96T75 97 aa14.68□□□□□ -0.06
GTF2A1-201ENST00000298173 F8WEM9 126 aa14.67□□□□□ -0.06
GTF2A1-201ENST00000298173 Q5VSD8 79 aa14.67□□□□□ -0.06
GTF2A1-201ENST00000298173 Q6ZQT0 140 aa14.65□□□□□ -0.06
GTF2A1-201ENST00000298173 PDE6GP18545 87 aa14.63□□□□□ -0.07
GTF2A1-201ENST00000298173 FAM229BQ4G0N7 80 aa14.62□□□□□ -0.07
GTF2A1-201ENST00000298173 Q8N1X5 172 aa14.62□□□□□ -0.07
GTF2A1-201ENST00000298173 CCKP06307 115 aa14.61□□□□□ -0.07
GTF2A1-201ENST00000298173 IGLV9-49A0A0B4J1Y8 123 aa14.6□□□□□ -0.07
GTF2A1-201ENST00000298173 PKHD1L1Q86WI1 4243 aa14.6□□□□□ -0.07
GTF2A1-201ENST00000298173 IGFL1Q6UW32 110 aa14.59□□□□□ -0.07
GTF2A1-201ENST00000298173 A0A087X002 238 aa14.58□□□□□ -0.08
GTF2A1-201ENST00000298173 J3QR89 54 aa14.58□□□□□ -0.08
GTF2A1-201ENST00000298173 Q6JHZ5 121 aa14.58□□□□□ -0.08
GTF2A1-201ENST00000298173 K7ERU9 68 aa14.56□□□□□ -0.08
GTF2A1-201ENST00000298173 A0A0G2JQZ4 141 aa14.55□□□□□ -0.08
GTF2A1-201ENST00000298173 KRTAP13-2Q52LG2 175 aa14.55□□□□□ -0.08
GTF2A1-201ENST00000298173 C9orf153Q5TBE3 101 aa14.55□□□□□ -0.08
GTF2A1-201ENST00000298173 A0A1W2PNM2 257 aa14.54□□□□□ -0.08
GTF2A1-201ENST00000298173 MOBPQ13875 183 aa14.54□□□□□ -0.08
GTF2A1-201ENST00000298173 Q8NBF4 154 aa14.54□□□□□ -0.08
GTF2A1-201ENST00000298173 CRYGAP11844 174 aa14.53□□□□□ -0.08
GTF2A1-201ENST00000298173 C21orf62-AS1Q17RA5 79 aa14.52□□□□□ -0.08
GTF2A1-201ENST00000298173 BIRC6Q9NR09 4857 aa14.52□□□□□ -0.09
GTF2A1-201ENST00000298173 FAM240AA0A1B0GVK7 77 aa14.5□□□□□ -0.09
GTF2A1-201ENST00000298173 SSBP3-AS1Q7Z2R9 100 aa14.5□□□□□ -0.09
GTF2A1-201ENST00000298173 VPS25Q9BRG1 176 aa14.48□□□□□ -0.09
GTF2A1-201ENST00000298173 ACYP1P07311 99 aa14.47□□□□□ -0.09
GTF2A1-201ENST00000298173 Q6Q795 121 aa14.46□□□□□ -0.1
GTF2A1-201ENST00000298173 A0A1B0GW54 56 aa14.44□□□□□ -0.1
GTF2A1-201ENST00000298173 PRR26Q8N8Z3 221 aa14.42□□□□□ -0.1
GTF2A1-201ENST00000298173 LINC00846Q9NV44 126 aa14.41□□□□□ -0.1
GTF2A1-201ENST00000298173 TYMSOSQ8TAI1 123 aa14.38□□□□□ -0.11
GTF2A1-201ENST00000298173 CD164Q04900 197 aa14.35□□□□□ -0.11
GTF2A1-201ENST00000298173 KRTAP4-5Q9BYR2 181 aa14.35□□□□□ -0.11
GTF2A1-201ENST00000298173 CDIP1Q9H305 208 aa14.35□□□□□ -0.11
GTF2A1-201ENST00000298173 TRBV7-7A0A0K0K1E9 115 aa14.34□□□□□ -0.11
GTF2A1-201ENST00000298173 HRCT1Q6UXD1 115 aa14.33□□□□□ -0.12
GTF2A1-201ENST00000298173 LRP1Q07954 4544 aaKnown RBP14.32□□□□□ -0.12
GTF2A1-201ENST00000298173 A0A087WSZ3 146 aa14.31□□□□□ -0.12
GTF2A1-201ENST00000298173 HERC2O95714 4834 aa14.29□□□□□ -0.12
GTF2A1-201ENST00000298173 FAT3Q8TDW7 4589 aa14.28□□□□□ -0.12
GTF2A1-201ENST00000298173 KRTAP10-8P60410 259 aa14.26□□□□□ -0.13
GTF2A1-201ENST00000298173 Q6ZVQ6 151 aa14.26□□□□□ -0.13
GTF2A1-201ENST00000298173 UBL5Q9BZL1 73 aa14.26□□□□□ -0.13
GTF2A1-201ENST00000298173 FLG2Q5D862 2391 aaPredicted RBP14.26□□□□□ -0.13
GTF2A1-201ENST00000298173 TNXBP22105 4242 aa14.23□□□□□ -0.13
GTF2A1-201ENST00000298173 NREPQ16612 68 aa14.23□□□□□ -0.13
GTF2A1-201ENST00000298173 LINC00304Q8N9R0 145 aa14.21□□□□□ -0.13
GTF2A1-201ENST00000298173 LINC00643Q86TS7 51 aa14.2□□□□□ -0.14
GTF2A1-201ENST00000298173 C4orf48Q5BLP8 95 aa14.2□□□□□ -0.14
GTF2A1-201ENST00000298173 SPAG11AQ6PDA7 123 aa14.2□□□□□ -0.14
GTF2A1-201ENST00000298173 SPINK1P00995 79 aa14.19□□□□□ -0.14
GTF2A1-201ENST00000298173 Q5XG85 94 aa14.19□□□□□ -0.14
GTF2A1-201ENST00000298173 SS18L2Q9UHA2 77 aa14.17□□□□□ -0.14
GTF2A1-201ENST00000298173 MYCBP2O75592 4640 aa14.16□□□□□ -0.14
GTF2A1-201ENST00000298173 LINC00472Q9H8W2 130 aa14.16□□□□□ -0.14
GTF2A1-201ENST00000298173 RPS29P62273 56 aaKnown RBP14.14□□□□□ -0.15
GTF2A1-201ENST00000298173 ASB16-AS1Q495Z4 193 aa14.14□□□□□ -0.15
GTF2A1-201ENST00000298173 MT1HL1P0DM35 61 aa14.13□□□□□ -0.15
GTF2A1-201ENST00000298173 Q96NJ1 140 aa14.13□□□□□ -0.15
GTF2A1-201ENST00000298173 OXTP01178 125 aa14.12□□□□□ -0.15
GTF2A1-201ENST00000298173 ABCA13Q86UQ4 5058 aa14.1□□□□□ -0.15
GTF2A1-201ENST00000298173 LIMD2Q9BT23 127 aa14.09□□□□□ -0.15
GTF2A1-201ENST00000298173 MT-ATP8P03928 68 aa14.07□□□□□ -0.16
GTF2A1-201ENST00000298173 CXCL6P80162 114 aa14.07□□□□□ -0.16
GTF2A1-201ENST00000298173 DEFB116Q30KQ4 102 aa14.07□□□□□ -0.16
GTF2A1-201ENST00000298173 ATP5EP2Q5VTU8 51 aa14.07□□□□□ -0.16
GTF2A1-201ENST00000298173 IGKV3D-7A0A0C4DH55 119 aa14.06□□□□□ -0.16
GTF2A1-201ENST00000298173 BPY2O14599 106 aa14.06□□□□□ -0.16
GTF2A1-201ENST00000298173 SIGMAR1Q99720 223 aa14.04□□□□□ -0.16
GTF2A1-201ENST00000298173 KRTAP29-1A8MX34 341 aaPredicted RBP14.04□□□□□ -0.16
GTF2A1-201ENST00000298173 DSCR10P59022 87 aa14.02□□□□□ -0.16
GTF2A1-201ENST00000298173 C1orf195Q5TG92 126 aa14.01□□□□□ -0.17
GTF2A1-201ENST00000298173 J3KT08 172 aa13.99□□□□□ -0.17
GTF2A1-201ENST00000298173 IGKV4-1P06312 121 aa13.97□□□□□ -0.17
GTF2A1-201ENST00000298173 DMBT1Q9UGM3 2413 aaPredicted RBP13.97□□□□□ -0.17
GTF2A1-201ENST00000298173 IMUPQ9GZP8 106 aa13.95□□□□□ -0.18
GTF2A1-201ENST00000298173 Q8N9L7 120 aa13.92□□□□□ -0.18
GTF2A1-201ENST00000298173 A8MWP4 228 aa13.91□□□□□ -0.18
GTF2A1-201ENST00000298173 K7EQZ3 153 aa13.9□□□□□ -0.18
GTF2A1-201ENST00000298173 HIST1H4AP62805 103 aaKnown RBP13.87□□□□□ -0.19
GTF2A1-201ENST00000298173 PRR15Q8IV56 129 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms