RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
EXTL3-201ENST00000220562 ROMO1P60602 79 aa10.54□□□□□ -0.72
EXTL3-201ENST00000220562 OXTP01178 125 aa10.54□□□□□ -0.72
EXTL3-201ENST00000220562 RPL37P61927 97 aaKnown RBP10.54□□□□□ -0.72
EXTL3-201ENST00000220562 PANO1I0J062 215 aa10.52□□□□□ -0.72
EXTL3-201ENST00000220562 LCE6AA0A183 80 aa10.52□□□□□ -0.72
EXTL3-201ENST00000220562 M0QZ58 72 aa10.52□□□□□ -0.73
EXTL3-201ENST00000220562 Q6ZR54 194 aa10.51□□□□□ -0.73
EXTL3-201ENST00000220562 KRTAP4-16G5E9R7 235 aaPredicted RBP10.49□□□□□ -0.73
EXTL3-201ENST00000220562 PRRC2CQ9Y520 2896 aaKnown RBP10.48□□□□□ -0.73
EXTL3-201ENST00000220562 EPG5Q9HCE0 2579 aa10.48□□□□□ -0.73
EXTL3-201ENST00000220562 FLNAP21333 2647 aaKnown RBP10.47□□□□□ -0.73
EXTL3-201ENST00000220562 H3BS24 57 aa10.46□□□□□ -0.73
EXTL3-201ENST00000220562 USP24Q9UPU5 2620 aa10.46□□□□□ -0.74
EXTL3-201ENST00000220562 ADM2Q7Z4H4 148 aa10.46□□□□□ -0.74
EXTL3-201ENST00000220562 SPATA8Q6RVD6 105 aa10.44□□□□□ -0.74
EXTL3-201ENST00000220562 MGAM2Q2M2H8 2515 aa10.44□□□□□ -0.74
EXTL3-201ENST00000220562 A0A0A0MQY5 61 aa10.43□□□□□ -0.74
EXTL3-201ENST00000220562 KRTAP29-1A8MX34 341 aaPredicted RBP10.41□□□□□ -0.74
EXTL3-201ENST00000220562 A0A087X002 238 aa10.41□□□□□ -0.74
EXTL3-201ENST00000220562 ITPR3Q14573 2671 aa10.4□□□□□ -0.75
EXTL3-201ENST00000220562 CEP350Q5VT06 3117 aa10.39□□□□□ -0.75
EXTL3-201ENST00000220562 CHD7Q9P2D1 2997 aa10.36□□□□□ -0.75
EXTL3-201ENST00000220562 NOTCH2NLQ7Z3S9 236 aa10.34□□□□□ -0.75
EXTL3-201ENST00000220562 PLAC4Q8WY50 150 aa10.33□□□□□ -0.76
EXTL3-201ENST00000220562 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
EXTL3-201ENST00000220562 ATRQ13535 2644 aa10.25□□□□□ -0.77
EXTL3-201ENST00000220562 FLNBO75369 2602 aaKnown RBP10.22□□□□□ -0.77
EXTL3-201ENST00000220562 ASB16-AS1Q495Z4 193 aa10.2□□□□□ -0.78
EXTL3-201ENST00000220562 KRTAP7-1Q8IUC3 87 aa10.15□□□□□ -0.78
EXTL3-201ENST00000220562 PCNTO95613 3336 aa10.15□□□□□ -0.78
EXTL3-201ENST00000220562 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
EXTL3-201ENST00000220562 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
EXTL3-201ENST00000220562 RPS29P62273 56 aaKnown RBP10.13□□□□□ -0.79
EXTL3-201ENST00000220562 A8MU10 97 aa10.13□□□□□ -0.79
EXTL3-201ENST00000220562 CHD9Q3L8U1 2897 aa10.12□□□□□ -0.79
EXTL3-201ENST00000220562 MAST4O15021 2626 aa10.11□□□□□ -0.79
EXTL3-201ENST00000220562 A8MUU9 505 aa10.07□□□□□ -0.8
EXTL3-201ENST00000220562 CFAP46Q8IYW2 2715 aa10.07□□□□□ -0.8
EXTL3-201ENST00000220562 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
EXTL3-201ENST00000220562 MKI67P46013 3256 aaKnown RBP10.04□□□□□ -0.8
EXTL3-201ENST00000220562 KRTAP25-1Q3LHN0 102 aa10.04□□□□□ -0.8
EXTL3-201ENST00000220562 HTTP42858 3142 aa10.03□□□□□ -0.8
EXTL3-201ENST00000220562 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
EXTL3-201ENST00000220562 A6NN06 94 aa10.02□□□□□ -0.8
EXTL3-201ENST00000220562 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
EXTL3-201ENST00000220562 MGAQ8IWI9 3026 aa9.94□□□□□ -0.82
EXTL3-201ENST00000220562 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
EXTL3-201ENST00000220562 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
EXTL3-201ENST00000220562 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
EXTL3-201ENST00000220562 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
EXTL3-201ENST00000220562 TRANK1O15050 2925 aa9.84□□□□□ -0.83
EXTL3-201ENST00000220562 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
EXTL3-201ENST00000220562 TEX15Q9BXT5 2789 aa9.83□□□□□ -0.84
EXTL3-201ENST00000220562 LAMA3Q16787 3333 aa9.82□□□□□ -0.84
EXTL3-201ENST00000220562 AKAP13Q12802 2813 aa9.8□□□□□ -0.84
EXTL3-201ENST00000220562 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
EXTL3-201ENST00000220562 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
EXTL3-201ENST00000220562 TRIOO75962 3097 aa9.78□□□□□ -0.84
EXTL3-201ENST00000220562 CENPEQ02224 2701 aa9.74□□□□□ -0.85
EXTL3-201ENST00000220562 STAB1Q9NY15 2570 aa9.72□□□□□ -0.85
EXTL3-201ENST00000220562 TNP1P09430 55 aa9.72□□□□□ -0.85
EXTL3-201ENST00000220562 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
EXTL3-201ENST00000220562 BRCA2P51587 3418 aa9.71□□□□□ -0.85
EXTL3-201ENST00000220562 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
EXTL3-201ENST00000220562 UNC79Q9P2D8 2635 aa9.7□□□□□ -0.86
EXTL3-201ENST00000220562 LAMA2P24043 3122 aaKnown RBP9.69□□□□□ -0.86
EXTL3-201ENST00000220562 FLG2Q5D862 2391 aaPredicted RBP9.68□□□□□ -0.86
EXTL3-201ENST00000220562 WDFY4Q6ZS81 3184 aa9.67□□□□□ -0.86
EXTL3-201ENST00000220562 C10orf95Q9H7T3 257 aa9.65□□□□□ -0.86
EXTL3-201ENST00000220562 NBEAL2Q6ZNJ1 2754 aa9.65□□□□□ -0.86
EXTL3-201ENST00000220562 ZNF292O60281 2723 aa9.63□□□□□ -0.87
EXTL3-201ENST00000220562 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
EXTL3-201ENST00000220562 TEP1Q99973 2627 aaKnown RBP9.62□□□□□ -0.87
EXTL3-201ENST00000220562 XIRP2A4UGR9 3374 aa9.61□□□□□ -0.87
EXTL3-201ENST00000220562 SETXQ7Z333 2677 aaKnown RBP9.57□□□□□ -0.88
EXTL3-201ENST00000220562 CDH23Q9H251 3354 aa9.56□□□□□ -0.88
EXTL3-201ENST00000220562 PRUNE2Q8WUY3 3088 aa9.55□□□□□ -0.88
EXTL3-201ENST00000220562 CELSR3Q9NYQ7 3312 aa9.55□□□□□ -0.88
EXTL3-201ENST00000220562 FRYQ5TBA9 3013 aa9.55□□□□□ -0.88
EXTL3-201ENST00000220562 COL6A5A8TX70 2615 aa9.54□□□□□ -0.88
EXTL3-201ENST00000220562 XP32Q5T750 250 aa9.53□□□□□ -0.88
EXTL3-201ENST00000220562 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
EXTL3-201ENST00000220562 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
EXTL3-201ENST00000220562 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
EXTL3-201ENST00000220562 KRTAP21-3Q3LHN1 58 aa9.48□□□□□ -0.89
EXTL3-201ENST00000220562 DNAH14Q0VDD8 3507 aa9.46□□□□□ -0.9
EXTL3-201ENST00000220562 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
EXTL3-201ENST00000220562 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
EXTL3-201ENST00000220562 NOTCH1P46531 2555 aa9.45□□□□□ -0.9
EXTL3-201ENST00000220562 ITPR2Q14571 2701 aa9.44□□□□□ -0.9
EXTL3-201ENST00000220562 VPS13AQ96RL7 3174 aa9.43□□□□□ -0.9
EXTL3-201ENST00000220562 H0YAA0 97 aa9.39□□□□□ -0.91
EXTL3-201ENST00000220562 PP632Q6XCG6 107 aa9.39□□□□□ -0.91
EXTL3-201ENST00000220562 FREM2Q5SZK8 3169 aa9.38□□□□□ -0.91
EXTL3-201ENST00000220562 KMT2BQ9UMN6 2715 aaPredicted RBP9.37□□□□□ -0.91
EXTL3-201ENST00000220562 KALRNO60229 2985 aa9.37□□□□□ -0.91
EXTL3-201ENST00000220562 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
EXTL3-201ENST00000220562 COL6A3P12111 3177 aa9.34□□□□□ -0.91
EXTL3-201ENST00000220562 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms