RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 HRES1P13985 223 aa10.51□□□□□ -0.73
CDCP1-201ENST00000296129 Q6ZSA8 131 aa10.5□□□□□ -0.73
CDCP1-201ENST00000296129 SPRR1BP22528 89 aa10.49□□□□□ -0.73
CDCP1-201ENST00000296129 XIRP2A4UGR9 3374 aa10.48□□□□□ -0.73
CDCP1-201ENST00000296129 TRIOO75962 3097 aa10.48□□□□□ -0.73
CDCP1-201ENST00000296129 CDC42SE1Q9NRR8 79 aa10.46□□□□□ -0.74
CDCP1-201ENST00000296129 Q1T7F1 81 aa10.45□□□□□ -0.74
CDCP1-201ENST00000296129 LINC00472Q9H8W2 130 aa10.45□□□□□ -0.74
CDCP1-201ENST00000296129 ZCCHC13Q8WW36 166 aaKnown RBP10.43□□□□□ -0.74
CDCP1-201ENST00000296129 Q8N9P0 234 aaPredicted RBP10.42□□□□□ -0.74
CDCP1-201ENST00000296129 KTN1-AS1Q86SY8 53 aa10.4□□□□□ -0.74
CDCP1-201ENST00000296129 KRTAP10-2P60368 255 aa10.4□□□□□ -0.74
CDCP1-201ENST00000296129 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
CDCP1-201ENST00000296129 CYSTM1Q9H1C7 97 aa10.39□□□□□ -0.75
CDCP1-201ENST00000296129 Q5W150 140 aa10.36□□□□□ -0.75
CDCP1-201ENST00000296129 DSPP15924 2871 aaKnown RBP10.34□□□□□ -0.75
CDCP1-201ENST00000296129 CHD6Q8TD26 2715 aa10.34□□□□□ -0.75
CDCP1-201ENST00000296129 PANO1I0J062 215 aa10.33□□□□□ -0.76
CDCP1-201ENST00000296129 SZT2Q5T011 3432 aa10.32□□□□□ -0.76
CDCP1-201ENST00000296129 LCE6AA0A183 80 aa10.31□□□□□ -0.76
CDCP1-201ENST00000296129 A0A1B0GU33 70 aa10.31□□□□□ -0.76
CDCP1-201ENST00000296129 VPS13AQ96RL7 3174 aa10.31□□□□□ -0.76
CDCP1-201ENST00000296129 LINC00483Q53H64 154 aa10.3□□□□□ -0.76
CDCP1-201ENST00000296129 Q5VSD8 79 aa10.3□□□□□ -0.76
CDCP1-201ENST00000296129 IGSF10Q6WRI0 2623 aa10.3□□□□□ -0.76
CDCP1-201ENST00000296129 Q75L30 129 aa10.29□□□□□ -0.76
CDCP1-201ENST00000296129 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
CDCP1-201ENST00000296129 LCA10Q71F78 164 aa10.29□□□□□ -0.76
CDCP1-201ENST00000296129 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
CDCP1-201ENST00000296129 LINC01558Q9Y6Z2 57 aa10.26□□□□□ -0.77
CDCP1-201ENST00000296129 S4R3F8 94 aa10.25□□□□□ -0.77
CDCP1-201ENST00000296129 CELSR3Q9NYQ7 3312 aa10.25□□□□□ -0.77
CDCP1-201ENST00000296129 TEP1Q99973 2627 aaKnown RBP10.24□□□□□ -0.77
CDCP1-201ENST00000296129 DNAH14Q0VDD8 3507 aa10.24□□□□□ -0.77
CDCP1-201ENST00000296129 SPINK7P58062 85 aa10.23□□□□□ -0.77
CDCP1-201ENST00000296129 Q5XG85 94 aa10.23□□□□□ -0.77
CDCP1-201ENST00000296129 Q6ZR54 194 aa10.23□□□□□ -0.77
CDCP1-201ENST00000296129 GCN1Q92616 2671 aaKnown RBP10.22□□□□□ -0.77
CDCP1-201ENST00000296129 FRYQ5TBA9 3013 aa10.22□□□□□ -0.77
CDCP1-201ENST00000296129 FP248Q71RG6 208 aaPredicted RBP10.2□□□□□ -0.78
CDCP1-201ENST00000296129 M0R2T5 61 aa10.19□□□□□ -0.78
CDCP1-201ENST00000296129 UNC79Q9P2D8 2635 aa10.19□□□□□ -0.78
CDCP1-201ENST00000296129 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
CDCP1-201ENST00000296129 VCANP13611 3396 aa10.16□□□□□ -0.78
CDCP1-201ENST00000296129 LAMA1P25391 3075 aa10.15□□□□□ -0.78
CDCP1-201ENST00000296129 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.79
CDCP1-201ENST00000296129 SETXQ7Z333 2677 aaKnown RBP10.12□□□□□ -0.79
CDCP1-201ENST00000296129 Q5VV11 94 aa10.12□□□□□ -0.79
CDCP1-201ENST00000296129 COL6A5A8TX70 2615 aa10.12□□□□□ -0.79
CDCP1-201ENST00000296129 A0A087X002 238 aa10.11□□□□□ -0.79
CDCP1-201ENST00000296129 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
CDCP1-201ENST00000296129 DMAC1Q96GE9 116 aa10.1□□□□□ -0.79
CDCP1-201ENST00000296129 MAP1AP78559 2803 aaPredicted RBP10.08□□□□□ -0.8
CDCP1-201ENST00000296129 NBEAL2Q6ZNJ1 2754 aa10.07□□□□□ -0.8
CDCP1-201ENST00000296129 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
CDCP1-201ENST00000296129 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
CDCP1-201ENST00000296129 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
CDCP1-201ENST00000296129 BAHCC1Q9P281 2608 aa10.04□□□□□ -0.8
CDCP1-201ENST00000296129 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
CDCP1-201ENST00000296129 OXTP01178 125 aa10.03□□□□□ -0.8
CDCP1-201ENST00000296129 COL6A3P12111 3177 aa10.02□□□□□ -0.8
CDCP1-201ENST00000296129 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
CDCP1-201ENST00000296129 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
CDCP1-201ENST00000296129 STAB1Q9NY15 2570 aa10□□□□□ -0.81
CDCP1-201ENST00000296129 SPTBN5Q9NRC6 3674 aaKnown RBP10□□□□□ -0.81
CDCP1-201ENST00000296129 NOTCH2NLQ7Z3S9 236 aa9.99□□□□□ -0.81
CDCP1-201ENST00000296129 R4GN34 69 aa9.97□□□□□ -0.81
CDCP1-201ENST00000296129 ATMQ13315 3056 aa9.96□□□□□ -0.82
CDCP1-201ENST00000296129 PRAC1Q96KF2 57 aa9.95□□□□□ -0.82
CDCP1-201ENST00000296129 KALRNO60229 2985 aa9.95□□□□□ -0.82
CDCP1-201ENST00000296129 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
CDCP1-201ENST00000296129 ITPR2Q14571 2701 aa9.92□□□□□ -0.82
CDCP1-201ENST00000296129 LRBAP50851 2863 aa9.92□□□□□ -0.82
CDCP1-201ENST00000296129 BOD1L1Q8NFC6 3051 aa9.91□□□□□ -0.82
CDCP1-201ENST00000296129 FREM2Q5SZK8 3169 aa9.88□□□□□ -0.83
CDCP1-201ENST00000296129 H1FX-AS1Q4G0G2 97 aa9.88□□□□□ -0.83
CDCP1-201ENST00000296129 LUZP6Q538Z0 58 aa9.88□□□□□ -0.83
CDCP1-201ENST00000296129 ITPR1Q14643 2758 aa9.88□□□□□ -0.83
CDCP1-201ENST00000296129 ASB16-AS1Q495Z4 193 aa9.87□□□□□ -0.83
CDCP1-201ENST00000296129 FRYLO94915 3013 aa9.85□□□□□ -0.83
CDCP1-201ENST00000296129 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
CDCP1-201ENST00000296129 COL12A1Q99715 3063 aa9.85□□□□□ -0.83
CDCP1-201ENST00000296129 ADGRG4Q8IZF6 3080 aa9.85□□□□□ -0.83
CDCP1-201ENST00000296129 TNRC18O15417 2968 aaPredicted RBP9.85□□□□□ -0.83
CDCP1-201ENST00000296129 RPL37P61927 97 aaKnown RBP9.83□□□□□ -0.84
CDCP1-201ENST00000296129 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
CDCP1-201ENST00000296129 DMXL2Q8TDJ6 3036 aa9.83□□□□□ -0.84
CDCP1-201ENST00000296129 M0QZ58 72 aa9.82□□□□□ -0.84
CDCP1-201ENST00000296129 FLNCQ14315 2725 aa9.82□□□□□ -0.84
CDCP1-201ENST00000296129 RPS29P62273 56 aaKnown RBP9.81□□□□□ -0.84
CDCP1-201ENST00000296129 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
CDCP1-201ENST00000296129 UTP20O75691 2785 aaKnown RBP9.8□□□□□ -0.84
CDCP1-201ENST00000296129 SPATA8Q6RVD6 105 aa9.78□□□□□ -0.84
CDCP1-201ENST00000296129 NBEAQ8NFP9 2946 aa9.78□□□□□ -0.84
CDCP1-201ENST00000296129 TACC2O95359 2948 aa9.77□□□□□ -0.84
CDCP1-201ENST00000296129 ROMO1P60602 79 aa9.75□□□□□ -0.85
CDCP1-201ENST00000296129 NSD1Q96L73 2696 aaPredicted RBP9.75□□□□□ -0.85
CDCP1-201ENST00000296129 EYSQ5T1H1 3165 aa9.74□□□□□ -0.85
CDCP1-201ENST00000296129 KMT2BQ9UMN6 2715 aaPredicted RBP9.71□□□□□ -0.85
CDCP1-201ENST00000296129 KRTAP21-3Q3LHN1 58 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms