RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
TVP23C-201ENST00000225576 XGP55808 180 aa10.23□□□□□ -0.77
TVP23C-201ENST00000225576 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
TVP23C-201ENST00000225576 F8WEM9 126 aa10.23□□□□□ -0.77
TVP23C-201ENST00000225576 LINC00846Q9NV44 126 aa10.23□□□□□ -0.77
TVP23C-201ENST00000225576 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
TVP23C-201ENST00000225576 IGLV8-61A0A075B6I0 122 aa10.21□□□□□ -0.78
TVP23C-201ENST00000225576 HAMPP81172 84 aa10.21□□□□□ -0.78
TVP23C-201ENST00000225576 SPRR4Q96PI1 79 aa10.21□□□□□ -0.78
TVP23C-201ENST00000225576 PKD1P98161 4303 aa10.21□□□□□ -0.78
TVP23C-201ENST00000225576 DNAH8Q96JB1 4490 aa10.2□□□□□ -0.78
TVP23C-201ENST00000225576 LINC00643Q86TS7 51 aa10.19□□□□□ -0.78
TVP23C-201ENST00000225576 MT-ATP8P03928 68 aa10.18□□□□□ -0.78
TVP23C-201ENST00000225576 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
TVP23C-201ENST00000225576 HERC2O95714 4834 aa10.17□□□□□ -0.78
TVP23C-201ENST00000225576 A0A1B0GW54 56 aa10.16□□□□□ -0.78
TVP23C-201ENST00000225576 A0A1W2PNM2 257 aa10.14□□□□□ -0.79
TVP23C-201ENST00000225576 Q6JHZ5 121 aa10.14□□□□□ -0.79
TVP23C-201ENST00000225576 UBL5Q9BZL1 73 aa10.14□□□□□ -0.79
TVP23C-201ENST00000225576 Q8NBF4 154 aa10.13□□□□□ -0.79
TVP23C-201ENST00000225576 IGFL1Q6UW32 110 aa10.12□□□□□ -0.79
TVP23C-201ENST00000225576 CRYGAP11844 174 aa10.08□□□□□ -0.8
TVP23C-201ENST00000225576 Q6ZVQ6 151 aa10.08□□□□□ -0.8
TVP23C-201ENST00000225576 TRBV7-7A0A0K0K1E9 115 aa10.07□□□□□ -0.8
TVP23C-201ENST00000225576 RPL37AP61513 92 aaKnown RBP10.07□□□□□ -0.8
TVP23C-201ENST00000225576 PCLOQ9Y6V0 5065 aa10.07□□□□□ -0.8
TVP23C-201ENST00000225576 ATP5EP2Q5VTU8 51 aa10.07□□□□□ -0.8
TVP23C-201ENST00000225576 Q6Q795 121 aa10.07□□□□□ -0.8
TVP23C-201ENST00000225576 IMUPQ9GZP8 106 aa10.07□□□□□ -0.8
TVP23C-201ENST00000225576 A0A0G2JQZ4 141 aa10.06□□□□□ -0.8
TVP23C-201ENST00000225576 PKHD1P08F94 4074 aa10.05□□□□□ -0.8
TVP23C-201ENST00000225576 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
TVP23C-201ENST00000225576 RYR1P21817 5038 aa10.05□□□□□ -0.8
TVP23C-201ENST00000225576 SCGB1A1P11684 91 aa10.04□□□□□ -0.8
TVP23C-201ENST00000225576 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
TVP23C-201ENST00000225576 NREPQ16612 68 aa10.03□□□□□ -0.8
TVP23C-201ENST00000225576 C9orf153Q5TBE3 101 aa10.03□□□□□ -0.8
TVP23C-201ENST00000225576 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
TVP23C-201ENST00000225576 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.8
TVP23C-201ENST00000225576 LRP1BQ9NZR2 4599 aa10.02□□□□□ -0.81
TVP23C-201ENST00000225576 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
TVP23C-201ENST00000225576 CXCL6P80162 114 aa9.99□□□□□ -0.81
TVP23C-201ENST00000225576 MOBPQ13875 183 aa9.99□□□□□ -0.81
TVP23C-201ENST00000225576 FAM229BQ4G0N7 80 aa9.98□□□□□ -0.81
TVP23C-201ENST00000225576 A0A087WSZ3 146 aa9.97□□□□□ -0.81
TVP23C-201ENST00000225576 SPINK6Q6UWN8 80 aa9.97□□□□□ -0.81
TVP23C-201ENST00000225576 DYNC1H1Q14204 4646 aaKnown RBP9.97□□□□□ -0.81
TVP23C-201ENST00000225576 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.82
TVP23C-201ENST00000225576 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.82
TVP23C-201ENST00000225576 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
TVP23C-201ENST00000225576 BPY2O14599 106 aa9.92□□□□□ -0.82
TVP23C-201ENST00000225576 KRTAP10-4P60372 401 aaPredicted RBP9.92□□□□□ -0.82
TVP23C-201ENST00000225576 A0A087X002 238 aa9.91□□□□□ -0.82
TVP23C-201ENST00000225576 CDK2AP2O75956 126 aa9.91□□□□□ -0.82
TVP23C-201ENST00000225576 HIST1H4AP62805 103 aaKnown RBP9.91□□□□□ -0.82
TVP23C-201ENST00000225576 CD164Q04900 197 aa9.89□□□□□ -0.83
TVP23C-201ENST00000225576 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
TVP23C-201ENST00000225576 PLA2G1BP04054 148 aaKnown RBP9.87□□□□□ -0.83
TVP23C-201ENST00000225576 A0A087WVE0 104 aa9.87□□□□□ -0.83
TVP23C-201ENST00000225576 HRCT1Q6UXD1 115 aa9.87□□□□□ -0.83
TVP23C-201ENST00000225576 FAM236AA0A1B0GUQ0 79 aa9.86□□□□□ -0.83
TVP23C-201ENST00000225576 FAM236BA0A1B0GV22 79 aa9.86□□□□□ -0.83
TVP23C-201ENST00000225576 PCP4P48539 62 aa9.86□□□□□ -0.83
TVP23C-201ENST00000225576 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
TVP23C-201ENST00000225576 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
TVP23C-201ENST00000225576 ABCA13Q86UQ4 5058 aa9.85□□□□□ -0.83
TVP23C-201ENST00000225576 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
TVP23C-201ENST00000225576 VPS13BQ7Z7G8 4022 aa9.83□□□□□ -0.84
TVP23C-201ENST00000225576 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
TVP23C-201ENST00000225576 DSCR10P59022 87 aa9.83□□□□□ -0.84
TVP23C-201ENST00000225576 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
TVP23C-201ENST00000225576 Q8N9L7 120 aa9.81□□□□□ -0.84
TVP23C-201ENST00000225576 DEFB116Q30KQ4 102 aa9.8□□□□□ -0.84
TVP23C-201ENST00000225576 J3KT08 172 aa9.79□□□□□ -0.84
TVP23C-201ENST00000225576 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
TVP23C-201ENST00000225576 Q96NJ1 140 aa9.78□□□□□ -0.84
TVP23C-201ENST00000225576 HSPG2P98160 4391 aa9.78□□□□□ -0.84
TVP23C-201ENST00000225576 K7EQZ3 153 aa9.76□□□□□ -0.85
TVP23C-201ENST00000225576 ATOX1O00244 68 aa9.76□□□□□ -0.85
TVP23C-201ENST00000225576 PRR26Q8N8Z3 221 aa9.76□□□□□ -0.85
TVP23C-201ENST00000225576 ANAPC13Q9BS18 74 aa9.76□□□□□ -0.85
TVP23C-201ENST00000225576 ASB16-AS1Q495Z4 193 aa9.75□□□□□ -0.85
TVP23C-201ENST00000225576 Q5XG85 94 aa9.75□□□□□ -0.85
TVP23C-201ENST00000225576 A8MWP4 228 aa9.74□□□□□ -0.85
TVP23C-201ENST00000225576 Q5VSD8 79 aa9.74□□□□□ -0.85
TVP23C-201ENST00000225576 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
TVP23C-201ENST00000225576 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
TVP23C-201ENST00000225576 FAT1Q14517 4588 aa9.7□□□□□ -0.86
TVP23C-201ENST00000225576 SPINK1P00995 79 aa9.7□□□□□ -0.86
TVP23C-201ENST00000225576 NDUFB1O75438 58 aa9.69□□□□□ -0.86
TVP23C-201ENST00000225576 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
TVP23C-201ENST00000225576 SPAG11AQ6PDA7 123 aa9.68□□□□□ -0.86
TVP23C-201ENST00000225576 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
TVP23C-201ENST00000225576 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
TVP23C-201ENST00000225576 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
TVP23C-201ENST00000225576 Q8N1X5 172 aa9.66□□□□□ -0.86
TVP23C-201ENST00000225576 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
TVP23C-201ENST00000225576 KRTAP4-5Q9BYR2 181 aa9.64□□□□□ -0.87
TVP23C-201ENST00000225576 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
TVP23C-201ENST00000225576 C1orf195Q5TG92 126 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms