RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Gm45213A0A0U1RNZ6 101 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Rpl32P62911 135 aaKnown RBP11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Tmem86bQ497J1 226 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Lsm4Q9QXA5 137 aaKnown RBP11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Igkv4-80A0A075B5L7 116 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 OtorQ9JIE3 128 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Plxna2P70207 1894 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Tcl1b2P56841 117 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Pth2Q91W27 100 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Pkd1l3Q2EG98 2201 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Usmg5Q78IK2 58 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 LenepQ9WVB6 61 aa11.42□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Adamts9E9PUN6 1931 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Igkv1-99F6XWB2 120 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Fxyd7P59648 80 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Fbxl7Q5BJ29 491 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Vwa8Q8CC88 1905 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 PerpQ9JK95 193 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 1500009C09RikD3YYW9 81 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Tcrg-C3L7N479 172 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 P03985 172 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 IappP12968 93 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Trav2Q5R1I9 109 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Gkn1Q9CR36 201 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Slc25a39Q9D8K8 359 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Jpt2Q6PGH2 190 aaKnown RBP11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Igkv4-68A0A0B4J1I7 117 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Cmc4Q61908 68 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Olfr745Q7TRL9 328 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Gm4763Q8CFJ5 196 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 PtprdQ64487 1912 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 RlfA2A7F4 1918 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 P01724 129 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 P01727 129 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 CckP09240 115 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Ube2v1Q9CZY3 147 aa11.41□□□□□ -0.58
Col1a1-201ENSMUST00000001547 BC035044E0CXF8 138 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Bcl6bO88282 474 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Foxh1O88621 401 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Gm37388A0A0A6YY46 143 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Gm10521E9PZK0 135 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Igkv5-37A0A140T8N4 115 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Prdm6Q3UZD5 596 aa11.4□□□□□ -0.58
Col1a1-201ENSMUST00000001547 Gm15093A2BI72 449 aa11.4□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Gm15097E9QA14 449 aa11.4□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Nr2c2apQ3TV70 140 aa11.4□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Prok2Q9QXU7 128 aa11.4□□□□□ -0.59
Col1a1-201ENSMUST00000001547 3110018I06RikQ9CXS0 120 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ear14F6YUX7 155 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 P01649 108 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Rpl36aP83882 106 aaKnown RBP11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Nit2Q9JHW2 276 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ighv1-18A0A0A6YXN4 117 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Gpx1P11352 201 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 OtosQ8R448 89 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Igkv8-24A0A140T8P5 121 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Xcl1P47993 114 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Cox6b1P56391 86 aaKnown RBP11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 SpinklQ8CEK3 90 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ighv3-8A0A075B5T0 131 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 C1qtnf5Q8K479 243 aa11.39□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ca5aP23589 299 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Tdgf1P51865 171 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 BC049762Q8C601 163 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Mrpl32Q9DCI9 187 aaKnown RBP11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Trav6-4A0A075B6B4 115 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Igkv4-81A0A0G2JEY5 119 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Igkv12-89A0A0G2JGW8 112 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Igkv6-15A0A140T8M5 115 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 MdfiP70331 251 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ttc9cQ810A3 171 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Cacna1eQ61290 2272 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Saa4P31532 130 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Cdkn2aQ64364 169 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Hist2h2beQ64524 126 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Lmo1Q924W9 156 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ovol1Q9WTJ2 267 aa11.38□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Klrd1O54707 179 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ankrd39Q9D2X0 183 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Ros1Q78DX7 2340 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Trav9-1A0A075B601 112 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 1700001C19RikQ8K168 210 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Cxcl14Q9WUQ5 99 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Gm9747Q810H1 104 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Gdf15Q9Z0J7 303 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Trav14d-3-dv8A0A075B619 120 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Gm16381A0A1Y7VKT9 73 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 P01788 123 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Tmem256Q5F285 113 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Lgals4Q8K419 326 aa11.37□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Phf3B2RQG2 2025 aaKnown RBP11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Hbb-bsA8DUK4 147 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Hbb-b1P02088 147 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Jsrp1Q3MI48 332 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Il19Q8CJ70 176 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Fxyd1Q9Z239 92 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Tcrg-C1A0A075B5Z0 172 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Igfbpl1Q80W15 270 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 Pygo1Q9D0P5 417 aa11.36□□□□□ -0.59
Col1a1-201ENSMUST00000001547 H2-DMb1P35737 261 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 59.4 ms