RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 SNCGO76070 127 aa11.12□□□□□ -0.63
CENPA-201ENST00000233505 TSPAN13O95857 204 aa11.12□□□□□ -0.63
CENPA-201ENST00000233505 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
CENPA-201ENST00000233505 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
CENPA-201ENST00000233505 SPINK1P00995 79 aa11.1□□□□□ -0.63
CENPA-201ENST00000233505 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
CENPA-201ENST00000233505 FAM218AQ96MZ4 157 aa11.09□□□□□ -0.63
CENPA-201ENST00000233505 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
CENPA-201ENST00000233505 COX6CP09669 75 aa11.07□□□□□ -0.64
CENPA-201ENST00000233505 PSMB2P49721 201 aa11.07□□□□□ -0.64
CENPA-201ENST00000233505 GHRHP01286 108 aa11.03□□□□□ -0.64
CENPA-201ENST00000233505 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
CENPA-201ENST00000233505 F8WEM9 126 aa11.02□□□□□ -0.65
CENPA-201ENST00000233505 CD164Q04900 197 aa11.02□□□□□ -0.65
CENPA-201ENST00000233505 IGLV8-61A0A075B6I0 122 aa11.01□□□□□ -0.65
CENPA-201ENST00000233505 CLEC2BQ92478 149 aa11.01□□□□□ -0.65
CENPA-201ENST00000233505 PRR4Q16378 134 aa10.99□□□□□ -0.65
CENPA-201ENST00000233505 SNHG12Q9BXW3 62 aa10.98□□□□□ -0.65
CENPA-201ENST00000233505 H3BQ85 93 aa10.97□□□□□ -0.65
CENPA-201ENST00000233505 DNAL4O96015 105 aa10.97□□□□□ -0.65
CENPA-201ENST00000233505 Q6JHZ5 121 aa10.97□□□□□ -0.65
CENPA-201ENST00000233505 TRACP01848 142 aa10.95□□□□□ -0.66
CENPA-201ENST00000233505 SCGB1C2P0DMR2 95 aa10.95□□□□□ -0.66
CENPA-201ENST00000233505 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
CENPA-201ENST00000233505 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
CENPA-201ENST00000233505 LPAP08519 4548 aa10.95□□□□□ -0.66
CENPA-201ENST00000233505 LST1O00453 97 aa10.94□□□□□ -0.66
CENPA-201ENST00000233505 LIMD2Q9BT23 127 aa10.94□□□□□ -0.66
CENPA-201ENST00000233505 Q5XG85 94 aa10.92□□□□□ -0.66
CENPA-201ENST00000233505 ORMDL1Q9P0S3 153 aa10.92□□□□□ -0.66
CENPA-201ENST00000233505 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
CENPA-201ENST00000233505 BATFQ16520 125 aa10.91□□□□□ -0.66
CENPA-201ENST00000233505 IGLV7-46A0A075B6I9 117 aa10.89□□□□□ -0.67
CENPA-201ENST00000233505 FABP2P12104 132 aa10.89□□□□□ -0.67
CENPA-201ENST00000233505 IGFL1Q6UW32 110 aa10.89□□□□□ -0.67
CENPA-201ENST00000233505 HRCT1Q6UXD1 115 aa10.89□□□□□ -0.67
CENPA-201ENST00000233505 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
CENPA-201ENST00000233505 LYRM7Q5U5X0 104 aa10.88□□□□□ -0.67
CENPA-201ENST00000233505 A0A0G2JQZ4 141 aa10.87□□□□□ -0.67
CENPA-201ENST00000233505 H3BUT2 72 aa10.86□□□□□ -0.67
CENPA-201ENST00000233505 TPRXLQ17RH7 258 aa10.86□□□□□ -0.67
CENPA-201ENST00000233505 NAA38Q9BRA0 125 aaKnown RBP10.86□□□□□ -0.67
CENPA-201ENST00000233505 ATXN8Q156A1 80 aa10.85□□□□□ -0.67
CENPA-201ENST00000233505 H3BMG7 143 aa10.84□□□□□ -0.67
CENPA-201ENST00000233505 UBE2V1Q13404 147 aa10.84□□□□□ -0.67
CENPA-201ENST00000233505 TCL1BO95988 128 aa10.83□□□□□ -0.68
CENPA-201ENST00000233505 Q6Q795 121 aa10.82□□□□□ -0.68
CENPA-201ENST00000233505 TRBV20-1A0A075B6N2 111 aa10.81□□□□□ -0.68
CENPA-201ENST00000233505 TRBV7-7A0A0K0K1E9 115 aa10.81□□□□□ -0.68
CENPA-201ENST00000233505 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
CENPA-201ENST00000233505 TAX1BP3O14907 124 aa10.81□□□□□ -0.68
CENPA-201ENST00000233505 ASB16-AS1Q495Z4 193 aa10.78□□□□□ -0.68
CENPA-201ENST00000233505 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
CENPA-201ENST00000233505 BAALC-AS2P0C853 105 aa10.76□□□□□ -0.69
CENPA-201ENST00000233505 KRTAP13-3Q3SY46 172 aa10.76□□□□□ -0.69
CENPA-201ENST00000233505 A0A1W2PPM0 123 aa10.75□□□□□ -0.69
CENPA-201ENST00000233505 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
CENPA-201ENST00000233505 COL5A1-AS1Q5SY13 56 aa10.74□□□□□ -0.69
CENPA-201ENST00000233505 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
CENPA-201ENST00000233505 CDIP1Q9H305 208 aa10.72□□□□□ -0.69
CENPA-201ENST00000233505 SS18L2Q9UHA2 77 aa10.71□□□□□ -0.69
CENPA-201ENST00000233505 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
CENPA-201ENST00000233505 A0A1W2PNM2 257 aa10.7□□□□□ -0.7
CENPA-201ENST00000233505 RBM3P98179 157 aaKnown RBP10.69□□□□□ -0.7
CENPA-201ENST00000233505 A0A1B0GV72 72 aa10.67□□□□□ -0.7
CENPA-201ENST00000233505 A0A087WSZ3 146 aa10.66□□□□□ -0.7
CENPA-201ENST00000233505 C9JAW5 83 aa10.66□□□□□ -0.7
CENPA-201ENST00000233505 MUC17Q685J3 4493 aa10.65□□□□□ -0.7
CENPA-201ENST00000233505 PCP4L1A6NKN8 68 aa10.65□□□□□ -0.7
CENPA-201ENST00000233505 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
CENPA-201ENST00000233505 DSCR8Q96T75 97 aa10.65□□□□□ -0.7
CENPA-201ENST00000233505 H3BT86 120 aa10.63□□□□□ -0.71
CENPA-201ENST00000233505 CCKP06307 115 aa10.63□□□□□ -0.71
CENPA-201ENST00000233505 MUC2Q02817 5179 aa10.62□□□□□ -0.71
CENPA-201ENST00000233505 SPCS1Q9Y6A9 102 aa10.62□□□□□ -0.71
CENPA-201ENST00000233505 LOC110117498A0A087WWA1 95 aa10.59□□□□□ -0.71
CENPA-201ENST00000233505 OBSCN-AS1Q96MR7 158 aa10.59□□□□□ -0.71
CENPA-201ENST00000233505 PDE6GP18545 87 aa10.58□□□□□ -0.72
CENPA-201ENST00000233505 C21orf62-AS1Q17RA5 79 aa10.58□□□□□ -0.72
CENPA-201ENST00000233505 XP32Q5T750 250 aa10.58□□□□□ -0.72
CENPA-201ENST00000233505 Q6ZQT0 140 aa10.55□□□□□ -0.72
CENPA-201ENST00000233505 Q96NJ1 140 aa10.55□□□□□ -0.72
CENPA-201ENST00000233505 A0A1B0GW54 56 aa10.54□□□□□ -0.72
CENPA-201ENST00000233505 VPS25Q9BRG1 176 aa10.54□□□□□ -0.72
CENPA-201ENST00000233505 K7EP34 96 aa10.53□□□□□ -0.72
CENPA-201ENST00000233505 C9orf92A6NGG3 77 aa10.52□□□□□ -0.73
CENPA-201ENST00000233505 MTURNQ8N3F0 131 aa10.51□□□□□ -0.73
CENPA-201ENST00000233505 C14orf132Q9NPU4 83 aa10.51□□□□□ -0.73
CENPA-201ENST00000233505 SEC61BP60468 96 aaKnown RBP10.49□□□□□ -0.73
CENPA-201ENST00000233505 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
CENPA-201ENST00000233505 GTF2H5Q6ZYL4 71 aa10.46□□□□□ -0.73
CENPA-201ENST00000233505 PRO0461Q9UI25 63 aa10.46□□□□□ -0.73
CENPA-201ENST00000233505 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
CENPA-201ENST00000233505 SIGMAR1Q99720 223 aa10.44□□□□□ -0.74
CENPA-201ENST00000233505 IGKV4-1P06312 121 aa10.43□□□□□ -0.74
CENPA-201ENST00000233505 J3KT08 172 aa10.39□□□□□ -0.75
CENPA-201ENST00000233505 RPL37P61927 97 aaKnown RBP10.39□□□□□ -0.75
CENPA-201ENST00000233505 FAT4Q6V0I7 4981 aa10.37□□□□□ -0.75
CENPA-201ENST00000233505 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
CENPA-201ENST00000233505 F8W1H4 67 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms