RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
BMP3-201ENST00000282701 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
BMP3-201ENST00000282701 SPRR1BP22528 89 aa10.06□□□□□ -0.8
BMP3-201ENST00000282701 FLNAP21333 2647 aaKnown RBP10.06□□□□□ -0.8
BMP3-201ENST00000282701 HELZ2Q9BYK8 2649 aaKnown RBP10.05□□□□□ -0.8
BMP3-201ENST00000282701 A0A0A0MQY5 61 aa10.01□□□□□ -0.81
BMP3-201ENST00000282701 ITPR3Q14573 2671 aa10□□□□□ -0.81
BMP3-201ENST00000282701 M0R2T5 61 aa10□□□□□ -0.81
BMP3-201ENST00000282701 OXTP01178 125 aa9.96□□□□□ -0.82
BMP3-201ENST00000282701 HTTP42858 3142 aa9.94□□□□□ -0.82
BMP3-201ENST00000282701 KRTAP26-1Q6PEX3 210 aa9.93□□□□□ -0.82
BMP3-201ENST00000282701 R4GN34 69 aa9.93□□□□□ -0.82
BMP3-201ENST00000282701 CHD9Q3L8U1 2897 aa9.93□□□□□ -0.82
BMP3-201ENST00000282701 ROMO1P60602 79 aa9.92□□□□□ -0.82
BMP3-201ENST00000282701 CFAP46Q8IYW2 2715 aa9.91□□□□□ -0.82
BMP3-201ENST00000282701 RPL37P61927 97 aaKnown RBP9.91□□□□□ -0.82
BMP3-201ENST00000282701 CENPEQ02224 2701 aa9.86□□□□□ -0.83
BMP3-201ENST00000282701 H1FX-AS1Q4G0G2 97 aa9.86□□□□□ -0.83
BMP3-201ENST00000282701 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
BMP3-201ENST00000282701 Q6ZR54 194 aa9.81□□□□□ -0.84
BMP3-201ENST00000282701 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
BMP3-201ENST00000282701 SEC61BP60468 96 aaKnown RBP9.77□□□□□ -0.85
BMP3-201ENST00000282701 M0QZ58 72 aa9.76□□□□□ -0.85
BMP3-201ENST00000282701 STAB1Q9NY15 2570 aa9.75□□□□□ -0.85
BMP3-201ENST00000282701 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
BMP3-201ENST00000282701 TRANK1O15050 2925 aa9.72□□□□□ -0.85
BMP3-201ENST00000282701 A0A0C4DFX4 3053 aa9.72□□□□□ -0.85
BMP3-201ENST00000282701 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.86
BMP3-201ENST00000282701 SPATA8Q6RVD6 105 aa9.7□□□□□ -0.86
BMP3-201ENST00000282701 MKI67P46013 3256 aaKnown RBP9.7□□□□□ -0.86
BMP3-201ENST00000282701 RANBP2P49792 3224 aaKnown RBP9.69□□□□□ -0.86
BMP3-201ENST00000282701 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
BMP3-201ENST00000282701 Q5VSD8 79 aa9.68□□□□□ -0.86
BMP3-201ENST00000282701 TEP1Q99973 2627 aaKnown RBP9.67□□□□□ -0.86
BMP3-201ENST00000282701 SETXQ7Z333 2677 aaKnown RBP9.66□□□□□ -0.86
BMP3-201ENST00000282701 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
BMP3-201ENST00000282701 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
BMP3-201ENST00000282701 AKAP13Q12802 2813 aa9.63□□□□□ -0.87
BMP3-201ENST00000282701 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
BMP3-201ENST00000282701 LAMA3Q16787 3333 aa9.6□□□□□ -0.87
BMP3-201ENST00000282701 PANO1I0J062 215 aa9.59□□□□□ -0.87
BMP3-201ENST00000282701 CFAP54Q96N23 3096 aa9.57□□□□□ -0.88
BMP3-201ENST00000282701 CHD6Q8TD26 2715 aa9.56□□□□□ -0.88
BMP3-201ENST00000282701 ZNF292O60281 2723 aa9.56□□□□□ -0.88
BMP3-201ENST00000282701 BRCA2P51587 3418 aa9.55□□□□□ -0.88
BMP3-201ENST00000282701 PLAC4Q8WY50 150 aa9.55□□□□□ -0.88
BMP3-201ENST00000282701 A0A087X002 238 aa9.53□□□□□ -0.88
BMP3-201ENST00000282701 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
BMP3-201ENST00000282701 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
BMP3-201ENST00000282701 A6NN06 94 aa9.53□□□□□ -0.88
BMP3-201ENST00000282701 LAMA2P24043 3122 aaKnown RBP9.51□□□□□ -0.89
BMP3-201ENST00000282701 MGAQ8IWI9 3026 aa9.51□□□□□ -0.89
BMP3-201ENST00000282701 LCE6AA0A183 80 aa9.51□□□□□ -0.89
BMP3-201ENST00000282701 KRTAP25-1Q3LHN0 102 aa9.5□□□□□ -0.89
BMP3-201ENST00000282701 KRTAP16-1A8MUX0 517 aa9.48□□□□□ -0.89
BMP3-201ENST00000282701 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
BMP3-201ENST00000282701 A8MU10 97 aa9.43□□□□□ -0.9
BMP3-201ENST00000282701 UNC80Q8N2C7 3258 aa9.42□□□□□ -0.9
BMP3-201ENST00000282701 NOTCH1P46531 2555 aa9.41□□□□□ -0.9
BMP3-201ENST00000282701 UNC79Q9P2D8 2635 aa9.41□□□□□ -0.9
BMP3-201ENST00000282701 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
BMP3-201ENST00000282701 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
BMP3-201ENST00000282701 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
BMP3-201ENST00000282701 PRUNE2Q8WUY3 3088 aa9.35□□□□□ -0.91
BMP3-201ENST00000282701 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
BMP3-201ENST00000282701 BAHCC1Q9P281 2608 aa9.34□□□□□ -0.92
BMP3-201ENST00000282701 TRIOO75962 3097 aa9.33□□□□□ -0.92
BMP3-201ENST00000282701 A8MUU9 505 aa9.32□□□□□ -0.92
BMP3-201ENST00000282701 WDFY4Q6ZS81 3184 aa9.32□□□□□ -0.92
BMP3-201ENST00000282701 DSPP15924 2871 aaKnown RBP9.32□□□□□ -0.92
BMP3-201ENST00000282701 IGSF10Q6WRI0 2623 aa9.31□□□□□ -0.92
BMP3-201ENST00000282701 CDH23Q9H251 3354 aa9.3□□□□□ -0.92
BMP3-201ENST00000282701 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
BMP3-201ENST00000282701 C20orf166-AS1Q96NR2 134 aa9.3□□□□□ -0.92
BMP3-201ENST00000282701 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.92
BMP3-201ENST00000282701 XIRP2A4UGR9 3374 aa9.26□□□□□ -0.93
BMP3-201ENST00000282701 NDUFAF8A1L188 74 aa9.26□□□□□ -0.93
BMP3-201ENST00000282701 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
BMP3-201ENST00000282701 MAP1AP78559 2803 aaPredicted RBP9.24□□□□□ -0.93
BMP3-201ENST00000282701 UBR5O95071 2799 aaPredicted RBP9.24□□□□□ -0.93
BMP3-201ENST00000282701 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
BMP3-201ENST00000282701 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
BMP3-201ENST00000282701 VPS13AQ96RL7 3174 aa9.21□□□□□ -0.93
BMP3-201ENST00000282701 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
BMP3-201ENST00000282701 FRYQ5TBA9 3013 aa9.15□□□□□ -0.94
BMP3-201ENST00000282701 DNAH14Q0VDD8 3507 aa9.12□□□□□ -0.95
BMP3-201ENST00000282701 CELSR3Q9NYQ7 3312 aa9.1□□□□□ -0.95
BMP3-201ENST00000282701 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
BMP3-201ENST00000282701 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
BMP3-201ENST00000282701 SZT2Q5T011 3432 aa9.08□□□□□ -0.96
BMP3-201ENST00000282701 TNP1P09430 55 aa9.08□□□□□ -0.96
BMP3-201ENST00000282701 LAMA1P25391 3075 aa9.08□□□□□ -0.96
BMP3-201ENST00000282701 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
BMP3-201ENST00000282701 VCANP13611 3396 aa9.05□□□□□ -0.96
BMP3-201ENST00000282701 C10orf95Q9H7T3 257 aa9.04□□□□□ -0.96
BMP3-201ENST00000282701 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
BMP3-201ENST00000282701 FLNCQ14315 2725 aa8.94□□□□□ -0.98
BMP3-201ENST00000282701 KALRNO60229 2985 aa8.93□□□□□ -0.98
BMP3-201ENST00000282701 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
BMP3-201ENST00000282701 TACC2O95359 2948 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms