RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
SIPA1L3-201ENST00000222345 A0A087X002 238 aa8.43□□□□□ -1.06
SIPA1L3-201ENST00000222345 CASC10Q5T4H9 136 aa8.41□□□□□ -1.06
SIPA1L3-201ENST00000222345 KRTAP25-1Q3LHN0 102 aa8.41□□□□□ -1.06
SIPA1L3-201ENST00000222345 M0R2T5 61 aa8.4□□□□□ -1.07
SIPA1L3-201ENST00000222345 UTRNP46939 3433 aa8.39□□□□□ -1.07
SIPA1L3-201ENST00000222345 R4GN34 69 aa8.38□□□□□ -1.07
SIPA1L3-201ENST00000222345 DMBT1Q9UGM3 2413 aaPredicted RBP8.38□□□□□ -1.07
SIPA1L3-201ENST00000222345 NBEAL1Q6ZS30 2694 aa8.35□□□□□ -1.07
SIPA1L3-201ENST00000222345 CEP350Q5VT06 3117 aa8.35□□□□□ -1.07
SIPA1L3-201ENST00000222345 KRTAP26-1Q6PEX3 210 aa8.33□□□□□ -1.08
SIPA1L3-201ENST00000222345 Q8NDZ9 215 aa8.33□□□□□ -1.08
SIPA1L3-201ENST00000222345 PCNTO95613 3336 aa8.32□□□□□ -1.08
SIPA1L3-201ENST00000222345 C5orf42Q9H799 3197 aa8.31□□□□□ -1.08
SIPA1L3-201ENST00000222345 PLAC8Q9NZF1 115 aa8.29□□□□□ -1.08
SIPA1L3-201ENST00000222345 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
SIPA1L3-201ENST00000222345 FLNAP21333 2647 aaKnown RBP8.27□□□□□ -1.09
SIPA1L3-201ENST00000222345 LCE6AA0A183 80 aa8.26□□□□□ -1.09
SIPA1L3-201ENST00000222345 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
SIPA1L3-201ENST00000222345 NDUFAF8A1L188 74 aa8.21□□□□□ -1.1
SIPA1L3-201ENST00000222345 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.1
SIPA1L3-201ENST00000222345 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
SIPA1L3-201ENST00000222345 PLAC4Q8WY50 150 aa8.18□□□□□ -1.1
SIPA1L3-201ENST00000222345 ATRQ13535 2644 aa8.18□□□□□ -1.1
SIPA1L3-201ENST00000222345 M0QZ58 72 aa8.17□□□□□ -1.1
SIPA1L3-201ENST00000222345 PANO1I0J062 215 aa8.16□□□□□ -1.1
SIPA1L3-201ENST00000222345 KRTAP1-3Q8IUG1 177 aa8.16□□□□□ -1.1
SIPA1L3-201ENST00000222345 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
SIPA1L3-201ENST00000222345 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
SIPA1L3-201ENST00000222345 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
SIPA1L3-201ENST00000222345 GCN1Q92616 2671 aaKnown RBP8.13□□□□□ -1.11
SIPA1L3-201ENST00000222345 MAST4O15021 2626 aa8.12□□□□□ -1.11
SIPA1L3-201ENST00000222345 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
SIPA1L3-201ENST00000222345 FLNBO75369 2602 aaKnown RBP8.11□□□□□ -1.11
SIPA1L3-201ENST00000222345 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
SIPA1L3-201ENST00000222345 KRTAP1-1Q07627 177 aa8.09□□□□□ -1.11
SIPA1L3-201ENST00000222345 UNC79Q9P2D8 2635 aa8.07□□□□□ -1.12
SIPA1L3-201ENST00000222345 A0A0C4DFX4 3053 aa8.06□□□□□ -1.12
SIPA1L3-201ENST00000222345 KMT2BQ9UMN6 2715 aaPredicted RBP8.05□□□□□ -1.12
SIPA1L3-201ENST00000222345 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
SIPA1L3-201ENST00000222345 LAMA2P24043 3122 aaKnown RBP8.02□□□□□ -1.12
SIPA1L3-201ENST00000222345 HELZ2Q9BYK8 2649 aaKnown RBP8.02□□□□□ -1.13
SIPA1L3-201ENST00000222345 NOTCH1P46531 2555 aa8.01□□□□□ -1.13
SIPA1L3-201ENST00000222345 CFAP54Q96N23 3096 aa8.01□□□□□ -1.13
SIPA1L3-201ENST00000222345 STAB1Q9NY15 2570 aa7.99□□□□□ -1.13
SIPA1L3-201ENST00000222345 A8MUU9 505 aa7.97□□□□□ -1.13
SIPA1L3-201ENST00000222345 Q5VSD8 79 aa7.97□□□□□ -1.13
SIPA1L3-201ENST00000222345 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
SIPA1L3-201ENST00000222345 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
SIPA1L3-201ENST00000222345 A8MU10 97 aa7.92□□□□□ -1.14
SIPA1L3-201ENST00000222345 STAB2Q8WWQ8 2551 aa7.91□□□□□ -1.14
SIPA1L3-201ENST00000222345 XIRP2A4UGR9 3374 aa7.9□□□□□ -1.14
SIPA1L3-201ENST00000222345 TEX15Q9BXT5 2789 aa7.9□□□□□ -1.14
SIPA1L3-201ENST00000222345 COL6A5A8TX70 2615 aa7.89□□□□□ -1.15
SIPA1L3-201ENST00000222345 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
SIPA1L3-201ENST00000222345 APCP25054 2843 aa7.87□□□□□ -1.15
SIPA1L3-201ENST00000222345 PP632Q6XCG6 107 aa7.86□□□□□ -1.15
SIPA1L3-201ENST00000222345 MKI67P46013 3256 aaKnown RBP7.81□□□□□ -1.16
SIPA1L3-201ENST00000222345 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
SIPA1L3-201ENST00000222345 ITPR1Q14643 2758 aa7.8□□□□□ -1.16
SIPA1L3-201ENST00000222345 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
SIPA1L3-201ENST00000222345 REV3LO60673 3130 aa7.79□□□□□ -1.16
SIPA1L3-201ENST00000222345 KRTAP10-2P60368 255 aa7.77□□□□□ -1.17
SIPA1L3-201ENST00000222345 TNP1P09430 55 aa7.77□□□□□ -1.17
SIPA1L3-201ENST00000222345 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
SIPA1L3-201ENST00000222345 NBEAL2Q6ZNJ1 2754 aa7.75□□□□□ -1.17
SIPA1L3-201ENST00000222345 PRUNE2Q8WUY3 3088 aa7.74□□□□□ -1.17
SIPA1L3-201ENST00000222345 TEP1Q99973 2627 aaKnown RBP7.72□□□□□ -1.17
SIPA1L3-201ENST00000222345 VPS13AQ96RL7 3174 aa7.7□□□□□ -1.18
SIPA1L3-201ENST00000222345 CELSR3Q9NYQ7 3312 aa7.69□□□□□ -1.18
SIPA1L3-201ENST00000222345 BAHCC1Q9P281 2608 aa7.69□□□□□ -1.18
SIPA1L3-201ENST00000222345 ITPR2Q14571 2701 aa7.66□□□□□ -1.18
SIPA1L3-201ENST00000222345 MGAQ8IWI9 3026 aa7.66□□□□□ -1.18
SIPA1L3-201ENST00000222345 CHD7Q9P2D1 2997 aa7.64□□□□□ -1.19
SIPA1L3-201ENST00000222345 MAP1AP78559 2803 aaPredicted RBP7.64□□□□□ -1.19
SIPA1L3-201ENST00000222345 P0C880 135 aa7.64□□□□□ -1.19
SIPA1L3-201ENST00000222345 SETXQ7Z333 2677 aaKnown RBP7.64□□□□□ -1.19
SIPA1L3-201ENST00000222345 TRIOO75962 3097 aa7.63□□□□□ -1.19
SIPA1L3-201ENST00000222345 UBR5O95071 2799 aaPredicted RBP7.61□□□□□ -1.19
SIPA1L3-201ENST00000222345 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
SIPA1L3-201ENST00000222345 FRYQ5TBA9 3013 aa7.6□□□□□ -1.19
SIPA1L3-201ENST00000222345 LAMA3Q16787 3333 aa7.58□□□□□ -1.2
SIPA1L3-201ENST00000222345 FREM2Q5SZK8 3169 aa7.58□□□□□ -1.2
SIPA1L3-201ENST00000222345 DSPP15924 2871 aaKnown RBP7.57□□□□□ -1.2
SIPA1L3-201ENST00000222345 H0YAA0 97 aa7.57□□□□□ -1.2
SIPA1L3-201ENST00000222345 ZNF292O60281 2723 aa7.57□□□□□ -1.2
SIPA1L3-201ENST00000222345 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
SIPA1L3-201ENST00000222345 Q6ZRN7 208 aaPredicted RBP7.55□□□□□ -1.2
SIPA1L3-201ENST00000222345 DNAH14Q0VDD8 3507 aa7.55□□□□□ -1.2
SIPA1L3-201ENST00000222345 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
SIPA1L3-201ENST00000222345 WDFY4Q6ZS81 3184 aa7.54□□□□□ -1.2
SIPA1L3-201ENST00000222345 KALRNO60229 2985 aa7.53□□□□□ -1.2
SIPA1L3-201ENST00000222345 CDH23Q9H251 3354 aa7.53□□□□□ -1.2
SIPA1L3-201ENST00000222345 BRCA2P51587 3418 aa7.53□□□□□ -1.2
SIPA1L3-201ENST00000222345 RANBP2P49792 3224 aaKnown RBP7.52□□□□□ -1.21
SIPA1L3-201ENST00000222345 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
SIPA1L3-201ENST00000222345 LRBAP50851 2863 aa7.51□□□□□ -1.21
SIPA1L3-201ENST00000222345 TRANK1O15050 2925 aa7.5□□□□□ -1.21
SIPA1L3-201ENST00000222345 USP34Q70CQ2 3546 aa7.5□□□□□ -1.21
SIPA1L3-201ENST00000222345 IGSF10Q6WRI0 2623 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms