RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 R4GN34 69 aa7.16□□□□□ -1.26
SHPRH-201ENST00000275233 SPRR1AP35321 89 aa7.16□□□□□ -1.26
SHPRH-201ENST00000275233 HELZ2Q9BYK8 2649 aaKnown RBP7.15□□□□□ -1.26
SHPRH-201ENST00000275233 CFAP46Q8IYW2 2715 aa7.15□□□□□ -1.26
SHPRH-201ENST00000275233 BRCA2P51587 3418 aa7.14□□□□□ -1.27
SHPRH-201ENST00000275233 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
SHPRH-201ENST00000275233 XIRP2A4UGR9 3374 aa7.13□□□□□ -1.27
SHPRH-201ENST00000275233 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
SHPRH-201ENST00000275233 Q75L30 129 aa7.12□□□□□ -1.27
SHPRH-201ENST00000275233 MAST4O15021 2626 aa7.12□□□□□ -1.27
SHPRH-201ENST00000275233 LCE6AA0A183 80 aa7.12□□□□□ -1.27
SHPRH-201ENST00000275233 LINC00472Q9H8W2 130 aa7.12□□□□□ -1.27
SHPRH-201ENST00000275233 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
SHPRH-201ENST00000275233 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
SHPRH-201ENST00000275233 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.27
SHPRH-201ENST00000275233 LAMA2P24043 3122 aaKnown RBP7.09□□□□□ -1.27
SHPRH-201ENST00000275233 MGAQ8IWI9 3026 aa7.08□□□□□ -1.28
SHPRH-201ENST00000275233 HTTP42858 3142 aa7.08□□□□□ -1.28
SHPRH-201ENST00000275233 PANO1I0J062 215 aa7.08□□□□□ -1.28
SHPRH-201ENST00000275233 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
SHPRH-201ENST00000275233 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
SHPRH-201ENST00000275233 A0A0C4DFX4 3053 aa7.07□□□□□ -1.28
SHPRH-201ENST00000275233 PRUNE2Q8WUY3 3088 aa7.06□□□□□ -1.28
SHPRH-201ENST00000275233 TRIOO75962 3097 aa7.05□□□□□ -1.28
SHPRH-201ENST00000275233 M0QZ58 72 aa7.05□□□□□ -1.28
SHPRH-201ENST00000275233 SPRR1BP22528 89 aa7.05□□□□□ -1.28
SHPRH-201ENST00000275233 AKAP13Q12802 2813 aa7.02□□□□□ -1.28
SHPRH-201ENST00000275233 CELSR3Q9NYQ7 3312 aa7.02□□□□□ -1.29
SHPRH-201ENST00000275233 CHD9Q3L8U1 2897 aa7.01□□□□□ -1.29
SHPRH-201ENST00000275233 Q5VV11 94 aa7.01□□□□□ -1.29
SHPRH-201ENST00000275233 CHD6Q8TD26 2715 aa7□□□□□ -1.29
SHPRH-201ENST00000275233 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
SHPRH-201ENST00000275233 WDFY4Q6ZS81 3184 aa7□□□□□ -1.29
SHPRH-201ENST00000275233 TEX15Q9BXT5 2789 aa6.99□□□□□ -1.29
SHPRH-201ENST00000275233 A0A087X002 238 aa6.99□□□□□ -1.29
SHPRH-201ENST00000275233 Q5XG85 94 aa6.99□□□□□ -1.29
SHPRH-201ENST00000275233 FP248Q71RG6 208 aaPredicted RBP6.99□□□□□ -1.29
SHPRH-201ENST00000275233 CENPEQ02224 2701 aa6.98□□□□□ -1.29
SHPRH-201ENST00000275233 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
SHPRH-201ENST00000275233 UNC80Q8N2C7 3258 aa6.97□□□□□ -1.29
SHPRH-201ENST00000275233 CDH23Q9H251 3354 aa6.96□□□□□ -1.29
SHPRH-201ENST00000275233 Q6ZR54 194 aa6.96□□□□□ -1.3
SHPRH-201ENST00000275233 H1FX-AS1Q4G0G2 97 aa6.94□□□□□ -1.3
SHPRH-201ENST00000275233 RPL37P61927 97 aaKnown RBP6.94□□□□□ -1.3
SHPRH-201ENST00000275233 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
SHPRH-201ENST00000275233 FLG2Q5D862 2391 aaPredicted RBP6.92□□□□□ -1.3
SHPRH-201ENST00000275233 ROMO1P60602 79 aa6.91□□□□□ -1.3
SHPRH-201ENST00000275233 TEP1Q99973 2627 aaKnown RBP6.91□□□□□ -1.3
SHPRH-201ENST00000275233 FREM2Q5SZK8 3169 aa6.91□□□□□ -1.3
SHPRH-201ENST00000275233 OXTP01178 125 aa6.9□□□□□ -1.31
SHPRH-201ENST00000275233 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.31
SHPRH-201ENST00000275233 STAB1Q9NY15 2570 aa6.89□□□□□ -1.31
SHPRH-201ENST00000275233 DNAH14Q0VDD8 3507 aa6.88□□□□□ -1.31
SHPRH-201ENST00000275233 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
SHPRH-201ENST00000275233 NBEAL1Q6ZS30 2694 aa6.87□□□□□ -1.31
SHPRH-201ENST00000275233 KRTAP4-16G5E9R7 235 aaPredicted RBP6.87□□□□□ -1.31
SHPRH-201ENST00000275233 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
SHPRH-201ENST00000275233 TRANK1O15050 2925 aa6.82□□□□□ -1.32
SHPRH-201ENST00000275233 A0A0A0MQY5 61 aa6.82□□□□□ -1.32
SHPRH-201ENST00000275233 FRYQ5TBA9 3013 aa6.8□□□□□ -1.32
SHPRH-201ENST00000275233 GCN1Q92616 2671 aaKnown RBP6.8□□□□□ -1.32
SHPRH-201ENST00000275233 H3BS24 57 aa6.8□□□□□ -1.32
SHPRH-201ENST00000275233 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
SHPRH-201ENST00000275233 UNC79Q9P2D8 2635 aa6.78□□□□□ -1.32
SHPRH-201ENST00000275233 SETXQ7Z333 2677 aaKnown RBP6.78□□□□□ -1.32
SHPRH-201ENST00000275233 SZT2Q5T011 3432 aa6.77□□□□□ -1.33
SHPRH-201ENST00000275233 COL6A3P12111 3177 aa6.77□□□□□ -1.33
SHPRH-201ENST00000275233 NBEAL2Q6ZNJ1 2754 aa6.76□□□□□ -1.33
SHPRH-201ENST00000275233 A8MU10 97 aa6.75□□□□□ -1.33
SHPRH-201ENST00000275233 DSPP15924 2871 aaKnown RBP6.75□□□□□ -1.33
SHPRH-201ENST00000275233 Q6ZRN7 208 aaPredicted RBP6.74□□□□□ -1.33
SHPRH-201ENST00000275233 A8MUU9 505 aa6.74□□□□□ -1.33
SHPRH-201ENST00000275233 COL6A5A8TX70 2615 aa6.73□□□□□ -1.33
SHPRH-201ENST00000275233 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
SHPRH-201ENST00000275233 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
SHPRH-201ENST00000275233 MAP1AP78559 2803 aaPredicted RBP6.71□□□□□ -1.34
SHPRH-201ENST00000275233 VCANP13611 3396 aa6.71□□□□□ -1.34
SHPRH-201ENST00000275233 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
SHPRH-201ENST00000275233 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
SHPRH-201ENST00000275233 C20orf166-AS1Q96NR2 134 aa6.69□□□□□ -1.34
SHPRH-201ENST00000275233 ZNF292O60281 2723 aa6.69□□□□□ -1.34
SHPRH-201ENST00000275233 KALRNO60229 2985 aa6.67□□□□□ -1.34
SHPRH-201ENST00000275233 LAMA1P25391 3075 aa6.66□□□□□ -1.34
SHPRH-201ENST00000275233 NOTCH1P46531 2555 aa6.65□□□□□ -1.34
SHPRH-201ENST00000275233 CFAP47Q6ZTR5 3102 aa6.64□□□□□ -1.35
SHPRH-201ENST00000275233 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
SHPRH-201ENST00000275233 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
SHPRH-201ENST00000275233 REV3LO60673 3130 aa6.63□□□□□ -1.35
SHPRH-201ENST00000275233 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
SHPRH-201ENST00000275233 RPS29P62273 56 aaKnown RBP6.62□□□□□ -1.35
SHPRH-201ENST00000275233 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
SHPRH-201ENST00000275233 LRBAP50851 2863 aa6.59□□□□□ -1.35
SHPRH-201ENST00000275233 DMXL2Q8TDJ6 3036 aa6.57□□□□□ -1.36
SHPRH-201ENST00000275233 SPEGQ15772 3267 aa6.56□□□□□ -1.36
SHPRH-201ENST00000275233 UBR5O95071 2799 aaPredicted RBP6.56□□□□□ -1.36
SHPRH-201ENST00000275233 STAB2Q8WWQ8 2551 aa6.56□□□□□ -1.36
SHPRH-201ENST00000275233 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
SHPRH-201ENST00000275233 BOD1L1Q8NFC6 3051 aa6.55□□□□□ -1.36
SHPRH-201ENST00000275233 A0A1B0GVY2 172 aa6.54□□□□□ -1.36
SHPRH-201ENST00000275233 TACC2O95359 2948 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms