RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 SSBP3-AS1Q7Z2R9 100 aa11.47□□□□□ -0.57
HOXA6-201ENST00000222728 A0A1B0GX51 115 aa11.45□□□□□ -0.58
HOXA6-201ENST00000222728 C4orf48Q5BLP8 95 aa11.43□□□□□ -0.58
HOXA6-201ENST00000222728 PCP4L1A6NKN8 68 aa11.42□□□□□ -0.58
HOXA6-201ENST00000222728 OCIAD2Q56VL3 154 aa11.41□□□□□ -0.58
HOXA6-201ENST00000222728 SNHG12Q9BXW3 62 aa11.41□□□□□ -0.58
HOXA6-201ENST00000222728 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
HOXA6-201ENST00000222728 F8WEM9 126 aa11.4□□□□□ -0.58
HOXA6-201ENST00000222728 DNAL4O96015 105 aa11.4□□□□□ -0.58
HOXA6-201ENST00000222728 SPAG11AQ6PDA7 123 aa11.4□□□□□ -0.58
HOXA6-201ENST00000222728 PPDPFLQ8WWR9 84 aa11.4□□□□□ -0.58
HOXA6-201ENST00000222728 LST1O00453 97 aa11.39□□□□□ -0.59
HOXA6-201ENST00000222728 TAX1BP3O14907 124 aa11.38□□□□□ -0.59
HOXA6-201ENST00000222728 HRCT1Q6UXD1 115 aa11.38□□□□□ -0.59
HOXA6-201ENST00000222728 H3BUT2 72 aa11.37□□□□□ -0.59
HOXA6-201ENST00000222728 FABP2P12104 132 aa11.37□□□□□ -0.59
HOXA6-201ENST00000222728 TCL1BO95988 128 aa11.36□□□□□ -0.59
HOXA6-201ENST00000222728 ORMDL1Q9P0S3 153 aa11.36□□□□□ -0.59
HOXA6-201ENST00000222728 SPINK1P00995 79 aa11.35□□□□□ -0.59
HOXA6-201ENST00000222728 TRACP01848 142 aa11.35□□□□□ -0.59
HOXA6-201ENST00000222728 RETNLBQ9BQ08 111 aa11.35□□□□□ -0.59
HOXA6-201ENST00000222728 HMCN2Q8NDA2 5059 aa11.34□□□□□ -0.59
HOXA6-201ENST00000222728 C9orf118A6NHY6 69 aa11.34□□□□□ -0.59
HOXA6-201ENST00000222728 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
HOXA6-201ENST00000222728 GHRHP01286 108 aa11.32□□□□□ -0.6
HOXA6-201ENST00000222728 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
HOXA6-201ENST00000222728 ATXN8Q156A1 80 aa11.31□□□□□ -0.6
HOXA6-201ENST00000222728 PRR4Q16378 134 aa11.3□□□□□ -0.6
HOXA6-201ENST00000222728 LYRM7Q5U5X0 104 aa11.3□□□□□ -0.6
HOXA6-201ENST00000222728 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
HOXA6-201ENST00000222728 A0A1B0GV72 72 aa11.28□□□□□ -0.6
HOXA6-201ENST00000222728 COL5A1-AS1Q5SY13 56 aa11.28□□□□□ -0.6
HOXA6-201ENST00000222728 Q6JHZ5 121 aa11.28□□□□□ -0.6
HOXA6-201ENST00000222728 A0A1W2PPM0 123 aa11.27□□□□□ -0.61
HOXA6-201ENST00000222728 TMEM256-PLSCR3K7ERE1 68 aa11.27□□□□□ -0.61
HOXA6-201ENST00000222728 H3BMG7 143 aa11.26□□□□□ -0.61
HOXA6-201ENST00000222728 RPS29P62273 56 aaKnown RBP11.26□□□□□ -0.61
HOXA6-201ENST00000222728 CD164Q04900 197 aa11.26□□□□□ -0.61
HOXA6-201ENST00000222728 H3BQ85 93 aa11.25□□□□□ -0.61
HOXA6-201ENST00000222728 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
HOXA6-201ENST00000222728 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
HOXA6-201ENST00000222728 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
HOXA6-201ENST00000222728 LIMD2Q9BT23 127 aa11.21□□□□□ -0.61
HOXA6-201ENST00000222728 LPAP08519 4548 aa11.19□□□□□ -0.62
HOXA6-201ENST00000222728 C9JAW5 83 aa11.19□□□□□ -0.62
HOXA6-201ENST00000222728 ANKRD29Q8N6D5 301 aa11.18□□□□□ -0.62
HOXA6-201ENST00000222728 IGLV7-46A0A075B6I9 117 aa11.16□□□□□ -0.62
HOXA6-201ENST00000222728 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
HOXA6-201ENST00000222728 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
HOXA6-201ENST00000222728 MTURNQ8N3F0 131 aa11.15□□□□□ -0.62
HOXA6-201ENST00000222728 LRP2P98164 4655 aa11.14□□□□□ -0.63
HOXA6-201ENST00000222728 FP248Q71RG6 208 aaPredicted RBP11.13□□□□□ -0.63
HOXA6-201ENST00000222728 Q5XG85 94 aa11.12□□□□□ -0.63
HOXA6-201ENST00000222728 A0A1W2PNM2 257 aa11.11□□□□□ -0.63
HOXA6-201ENST00000222728 RBM3P98179 157 aaKnown RBP11.11□□□□□ -0.63
HOXA6-201ENST00000222728 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
HOXA6-201ENST00000222728 Q6Q795 121 aa11.1□□□□□ -0.63
HOXA6-201ENST00000222728 C1orf195Q5TG92 126 aa11.08□□□□□ -0.64
HOXA6-201ENST00000222728 TRBV7-4A0A0J9YYF1 115 aa11.07□□□□□ -0.64
HOXA6-201ENST00000222728 DSCR8Q96T75 97 aa11.07□□□□□ -0.64
HOXA6-201ENST00000222728 A0A087WSZ3 146 aa11.06□□□□□ -0.64
HOXA6-201ENST00000222728 K7EP34 96 aa11.06□□□□□ -0.64
HOXA6-201ENST00000222728 CCKP06307 115 aa11.06□□□□□ -0.64
HOXA6-201ENST00000222728 H3BT86 120 aa11.05□□□□□ -0.64
HOXA6-201ENST00000222728 VPS25Q9BRG1 176 aa11.05□□□□□ -0.64
HOXA6-201ENST00000222728 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
HOXA6-201ENST00000222728 TPRXLQ17RH7 258 aa11.02□□□□□ -0.65
HOXA6-201ENST00000222728 ASB16-AS1Q495Z4 193 aa11.02□□□□□ -0.65
HOXA6-201ENST00000222728 KRTAP13-3Q3SY46 172 aa11.01□□□□□ -0.65
HOXA6-201ENST00000222728 C14orf132Q9NPU4 83 aa11.01□□□□□ -0.65
HOXA6-201ENST00000222728 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
HOXA6-201ENST00000222728 SMCPP49901 116 aaPredicted RBP10.99□□□□□ -0.65
HOXA6-201ENST00000222728 OBSCN-AS1Q96MR7 158 aa10.98□□□□□ -0.65
HOXA6-201ENST00000222728 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
HOXA6-201ENST00000222728 Q6ZQT0 140 aa10.97□□□□□ -0.65
HOXA6-201ENST00000222728 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
HOXA6-201ENST00000222728 LOC110117498A0A087WWA1 95 aa10.96□□□□□ -0.65
HOXA6-201ENST00000222728 GTF2H5Q6ZYL4 71 aa10.96□□□□□ -0.65
HOXA6-201ENST00000222728 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
HOXA6-201ENST00000222728 C9orf92A6NGG3 77 aa10.93□□□□□ -0.66
HOXA6-201ENST00000222728 Q96NJ1 140 aa10.93□□□□□ -0.66
HOXA6-201ENST00000222728 PDE6GP18545 87 aa10.91□□□□□ -0.66
HOXA6-201ENST00000222728 DEFB116Q30KQ4 102 aa10.87□□□□□ -0.67
HOXA6-201ENST00000222728 SIGMAR1Q99720 223 aa10.85□□□□□ -0.67
HOXA6-201ENST00000222728 XP32Q5T750 250 aa10.84□□□□□ -0.67
HOXA6-201ENST00000222728 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
HOXA6-201ENST00000222728 IGKV4-1P06312 121 aa10.83□□□□□ -0.68
HOXA6-201ENST00000222728 F8W1H4 67 aa10.82□□□□□ -0.68
HOXA6-201ENST00000222728 MUC17Q685J3 4493 aa10.81□□□□□ -0.68
HOXA6-201ENST00000222728 A0A1B0GV90 55 aa10.81□□□□□ -0.68
HOXA6-201ENST00000222728 C21orf62-AS1Q17RA5 79 aa10.81□□□□□ -0.68
HOXA6-201ENST00000222728 A0A1B0GW54 56 aa10.79□□□□□ -0.68
HOXA6-201ENST00000222728 ETDBQ3ZM63 59 aa10.77□□□□□ -0.69
HOXA6-201ENST00000222728 RNF213Q63HN8 5207 aa10.75□□□□□ -0.69
HOXA6-201ENST00000222728 DSCR10P59022 87 aa10.72□□□□□ -0.69
HOXA6-201ENST00000222728 NREPQ16612 68 aa10.72□□□□□ -0.69
HOXA6-201ENST00000222728 IGHV6-1A0A0B4J1U7 121 aa10.69□□□□□ -0.7
HOXA6-201ENST00000222728 J3KT08 172 aa10.69□□□□□ -0.7
HOXA6-201ENST00000222728 SEC61BP60468 96 aaKnown RBP10.67□□□□□ -0.7
HOXA6-201ENST00000222728 NOTCH2NLQ7Z3S9 236 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms