RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 A0A0G2JQZ4 141 aa6.94□□□□□ -1.3
SYPL1-201ENST00000011473 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
SYPL1-201ENST00000011473 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
SYPL1-201ENST00000011473 RETNLBQ9BQ08 111 aa6.94□□□□□ -1.3
SYPL1-201ENST00000011473 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
SYPL1-201ENST00000011473 HRCT1Q6UXD1 115 aa6.92□□□□□ -1.3
SYPL1-201ENST00000011473 LPAP08519 4548 aa6.92□□□□□ -1.3
SYPL1-201ENST00000011473 COX6CP09669 75 aa6.92□□□□□ -1.3
SYPL1-201ENST00000011473 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
SYPL1-201ENST00000011473 SNCGO76070 127 aa6.91□□□□□ -1.3
SYPL1-201ENST00000011473 PRR4Q16378 134 aa6.9□□□□□ -1.3
SYPL1-201ENST00000011473 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.3
SYPL1-201ENST00000011473 LRP2P98164 4655 aa6.9□□□□□ -1.31
SYPL1-201ENST00000011473 A0A1B0GX51 115 aa6.89□□□□□ -1.31
SYPL1-201ENST00000011473 SPINK1P00995 79 aa6.89□□□□□ -1.31
SYPL1-201ENST00000011473 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
SYPL1-201ENST00000011473 F8WEM9 126 aa6.88□□□□□ -1.31
SYPL1-201ENST00000011473 DNAL4O96015 105 aa6.88□□□□□ -1.31
SYPL1-201ENST00000011473 H3BUT2 72 aa6.87□□□□□ -1.31
SYPL1-201ENST00000011473 FABP2P12104 132 aa6.87□□□□□ -1.31
SYPL1-201ENST00000011473 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
SYPL1-201ENST00000011473 A0A1B0GV72 72 aa6.86□□□□□ -1.31
SYPL1-201ENST00000011473 LST1O00453 97 aa6.86□□□□□ -1.31
SYPL1-201ENST00000011473 OCIAD2Q56VL3 154 aa6.86□□□□□ -1.31
SYPL1-201ENST00000011473 PPDPFLQ8WWR9 84 aa6.86□□□□□ -1.31
SYPL1-201ENST00000011473 ORMDL1Q9P0S3 153 aa6.85□□□□□ -1.31
SYPL1-201ENST00000011473 UBR4Q5T4S7 5183 aa6.84□□□□□ -1.31
SYPL1-201ENST00000011473 TCL1BO95988 128 aa6.84□□□□□ -1.31
SYPL1-201ENST00000011473 NDUFV3P56181 108 aaKnown RBP6.84□□□□□ -1.31
SYPL1-201ENST00000011473 IGFL1Q6UW32 110 aa6.84□□□□□ -1.31
SYPL1-201ENST00000011473 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
SYPL1-201ENST00000011473 TRACP01848 142 aa6.83□□□□□ -1.32
SYPL1-201ENST00000011473 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
SYPL1-201ENST00000011473 H3BMG7 143 aa6.82□□□□□ -1.32
SYPL1-201ENST00000011473 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
SYPL1-201ENST00000011473 C9orf118A6NHY6 69 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 ATXN8Q156A1 80 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 GHRHP01286 108 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 CD164Q04900 197 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 Q6JHZ5 121 aa6.8□□□□□ -1.32
SYPL1-201ENST00000011473 IGLV7-46A0A075B6I9 117 aa6.79□□□□□ -1.32
SYPL1-201ENST00000011473 LIMD2Q9BT23 127 aa6.78□□□□□ -1.32
SYPL1-201ENST00000011473 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
SYPL1-201ENST00000011473 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SYPL1-201ENST00000011473 LYRM7Q5U5X0 104 aa6.77□□□□□ -1.33
SYPL1-201ENST00000011473 COL5A1-AS1Q5SY13 56 aa6.76□□□□□ -1.33
SYPL1-201ENST00000011473 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
SYPL1-201ENST00000011473 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
SYPL1-201ENST00000011473 UBE2V1Q13404 147 aa6.75□□□□□ -1.33
SYPL1-201ENST00000011473 MTURNQ8N3F0 131 aa6.75□□□□□ -1.33
SYPL1-201ENST00000011473 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
SYPL1-201ENST00000011473 H3BQ85 93 aa6.74□□□□□ -1.33
SYPL1-201ENST00000011473 C9JAW5 83 aa6.74□□□□□ -1.33
SYPL1-201ENST00000011473 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
SYPL1-201ENST00000011473 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
SYPL1-201ENST00000011473 Q5XG85 94 aa6.73□□□□□ -1.33
SYPL1-201ENST00000011473 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
SYPL1-201ENST00000011473 TPRXLQ17RH7 258 aa6.71□□□□□ -1.33
SYPL1-201ENST00000011473 TEN1Q86WV5 123 aa6.71□□□□□ -1.33
SYPL1-201ENST00000011473 A0A087WSZ3 146 aa6.71□□□□□ -1.34
SYPL1-201ENST00000011473 SPCS1Q9Y6A9 102 aa6.71□□□□□ -1.34
SYPL1-201ENST00000011473 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
SYPL1-201ENST00000011473 RBM3P98179 157 aaKnown RBP6.7□□□□□ -1.34
SYPL1-201ENST00000011473 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
SYPL1-201ENST00000011473 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
SYPL1-201ENST00000011473 CCKP06307 115 aa6.69□□□□□ -1.34
SYPL1-201ENST00000011473 Q6Q795 121 aa6.69□□□□□ -1.34
SYPL1-201ENST00000011473 VPS25Q9BRG1 176 aa6.69□□□□□ -1.34
SYPL1-201ENST00000011473 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
SYPL1-201ENST00000011473 DSCR8Q96T75 97 aa6.68□□□□□ -1.34
SYPL1-201ENST00000011473 MUC2Q02817 5179 aa6.66□□□□□ -1.34
SYPL1-201ENST00000011473 C9orf92A6NGG3 77 aa6.66□□□□□ -1.34
SYPL1-201ENST00000011473 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
SYPL1-201ENST00000011473 C14orf132Q9NPU4 83 aa6.65□□□□□ -1.35
SYPL1-201ENST00000011473 JMJD7-PLA2G4BH0Y9G9 81 aa6.64□□□□□ -1.35
SYPL1-201ENST00000011473 H3BT86 120 aa6.64□□□□□ -1.35
SYPL1-201ENST00000011473 SS18L2Q9UHA2 77 aa6.64□□□□□ -1.35
SYPL1-201ENST00000011473 K7EP34 96 aa6.63□□□□□ -1.35
SYPL1-201ENST00000011473 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
SYPL1-201ENST00000011473 Q6ZQT0 140 aa6.62□□□□□ -1.35
SYPL1-201ENST00000011473 Q96NJ1 140 aa6.62□□□□□ -1.35
SYPL1-201ENST00000011473 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
SYPL1-201ENST00000011473 DEFB116Q30KQ4 102 aa6.61□□□□□ -1.35
SYPL1-201ENST00000011473 XP32Q5T750 250 aa6.61□□□□□ -1.35
SYPL1-201ENST00000011473 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
SYPL1-201ENST00000011473 PRO0461Q9UI25 63 aa6.59□□□□□ -1.35
SYPL1-201ENST00000011473 GTF2H5Q6ZYL4 71 aa6.57□□□□□ -1.36
SYPL1-201ENST00000011473 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
SYPL1-201ENST00000011473 LINC00472Q9H8W2 130 aa6.56□□□□□ -1.36
SYPL1-201ENST00000011473 IGKV4-1P06312 121 aa6.55□□□□□ -1.36
SYPL1-201ENST00000011473 PDE6GP18545 87 aa6.55□□□□□ -1.36
SYPL1-201ENST00000011473 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
SYPL1-201ENST00000011473 DSCR10P59022 87 aa6.5□□□□□ -1.37
SYPL1-201ENST00000011473 F8W1H4 67 aa6.5□□□□□ -1.37
SYPL1-201ENST00000011473 SEC61BP60468 96 aaKnown RBP6.49□□□□□ -1.37
SYPL1-201ENST00000011473 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
SYPL1-201ENST00000011473 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
SYPL1-201ENST00000011473 A0A1B0GW54 56 aa6.48□□□□□ -1.37
SYPL1-201ENST00000011473 IGHV6-1A0A0B4J1U7 121 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms