RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
TNFSF9-201ENST00000245817 C21orf62-AS1Q17RA5 79 aa11.45□□□□□ -0.58
TNFSF9-201ENST00000245817 Q6ZQT0 140 aa11.44□□□□□ -0.58
TNFSF9-201ENST00000245817 TRBV7-4A0A0J9YYF1 115 aa11.43□□□□□ -0.58
TNFSF9-201ENST00000245817 SPRR1BP22528 89 aa11.42□□□□□ -0.58
TNFSF9-201ENST00000245817 SMIM29Q86T20 159 aa11.41□□□□□ -0.58
TNFSF9-201ENST00000245817 SPRR4Q96PI1 79 aa11.4□□□□□ -0.59
TNFSF9-201ENST00000245817 CDIP1Q9H305 208 aa11.4□□□□□ -0.59
TNFSF9-201ENST00000245817 XGP55808 180 aa11.33□□□□□ -0.6
TNFSF9-201ENST00000245817 LINC00483Q53H64 154 aa11.33□□□□□ -0.6
TNFSF9-201ENST00000245817 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
TNFSF9-201ENST00000245817 SIGMAR1Q99720 223 aa11.33□□□□□ -0.6
TNFSF9-201ENST00000245817 LINC00846Q9NV44 126 aa11.33□□□□□ -0.6
TNFSF9-201ENST00000245817 IGLV8-61A0A075B6I0 122 aa11.32□□□□□ -0.6
TNFSF9-201ENST00000245817 RPL37AP61513 92 aaKnown RBP11.31□□□□□ -0.6
TNFSF9-201ENST00000245817 Q6JHZ5 121 aa11.31□□□□□ -0.6
TNFSF9-201ENST00000245817 UBL5Q9BZL1 73 aa11.3□□□□□ -0.6
TNFSF9-201ENST00000245817 IGLV9-49A0A0B4J1Y8 123 aa11.29□□□□□ -0.6
TNFSF9-201ENST00000245817 C9orf153Q5TBE3 101 aa11.28□□□□□ -0.6
TNFSF9-201ENST00000245817 IGFL1Q6UW32 110 aa11.28□□□□□ -0.6
TNFSF9-201ENST00000245817 LINC00643Q86TS7 51 aa11.28□□□□□ -0.6
TNFSF9-201ENST00000245817 BIRC6Q9NR09 4857 aa11.28□□□□□ -0.6
TNFSF9-201ENST00000245817 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.6
TNFSF9-201ENST00000245817 Q8NBF4 154 aa11.27□□□□□ -0.6
TNFSF9-201ENST00000245817 A0A1B0GW54 56 aa11.27□□□□□ -0.61
TNFSF9-201ENST00000245817 CDK2AP2O75956 126 aa11.27□□□□□ -0.61
TNFSF9-201ENST00000245817 A0A1W2PNM2 257 aa11.25□□□□□ -0.61
TNFSF9-201ENST00000245817 ANAPC11Q9NYG5 84 aa11.25□□□□□ -0.61
TNFSF9-201ENST00000245817 MT-ATP8P03928 68 aa11.24□□□□□ -0.61
TNFSF9-201ENST00000245817 HSPG2P98160 4391 aa11.22□□□□□ -0.61
TNFSF9-201ENST00000245817 A0A0G2JQZ4 141 aa11.21□□□□□ -0.61
TNFSF9-201ENST00000245817 RYR1P21817 5038 aa11.21□□□□□ -0.62
TNFSF9-201ENST00000245817 KIAA1109Q2LD37 5005 aa11.21□□□□□ -0.62
TNFSF9-201ENST00000245817 CRYGAP11844 174 aa11.2□□□□□ -0.62
TNFSF9-201ENST00000245817 MOBPQ13875 183 aa11.2□□□□□ -0.62
TNFSF9-201ENST00000245817 NREPQ16612 68 aa11.2□□□□□ -0.62
TNFSF9-201ENST00000245817 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
TNFSF9-201ENST00000245817 Q6ZVQ6 151 aa11.2□□□□□ -0.62
TNFSF9-201ENST00000245817 SRRM2Q9UQ35 2752 aaKnown RBP11.18□□□□□ -0.62
TNFSF9-201ENST00000245817 ATP5EP2Q5VTU8 51 aa11.16□□□□□ -0.62
TNFSF9-201ENST00000245817 Q6Q795 121 aa11.16□□□□□ -0.62
TNFSF9-201ENST00000245817 FAM229BQ4G0N7 80 aa11.15□□□□□ -0.62
TNFSF9-201ENST00000245817 IGKV3D-7A0A0C4DH55 119 aa11.14□□□□□ -0.63
TNFSF9-201ENST00000245817 FAT1Q14517 4588 aa11.14□□□□□ -0.63
TNFSF9-201ENST00000245817 A0A087WSZ3 146 aa11.13□□□□□ -0.63
TNFSF9-201ENST00000245817 FAM229AH3BQW9 127 aa11.13□□□□□ -0.63
TNFSF9-201ENST00000245817 TRBV7-7A0A0K0K1E9 115 aa11.12□□□□□ -0.63
TNFSF9-201ENST00000245817 PLA2G1BP04054 148 aaKnown RBP11.12□□□□□ -0.63
TNFSF9-201ENST00000245817 SSBP3-AS1Q7Z2R9 100 aa11.12□□□□□ -0.63
TNFSF9-201ENST00000245817 VPS13BQ7Z7G8 4022 aa11.12□□□□□ -0.63
TNFSF9-201ENST00000245817 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
TNFSF9-201ENST00000245817 HRCT1Q6UXD1 115 aa11.09□□□□□ -0.63
TNFSF9-201ENST00000245817 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
TNFSF9-201ENST00000245817 A0A087X002 238 aa11.08□□□□□ -0.64
TNFSF9-201ENST00000245817 CXCL6P80162 114 aa11.08□□□□□ -0.64
TNFSF9-201ENST00000245817 BPY2O14599 106 aa11.07□□□□□ -0.64
TNFSF9-201ENST00000245817 KRTAP10-4P60372 401 aaPredicted RBP11.05□□□□□ -0.64
TNFSF9-201ENST00000245817 HIST1H4AP62805 103 aaKnown RBP11.05□□□□□ -0.64
TNFSF9-201ENST00000245817 Q8N1X5 172 aa11.05□□□□□ -0.64
TNFSF9-201ENST00000245817 SCGB1A1P11684 91 aa11.04□□□□□ -0.64
TNFSF9-201ENST00000245817 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
TNFSF9-201ENST00000245817 KRTAP13-2Q52LG2 175 aa11.03□□□□□ -0.64
TNFSF9-201ENST00000245817 CD164Q04900 197 aa11.02□□□□□ -0.64
TNFSF9-201ENST00000245817 Q5VSD8 79 aa11.01□□□□□ -0.65
TNFSF9-201ENST00000245817 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
TNFSF9-201ENST00000245817 HERC2O95714 4834 aa11□□□□□ -0.65
TNFSF9-201ENST00000245817 KRTAP17-1Q9BYP8 105 aa10.99□□□□□ -0.65
TNFSF9-201ENST00000245817 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
TNFSF9-201ENST00000245817 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
TNFSF9-201ENST00000245817 PRR26Q8N8Z3 221 aa10.95□□□□□ -0.66
TNFSF9-201ENST00000245817 A0A087WVE0 104 aa10.94□□□□□ -0.66
TNFSF9-201ENST00000245817 LINC00472Q9H8W2 130 aa10.93□□□□□ -0.66
TNFSF9-201ENST00000245817 FAM236AA0A1B0GUQ0 79 aa10.92□□□□□ -0.66
TNFSF9-201ENST00000245817 FAM236BA0A1B0GV22 79 aa10.92□□□□□ -0.66
TNFSF9-201ENST00000245817 J3KT08 172 aa10.92□□□□□ -0.66
TNFSF9-201ENST00000245817 Q8N9L7 120 aa10.91□□□□□ -0.66
TNFSF9-201ENST00000245817 DSCR10P59022 87 aa10.89□□□□□ -0.67
TNFSF9-201ENST00000245817 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
TNFSF9-201ENST00000245817 LIMD2Q9BT23 127 aa10.88□□□□□ -0.67
TNFSF9-201ENST00000245817 KRTAP4-5Q9BYR2 181 aa10.88□□□□□ -0.67
TNFSF9-201ENST00000245817 SPINK1P00995 79 aa10.86□□□□□ -0.67
TNFSF9-201ENST00000245817 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
TNFSF9-201ENST00000245817 K7EQZ3 153 aa10.85□□□□□ -0.67
TNFSF9-201ENST00000245817 NDUFB1O75438 58 aa10.85□□□□□ -0.67
TNFSF9-201ENST00000245817 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
TNFSF9-201ENST00000245817 Q96NJ1 140 aa10.85□□□□□ -0.67
TNFSF9-201ENST00000245817 A8MWP4 228 aa10.84□□□□□ -0.67
TNFSF9-201ENST00000245817 Q5XG85 94 aa10.84□□□□□ -0.67
TNFSF9-201ENST00000245817 PCP4P48539 62 aa10.83□□□□□ -0.68
TNFSF9-201ENST00000245817 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
TNFSF9-201ENST00000245817 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.68
TNFSF9-201ENST00000245817 ANAPC13Q9BS18 74 aa10.81□□□□□ -0.68
TNFSF9-201ENST00000245817 ATOX1O00244 68 aa10.8□□□□□ -0.68
TNFSF9-201ENST00000245817 PRR15Q8IV56 129 aa10.8□□□□□ -0.68
TNFSF9-201ENST00000245817 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
TNFSF9-201ENST00000245817 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
TNFSF9-201ENST00000245817 RPS29P62273 56 aaKnown RBP10.77□□□□□ -0.69
TNFSF9-201ENST00000245817 HCG22E2RYF7 251 aa10.75□□□□□ -0.69
TNFSF9-201ENST00000245817 FLG2Q5D862 2391 aaPredicted RBP10.74□□□□□ -0.69
TNFSF9-201ENST00000245817 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms