RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HECTD1Q9ULT8 2610 aa6.89□□□□□ -1.31
LAMA4-201ENST00000230538 MGAM2Q2M2H8 2515 aa6.89□□□□□ -1.31
LAMA4-201ENST00000230538 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
LAMA4-201ENST00000230538 OXTP01178 125 aa6.88□□□□□ -1.31
LAMA4-201ENST00000230538 RPL37P61927 97 aaKnown RBP6.88□□□□□ -1.31
LAMA4-201ENST00000230538 EPG5Q9HCE0 2579 aa6.87□□□□□ -1.31
LAMA4-201ENST00000230538 ROMO1P60602 79 aa6.87□□□□□ -1.31
LAMA4-201ENST00000230538 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
LAMA4-201ENST00000230538 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
LAMA4-201ENST00000230538 M0QZ58 72 aa6.85□□□□□ -1.31
LAMA4-201ENST00000230538 LCE6AA0A183 80 aa6.82□□□□□ -1.32
LAMA4-201ENST00000230538 FLNAP21333 2647 aaKnown RBP6.82□□□□□ -1.32
LAMA4-201ENST00000230538 PRRC2CQ9Y520 2896 aaKnown RBP6.82□□□□□ -1.32
LAMA4-201ENST00000230538 CEP350Q5VT06 3117 aa6.81□□□□□ -1.32
LAMA4-201ENST00000230538 Q6ZR54 194 aa6.8□□□□□ -1.32
LAMA4-201ENST00000230538 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
LAMA4-201ENST00000230538 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
LAMA4-201ENST00000230538 PANO1I0J062 215 aa6.77□□□□□ -1.32
LAMA4-201ENST00000230538 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
LAMA4-201ENST00000230538 KRTAP4-16G5E9R7 235 aaPredicted RBP6.76□□□□□ -1.33
LAMA4-201ENST00000230538 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
LAMA4-201ENST00000230538 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
LAMA4-201ENST00000230538 CHD7Q9P2D1 2997 aa6.75□□□□□ -1.33
LAMA4-201ENST00000230538 KRTAP29-1A8MX34 341 aaPredicted RBP6.73□□□□□ -1.33
LAMA4-201ENST00000230538 PCNTO95613 3336 aa6.73□□□□□ -1.33
LAMA4-201ENST00000230538 A0A087X002 238 aa6.72□□□□□ -1.33
LAMA4-201ENST00000230538 ATRQ13535 2644 aa6.71□□□□□ -1.34
LAMA4-201ENST00000230538 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
LAMA4-201ENST00000230538 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
LAMA4-201ENST00000230538 MAST4O15021 2626 aa6.64□□□□□ -1.35
LAMA4-201ENST00000230538 MKI67P46013 3256 aaKnown RBP6.64□□□□□ -1.35
LAMA4-201ENST00000230538 KRTAP11-1Q8IUC1 163 aa6.64□□□□□ -1.35
LAMA4-201ENST00000230538 HELZ2Q9BYK8 2649 aaKnown RBP6.64□□□□□ -1.35
LAMA4-201ENST00000230538 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
LAMA4-201ENST00000230538 RPS29P62273 56 aaKnown RBP6.59□□□□□ -1.35
LAMA4-201ENST00000230538 HTTP42858 3142 aa6.59□□□□□ -1.36
LAMA4-201ENST00000230538 CFAP46Q8IYW2 2715 aa6.58□□□□□ -1.36
LAMA4-201ENST00000230538 CHD9Q3L8U1 2897 aa6.58□□□□□ -1.36
LAMA4-201ENST00000230538 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
LAMA4-201ENST00000230538 A8MUU9 505 aa6.55□□□□□ -1.36
LAMA4-201ENST00000230538 A8MU10 97 aa6.55□□□□□ -1.36
LAMA4-201ENST00000230538 Q6ZRN7 208 aaPredicted RBP6.53□□□□□ -1.36
LAMA4-201ENST00000230538 CFAP54Q96N23 3096 aa6.53□□□□□ -1.36
LAMA4-201ENST00000230538 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
LAMA4-201ENST00000230538 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
LAMA4-201ENST00000230538 A6NN06 94 aa6.51□□□□□ -1.37
LAMA4-201ENST00000230538 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
LAMA4-201ENST00000230538 NBEAL1Q6ZS30 2694 aa6.49□□□□□ -1.37
LAMA4-201ENST00000230538 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
LAMA4-201ENST00000230538 A0A0C4DFX4 3053 aa6.48□□□□□ -1.37
LAMA4-201ENST00000230538 CHD6Q8TD26 2715 aa6.48□□□□□ -1.37
LAMA4-201ENST00000230538 STAB1Q9NY15 2570 aa6.47□□□□□ -1.37
LAMA4-201ENST00000230538 AKAP13Q12802 2813 aa6.46□□□□□ -1.37
LAMA4-201ENST00000230538 BRCA2P51587 3418 aa6.46□□□□□ -1.38
LAMA4-201ENST00000230538 KRTAP13-1Q8IUC0 172 aa6.45□□□□□ -1.38
LAMA4-201ENST00000230538 TEX15Q9BXT5 2789 aa6.44□□□□□ -1.38
LAMA4-201ENST00000230538 DMBT1Q9UGM3 2413 aaPredicted RBP6.43□□□□□ -1.38
LAMA4-201ENST00000230538 TRIOO75962 3097 aa6.42□□□□□ -1.38
LAMA4-201ENST00000230538 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
LAMA4-201ENST00000230538 TRANK1O15050 2925 aa6.41□□□□□ -1.38
LAMA4-201ENST00000230538 LAMA3Q16787 3333 aa6.4□□□□□ -1.38
LAMA4-201ENST00000230538 MGAQ8IWI9 3026 aa6.39□□□□□ -1.39
LAMA4-201ENST00000230538 GCN1Q92616 2671 aaKnown RBP6.38□□□□□ -1.39
LAMA4-201ENST00000230538 CENPEQ02224 2701 aa6.38□□□□□ -1.39
LAMA4-201ENST00000230538 XIRP2A4UGR9 3374 aa6.37□□□□□ -1.39
LAMA4-201ENST00000230538 DNAH14Q0VDD8 3507 aa6.36□□□□□ -1.39
LAMA4-201ENST00000230538 TNP1P09430 55 aa6.36□□□□□ -1.39
LAMA4-201ENST00000230538 LAMA2P24043 3122 aaKnown RBP6.35□□□□□ -1.39
LAMA4-201ENST00000230538 CDH23Q9H251 3354 aa6.35□□□□□ -1.39
LAMA4-201ENST00000230538 UNC79Q9P2D8 2635 aa6.34□□□□□ -1.39
LAMA4-201ENST00000230538 RANBP2P49792 3224 aaKnown RBP6.33□□□□□ -1.4
LAMA4-201ENST00000230538 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
LAMA4-201ENST00000230538 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
LAMA4-201ENST00000230538 CELSR3Q9NYQ7 3312 aa6.31□□□□□ -1.4
LAMA4-201ENST00000230538 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
LAMA4-201ENST00000230538 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
LAMA4-201ENST00000230538 COL6A5A8TX70 2615 aa6.26□□□□□ -1.41
LAMA4-201ENST00000230538 PRUNE2Q8WUY3 3088 aa6.25□□□□□ -1.41
LAMA4-201ENST00000230538 WDFY4Q6ZS81 3184 aa6.24□□□□□ -1.41
LAMA4-201ENST00000230538 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
LAMA4-201ENST00000230538 FREM2Q5SZK8 3169 aa6.22□□□□□ -1.41
LAMA4-201ENST00000230538 ZNF292O60281 2723 aa6.21□□□□□ -1.41
LAMA4-201ENST00000230538 SETXQ7Z333 2677 aaKnown RBP6.21□□□□□ -1.41
LAMA4-201ENST00000230538 COL6A3P12111 3177 aa6.2□□□□□ -1.42
LAMA4-201ENST00000230538 FRYQ5TBA9 3013 aa6.2□□□□□ -1.42
LAMA4-201ENST00000230538 SZT2Q5T011 3432 aa6.18□□□□□ -1.42
LAMA4-201ENST00000230538 STAB2Q8WWQ8 2551 aa6.18□□□□□ -1.42
LAMA4-201ENST00000230538 KRTAP10-8P60410 259 aa6.16□□□□□ -1.42
LAMA4-201ENST00000230538 XP32Q5T750 250 aa6.16□□□□□ -1.42
LAMA4-201ENST00000230538 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
LAMA4-201ENST00000230538 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
LAMA4-201ENST00000230538 ITPR2Q14571 2701 aa6.15□□□□□ -1.42
LAMA4-201ENST00000230538 A0A1B0GVY2 172 aa6.15□□□□□ -1.43
LAMA4-201ENST00000230538 VPS13AQ96RL7 3174 aa6.14□□□□□ -1.43
LAMA4-201ENST00000230538 IGSF10Q6WRI0 2623 aa6.13□□□□□ -1.43
LAMA4-201ENST00000230538 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
LAMA4-201ENST00000230538 VCANP13611 3396 aa6.12□□□□□ -1.43
LAMA4-201ENST00000230538 KMT2BQ9UMN6 2715 aaPredicted RBP6.11□□□□□ -1.43
LAMA4-201ENST00000230538 BAHCC1Q9P281 2608 aa6.11□□□□□ -1.43
LAMA4-201ENST00000230538 NSD1Q96L73 2696 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms