RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 C1orf137Q5JT78 98 aa13.63□□□□□ -0.23
GCA-201ENST00000233612 Q6ZVQ6 151 aa13.61□□□□□ -0.23
GCA-201ENST00000233612 PSORS1C2Q9UIG4 136 aa13.6□□□□□ -0.23
GCA-201ENST00000233612 IGKV3D-7A0A0C4DH55 119 aa13.59□□□□□ -0.23
GCA-201ENST00000233612 F8WEM9 126 aa13.59□□□□□ -0.23
GCA-201ENST00000233612 A0A1W2PNM2 257 aa13.58□□□□□ -0.24
GCA-201ENST00000233612 Q6ZSA8 131 aa13.57□□□□□ -0.24
GCA-201ENST00000233612 Q8NBF4 154 aa13.57□□□□□ -0.24
GCA-201ENST00000233612 SPRR4Q96PI1 79 aa13.57□□□□□ -0.24
GCA-201ENST00000233612 LCE6AA0A183 80 aa13.55□□□□□ -0.24
GCA-201ENST00000233612 FAM30AQ9NZY2 134 aa13.54□□□□□ -0.24
GCA-201ENST00000233612 CXCL6P80162 114 aa13.53□□□□□ -0.24
GCA-201ENST00000233612 ZNF861PO60384 105 aa13.52□□□□□ -0.25
GCA-201ENST00000233612 CIRBP-AS1Q8TBR5 109 aa13.52□□□□□ -0.25
GCA-201ENST00000233612 CRYGAP11844 174 aa13.51□□□□□ -0.25
GCA-201ENST00000233612 KRTAP10-1P60331 282 aa13.5□□□□□ -0.25
GCA-201ENST00000233612 IGFL1Q6UW32 110 aa13.5□□□□□ -0.25
GCA-201ENST00000233612 SRRM2Q9UQ35 2752 aaKnown RBP13.5□□□□□ -0.25
GCA-201ENST00000233612 LINC00483Q53H64 154 aa13.5□□□□□ -0.25
GCA-201ENST00000233612 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
GCA-201ENST00000233612 HAMPP81172 84 aa13.48□□□□□ -0.25
GCA-201ENST00000233612 ZNF706Q9Y5V0 76 aaPredicted RBP13.48□□□□□ -0.25
GCA-201ENST00000233612 NREPQ16612 68 aa13.47□□□□□ -0.25
GCA-201ENST00000233612 FAM236AA0A1B0GUQ0 79 aa13.47□□□□□ -0.25
GCA-201ENST00000233612 FAM236BA0A1B0GV22 79 aa13.47□□□□□ -0.25
GCA-201ENST00000233612 LINC00336Q6ZUF6 198 aa13.47□□□□□ -0.25
GCA-201ENST00000233612 ANAPC13Q9BS18 74 aa13.45□□□□□ -0.26
GCA-201ENST00000233612 IGLV7-43P04211 117 aa13.44□□□□□ -0.26
GCA-201ENST00000233612 SCXQ7RTU7 201 aa13.44□□□□□ -0.26
GCA-201ENST00000233612 RPL37AP61513 92 aaKnown RBP13.41□□□□□ -0.26
GCA-201ENST00000233612 LRP1BQ9NZR2 4599 aa13.4□□□□□ -0.26
GCA-201ENST00000233612 A0A087WVE0 104 aa13.4□□□□□ -0.26
GCA-201ENST00000233612 A0A0G2JQZ4 141 aa13.37□□□□□ -0.27
GCA-201ENST00000233612 ATOX1O00244 68 aa13.34□□□□□ -0.27
GCA-201ENST00000233612 BPY2O14599 106 aa13.34□□□□□ -0.27
GCA-201ENST00000233612 RYR2Q92736 4967 aa13.34□□□□□ -0.27
GCA-201ENST00000233612 A0A1B0GVY2 172 aa13.3□□□□□ -0.28
GCA-201ENST00000233612 A0A087WSZ3 146 aa13.28□□□□□ -0.28
GCA-201ENST00000233612 DYNC1H1Q14204 4646 aaKnown RBP13.27□□□□□ -0.28
GCA-201ENST00000233612 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
GCA-201ENST00000233612 IGKV4-1P06312 121 aa13.25□□□□□ -0.29
GCA-201ENST00000233612 C9orf153Q5TBE3 101 aa13.24□□□□□ -0.29
GCA-201ENST00000233612 PKHD1P08F94 4074 aa13.24□□□□□ -0.29
GCA-201ENST00000233612 DSCR10P59022 87 aa13.22□□□□□ -0.29
GCA-201ENST00000233612 KMT2CQ8NEZ4 4911 aaKnown RBP13.21□□□□□ -0.29
GCA-201ENST00000233612 ANAPC11Q9NYG5 84 aa13.21□□□□□ -0.3
GCA-201ENST00000233612 Q8N9L7 120 aa13.19□□□□□ -0.3
GCA-201ENST00000233612 COX7CP15954 63 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 MOBPQ13875 183 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 SERP2Q8N6R1 65 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 LINC00472Q9H8W2 130 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 VPS13BQ7Z7G8 4022 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 CCDC179H3BU77 68 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 UQCRQO14949 82 aa13.18□□□□□ -0.3
GCA-201ENST00000233612 SSBP3-AS1Q7Z2R9 100 aa13.15□□□□□ -0.3
GCA-201ENST00000233612 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.31
GCA-201ENST00000233612 FAM229BQ4G0N7 80 aa13.14□□□□□ -0.31
GCA-201ENST00000233612 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
GCA-201ENST00000233612 CD164Q04900 197 aa13.11□□□□□ -0.31
GCA-201ENST00000233612 SS18L2Q9UHA2 77 aa13.11□□□□□ -0.31
GCA-201ENST00000233612 K7EQZ3 153 aa13.1□□□□□ -0.31
GCA-201ENST00000233612 J3KT08 172 aa13.09□□□□□ -0.31
GCA-201ENST00000233612 TRAV7A0A075B6U4 112 aa13.08□□□□□ -0.31
GCA-201ENST00000233612 DEFB116Q30KQ4 102 aa13.07□□□□□ -0.32
GCA-201ENST00000233612 KRTAP1-4P0C5Y4 121 aa13.05□□□□□ -0.32
GCA-201ENST00000233612 Q96NJ1 140 aa13.05□□□□□ -0.32
GCA-201ENST00000233612 A8MWP4 228 aa13.04□□□□□ -0.32
GCA-201ENST00000233612 HRCT1Q6UXD1 115 aa13.03□□□□□ -0.32
GCA-201ENST00000233612 SPINK6Q6UWN8 80 aa13.02□□□□□ -0.32
GCA-201ENST00000233612 PRR15Q8IV56 129 aa13.02□□□□□ -0.32
GCA-201ENST00000233612 A0A087X002 238 aa13.02□□□□□ -0.33
GCA-201ENST00000233612 KRTAP13-2Q52LG2 175 aa13.02□□□□□ -0.33
GCA-201ENST00000233612 HCG22E2RYF7 251 aa12.99□□□□□ -0.33
GCA-201ENST00000233612 OCR1Q9BZK8 76 aa12.98□□□□□ -0.33
GCA-201ENST00000233612 ASB16-AS1Q495Z4 193 aa12.96□□□□□ -0.33
GCA-201ENST00000233612 NDUFB1O75438 58 aa12.93□□□□□ -0.34
GCA-201ENST00000233612 Q5XG85 94 aa12.93□□□□□ -0.34
GCA-201ENST00000233612 FAT1Q14517 4588 aa12.93□□□□□ -0.34
GCA-201ENST00000233612 KRTAP29-1A8MX34 341 aaPredicted RBP12.93□□□□□ -0.34
GCA-201ENST00000233612 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
GCA-201ENST00000233612 KRTAP10-4P60372 401 aaPredicted RBP12.92□□□□□ -0.34
GCA-201ENST00000233612 RYR3Q15413 4870 aa12.91□□□□□ -0.34
GCA-201ENST00000233612 SMR3BP02814 79 aaPredicted RBP12.91□□□□□ -0.34
GCA-201ENST00000233612 KLKP1Q107X0 134 aa12.85□□□□□ -0.35
GCA-201ENST00000233612 C20orf197Q8N268 126 aa12.85□□□□□ -0.35
GCA-201ENST00000233612 CASC2Q6XLA1 102 aa12.84□□□□□ -0.35
GCA-201ENST00000233612 MMP24-AS1A0A0U1RRL7 71 aa12.83□□□□□ -0.35
GCA-201ENST00000233612 WFDC13Q8IUB5 93 aa12.83□□□□□ -0.35
GCA-201ENST00000233612 A0A1B0GVX0 72 aa12.83□□□□□ -0.36
GCA-201ENST00000233612 CYSTM1Q9H1C7 97 aa12.82□□□□□ -0.36
GCA-201ENST00000233612 CDK2AP2O75956 126 aa12.81□□□□□ -0.36
GCA-201ENST00000233612 TYMSOSQ8TAI1 123 aa12.81□□□□□ -0.36
GCA-201ENST00000233612 C8orf17Q9NRJ1 99 aa12.78□□□□□ -0.36
GCA-201ENST00000233612 TMEM254Q8TBM7 123 aa12.77□□□□□ -0.36
GCA-201ENST00000233612 LIMD2Q9BT23 127 aa12.77□□□□□ -0.37
GCA-201ENST00000233612 PKHD1L1Q86WI1 4243 aa12.77□□□□□ -0.37
GCA-201ENST00000233612 hDV103S1A0JD37 113 aa12.76□□□□□ -0.37
GCA-201ENST00000233612 SPINK1P00995 79 aa12.76□□□□□ -0.37
GCA-201ENST00000233612 C5orf47Q569G3 176 aa12.75□□□□□ -0.37
GCA-201ENST00000233612 C4orf48Q5BLP8 95 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms