RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SPRR1AP35321 89 aa9.41□□□□□ -0.9
SHROOM4-201ENST00000289292 J3QL48 77 aa9.39□□□□□ -0.91
SHROOM4-201ENST00000289292 SZT2Q5T011 3432 aa9.39□□□□□ -0.91
SHROOM4-201ENST00000289292 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
SHROOM4-201ENST00000289292 TRANK1O15050 2925 aa9.34□□□□□ -0.91
SHROOM4-201ENST00000289292 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
SHROOM4-201ENST00000289292 Q5W150 140 aa9.34□□□□□ -0.91
SHROOM4-201ENST00000289292 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
SHROOM4-201ENST00000289292 KRTAP26-1Q6PEX3 210 aa9.32□□□□□ -0.92
SHROOM4-201ENST00000289292 VPS13AQ96RL7 3174 aa9.31□□□□□ -0.92
SHROOM4-201ENST00000289292 VCANP13611 3396 aa9.3□□□□□ -0.92
SHROOM4-201ENST00000289292 KRTAP1-5Q9BYS1 174 aa9.3□□□□□ -0.92
SHROOM4-201ENST00000289292 WDFY4Q6ZS81 3184 aa9.3□□□□□ -0.92
SHROOM4-201ENST00000289292 EPG5Q9HCE0 2579 aa9.29□□□□□ -0.92
SHROOM4-201ENST00000289292 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
SHROOM4-201ENST00000289292 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
SHROOM4-201ENST00000289292 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
SHROOM4-201ENST00000289292 FLNAP21333 2647 aaKnown RBP9.24□□□□□ -0.93
SHROOM4-201ENST00000289292 SPRR1BP22528 89 aa9.21□□□□□ -0.93
SHROOM4-201ENST00000289292 LAMA1P25391 3075 aa9.2□□□□□ -0.94
SHROOM4-201ENST00000289292 USP24Q9UPU5 2620 aa9.2□□□□□ -0.94
SHROOM4-201ENST00000289292 FRYQ5TBA9 3013 aa9.18□□□□□ -0.94
SHROOM4-201ENST00000289292 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
SHROOM4-201ENST00000289292 HECTD1Q9ULT8 2610 aa9.17□□□□□ -0.94
SHROOM4-201ENST00000289292 COL6A3P12111 3177 aa9.17□□□□□ -0.94
SHROOM4-201ENST00000289292 ITPR3Q14573 2671 aa9.17□□□□□ -0.94
SHROOM4-201ENST00000289292 Q6ZSA8 131 aa9.16□□□□□ -0.94
SHROOM4-201ENST00000289292 S4R3F8 94 aa9.15□□□□□ -0.95
SHROOM4-201ENST00000289292 PANO1I0J062 215 aa9.14□□□□□ -0.95
SHROOM4-201ENST00000289292 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
SHROOM4-201ENST00000289292 CAMK2N1Q7Z7J9 78 aa9.1□□□□□ -0.95
SHROOM4-201ENST00000289292 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
SHROOM4-201ENST00000289292 AKAP13Q12802 2813 aa9.08□□□□□ -0.96
SHROOM4-201ENST00000289292 A0A087X002 238 aa9.07□□□□□ -0.96
SHROOM4-201ENST00000289292 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
SHROOM4-201ENST00000289292 A8MU10 97 aa9.06□□□□□ -0.96
SHROOM4-201ENST00000289292 Q6ZR54 194 aa9.06□□□□□ -0.96
SHROOM4-201ENST00000289292 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
SHROOM4-201ENST00000289292 SPEGQ15772 3267 aa9.05□□□□□ -0.96
SHROOM4-201ENST00000289292 ROMO1P60602 79 aa9.05□□□□□ -0.96
SHROOM4-201ENST00000289292 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
SHROOM4-201ENST00000289292 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
SHROOM4-201ENST00000289292 ATRQ13535 2644 aa9.04□□□□□ -0.96
SHROOM4-201ENST00000289292 KRTAP10-2P60368 255 aa9.03□□□□□ -0.96
SHROOM4-201ENST00000289292 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
SHROOM4-201ENST00000289292 SPTBN5Q9NRC6 3674 aaKnown RBP9.03□□□□□ -0.96
SHROOM4-201ENST00000289292 H1FX-AS1Q4G0G2 97 aa9.03□□□□□ -0.96
SHROOM4-201ENST00000289292 A6NN06 94 aa9.03□□□□□ -0.96
SHROOM4-201ENST00000289292 DSPP15924 2871 aaKnown RBP9.02□□□□□ -0.97
SHROOM4-201ENST00000289292 KALRNO60229 2985 aa9.02□□□□□ -0.97
SHROOM4-201ENST00000289292 CHD6Q8TD26 2715 aa9□□□□□ -0.97
SHROOM4-201ENST00000289292 KRTAP10-1P60331 282 aa9□□□□□ -0.97
SHROOM4-201ENST00000289292 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
SHROOM4-201ENST00000289292 REV3LO60673 3130 aa8.98□□□□□ -0.97
SHROOM4-201ENST00000289292 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
SHROOM4-201ENST00000289292 FRYLO94915 3013 aa8.96□□□□□ -0.98
SHROOM4-201ENST00000289292 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
SHROOM4-201ENST00000289292 A0A0A0MQY5 61 aa8.94□□□□□ -0.98
SHROOM4-201ENST00000289292 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
SHROOM4-201ENST00000289292 USP34Q70CQ2 3546 aa8.92□□□□□ -0.98
SHROOM4-201ENST00000289292 GCN1Q92616 2671 aaKnown RBP8.92□□□□□ -0.98
SHROOM4-201ENST00000289292 CENPEQ02224 2701 aa8.92□□□□□ -0.98
SHROOM4-201ENST00000289292 CFAP46Q8IYW2 2715 aa8.91□□□□□ -0.98
SHROOM4-201ENST00000289292 MYO15AQ9UKN7 3530 aa8.89□□□□□ -0.99
SHROOM4-201ENST00000289292 LRBAP50851 2863 aa8.88□□□□□ -0.99
SHROOM4-201ENST00000289292 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
SHROOM4-201ENST00000289292 R4GN34 69 aa8.88□□□□□ -0.99
SHROOM4-201ENST00000289292 NBEAL2Q6ZNJ1 2754 aa8.88□□□□□ -0.99
SHROOM4-201ENST00000289292 BOD1L1Q8NFC6 3051 aa8.87□□□□□ -0.99
SHROOM4-201ENST00000289292 LCE6AA0A183 80 aa8.86□□□□□ -0.99
SHROOM4-201ENST00000289292 M0R2T5 61 aa8.85□□□□□ -0.99
SHROOM4-201ENST00000289292 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
SHROOM4-201ENST00000289292 CFAP47Q6ZTR5 3102 aa8.83□□□□□ -1
SHROOM4-201ENST00000289292 MAST4O15021 2626 aa8.82□□□□□ -1
SHROOM4-201ENST00000289292 FLNBO75369 2602 aaKnown RBP8.81□□□□□ -1
SHROOM4-201ENST00000289292 M0QZ58 72 aa8.81□□□□□ -1
SHROOM4-201ENST00000289292 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
SHROOM4-201ENST00000289292 Q5VSD8 79 aa8.8□□□□□ -1
SHROOM4-201ENST00000289292 EYSQ5T1H1 3165 aa8.78□□□□□ -1
SHROOM4-201ENST00000289292 UNC79Q9P2D8 2635 aa8.77□□□□□ -1.01
SHROOM4-201ENST00000289292 HELZ2Q9BYK8 2649 aaKnown RBP8.77□□□□□ -1.01
SHROOM4-201ENST00000289292 ADGRG4Q8IZF6 3080 aa8.76□□□□□ -1.01
SHROOM4-201ENST00000289292 ZNF292O60281 2723 aa8.76□□□□□ -1.01
SHROOM4-201ENST00000289292 TEX15Q9BXT5 2789 aa8.73□□□□□ -1.01
SHROOM4-201ENST00000289292 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
SHROOM4-201ENST00000289292 ZZEF1O43149 2961 aa8.7□□□□□ -1.02
SHROOM4-201ENST00000289292 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
SHROOM4-201ENST00000289292 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
SHROOM4-201ENST00000289292 ATMQ13315 3056 aa8.66□□□□□ -1.02
SHROOM4-201ENST00000289292 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
SHROOM4-201ENST00000289292 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
SHROOM4-201ENST00000289292 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.03
SHROOM4-201ENST00000289292 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
SHROOM4-201ENST00000289292 SETXQ7Z333 2677 aaKnown RBP8.61□□□□□ -1.03
SHROOM4-201ENST00000289292 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
SHROOM4-201ENST00000289292 DMXL2Q8TDJ6 3036 aa8.59□□□□□ -1.03
SHROOM4-201ENST00000289292 TACC2O95359 2948 aa8.58□□□□□ -1.04
SHROOM4-201ENST00000289292 ASH1LQ9NR48 2969 aaKnown RBP8.55□□□□□ -1.04
SHROOM4-201ENST00000289292 DCHS1Q96JQ0 3298 aa8.54□□□□□ -1.04
SHROOM4-201ENST00000289292 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms