RNA–Protein interactions for RNA: ENST00000639041.1

CCDC7-212, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC7, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-212ENST00000639041 LAMA3Q16787 3333 aa-1.16□□□□□ -2.6
CCDC7-212ENST00000639041 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.17□□□□□ -2.6
CCDC7-212ENST00000639041 DNAH2Q9P225 4427 aa-1.17□□□□□ -2.6
CCDC7-212ENST00000639041 SPTY2D1-AS1A0A0U1RR47 76 aa-1.17□□□□□ -2.6
CCDC7-212ENST00000639041 DEFA5Q01523 94 aa-1.17□□□□□ -2.6
CCDC7-212ENST00000639041 ANKRD11Q6UB99 2663 aaPredicted RBP-1.17□□□□□ -2.6
CCDC7-212ENST00000639041 DMXL1Q9Y485 3027 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 F8WEM9 126 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 LEPROTL1O95214 131 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 ZNF720Q7Z2F6 126 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 WFDC13Q8IUB5 93 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 CDKN2A-AS1Q9UH64 79 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 MGAM2Q2M2H8 2515 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 SAMD9Q5K651 1589 aa-1.18□□□□□ -2.6
CCDC7-212ENST00000639041 RYR2Q92736 4967 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 C9orf92A6NGG3 77 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 D6R8Y8 96 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 CCL22O00626 93 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 ACACAQ13085 2346 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 LELP1Q5T871 98 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 MUSTN1Q8IVN3 82 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 LYSTQ99698 3801 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 VPS13BQ7Z7G8 4022 aa-1.19□□□□□ -2.6
CCDC7-212ENST00000639041 REV3LO60673 3130 aa-1.2□□□□□ -2.6
CCDC7-212ENST00000639041 CICQ96RK0 1608 aaPredicted RBP-1.2□□□□□ -2.6
CCDC7-212ENST00000639041 NIPBLQ6KC79 2804 aaeCLIP-1.2□□□□□ -2.6
CCDC7-212ENST00000639041 ZZEF1O43149 2961 aa-1.2□□□□□ -2.6
CCDC7-212ENST00000639041 PLECQ15149 4684 aaKnown RBP-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 RNF213Q63HN8 5207 aa-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 MT1HP80294 61 aa-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 HIGD1BQ9P298 99 aa-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 TRANK1O15050 2925 aa-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 COL14A1Q05707 1796 aaKnown RBP-1.21□□□□□ -2.6
CCDC7-212ENST00000639041 ANKRD50Q9ULJ7 1429 aa-1.22□□□□□ -2.6
CCDC7-212ENST00000639041 DNAH11Q96DT5 4516 aa-1.22□□□□□ -2.6
CCDC7-212ENST00000639041 IGLC2P0DOY2 106 aa-1.22□□□□□ -2.6
CCDC7-212ENST00000639041 IGLC3P0DOY3 106 aa-1.22□□□□□ -2.6
CCDC7-212ENST00000639041 HMGN3Q15651 99 aa-1.22□□□□□ -2.6
CCDC7-212ENST00000639041 ANK3Q12955 4377 aaKnown RBP-1.23□□□□□ -2.61
CCDC7-212ENST00000639041 APOBP04114 4563 aaKnown RBP-1.23□□□□□ -2.61
CCDC7-212ENST00000639041 KALRNO60229 2985 aa-1.23□□□□□ -2.61
CCDC7-212ENST00000639041 CLIP1P30622 1438 aa-1.23□□□□□ -2.61
CCDC7-212ENST00000639041 MTORP42345 2549 aa-1.24□□□□□ -2.61
CCDC7-212ENST00000639041 M0R143 59 aa-1.24□□□□□ -2.61
CCDC7-212ENST00000639041 TEX15Q9BXT5 2789 aa-1.24□□□□□ -2.61
CCDC7-212ENST00000639041 CLTCQ00610 1675 aaKnown RBP-1.24□□□□□ -2.61
CCDC7-212ENST00000639041 WDR87Q6ZQQ6 2873 aa-1.25□□□□□ -2.61
CCDC7-212ENST00000639041 USP9XQ93008 2570 aaPredicted RBP-1.25□□□□□ -2.61
CCDC7-212ENST00000639041 UTP20O75691 2785 aaKnown RBP-1.26□□□□□ -2.61
CCDC7-212ENST00000639041 PDE4DIPQ5VU43 2346 aa-1.26□□□□□ -2.61
CCDC7-212ENST00000639041 PKD1L2Q7Z442 2459 aa-1.27□□□□□ -2.61
CCDC7-212ENST00000639041 GCN1Q92616 2671 aaKnown RBP-1.27□□□□□ -2.61
CCDC7-212ENST00000639041 NBEAQ8NFP9 2946 aa-1.27□□□□□ -2.61
CCDC7-212ENST00000639041 KIF20BQ96Q89 1820 aa-1.28□□□□□ -2.61
CCDC7-212ENST00000639041 K7EP34 96 aa-1.28□□□□□ -2.61
CCDC7-212ENST00000639041 ALKAL2Q6UX46 152 aa-1.28□□□□□ -2.61
CCDC7-212ENST00000639041 TRIOO75962 3097 aa-1.28□□□□□ -2.61
CCDC7-212ENST00000639041 CRYBG1Q9Y4K1 1723 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 RELNP78509 3460 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 DNHD1Q96M86 4753 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 NMSQ5H8A3 153 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 S4R3F8 94 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 LRRK2Q5S007 2527 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 CCDC168Q8NDH2 2452 aa-1.29□□□□□ -2.62
CCDC7-212ENST00000639041 A0A0C4DFX4 3053 aa-1.3□□□□□ -2.62
CCDC7-212ENST00000639041 H0YAA0 97 aa-1.3□□□□□ -2.62
CCDC7-212ENST00000639041 DEFB1P60022 68 aa-1.3□□□□□ -2.62
CCDC7-212ENST00000639041 DNAH1Q9P2D7 4330 aa-1.3□□□□□ -2.62
CCDC7-212ENST00000639041 RIF1Q5UIP0 2472 aaKnown RBP-1.31□□□□□ -2.62
CCDC7-212ENST00000639041 FAM186AA6NE01 2351 aa-1.31□□□□□ -2.62
CCDC7-212ENST00000639041 SACSQ9NZJ4 4579 aa-1.32□□□□□ -2.62
CCDC7-212ENST00000639041 DEFB110Q30KQ9 67 aa-1.32□□□□□ -2.62
CCDC7-212ENST00000639041 MAP3K1Q13233 1512 aa-1.32□□□□□ -2.62
CCDC7-212ENST00000639041 CMYA5Q8N3K9 4069 aa-1.33□□□□□ -2.62
CCDC7-212ENST00000639041 COX6B2Q6YFQ2 88 aa-1.33□□□□□ -2.62
CCDC7-212ENST00000639041 DSPP15924 2871 aaKnown RBP-1.33□□□□□ -2.62
CCDC7-212ENST00000639041 ABCC10Q5T3U5 1492 aa-1.33□□□□□ -2.62
CCDC7-212ENST00000639041 NBEAL2Q6ZNJ1 2754 aa-1.33□□□□□ -2.62
CCDC7-212ENST00000639041 ACACBO00763 2458 aa-1.34□□□□□ -2.62
CCDC7-212ENST00000639041 NDUFA3O95167 84 aa-1.34□□□□□ -2.62
CCDC7-212ENST00000639041 KRTAP19-5Q3LI72 72 aa-1.35□□□□□ -2.63
CCDC7-212ENST00000639041 BCORQ6W2J9 1755 aa-1.35□□□□□ -2.63
CCDC7-212ENST00000639041 MT1XP80297 61 aa-1.36□□□□□ -2.63
CCDC7-212ENST00000639041 UBE2D4Q9Y2X8 147 aa-1.36□□□□□ -2.63
CCDC7-212ENST00000639041 CEP290O15078 2479 aa-1.37□□□□□ -2.63
CCDC7-212ENST00000639041 COL12A1Q99715 3063 aa-1.37□□□□□ -2.63
CCDC7-212ENST00000639041 PRLHP81277 87 aa-1.37□□□□□ -2.63
CCDC7-212ENST00000639041 EPRSP07814 1512 aaKnown RBP-1.37□□□□□ -2.63
CCDC7-212ENST00000639041 ALKQ9UM73 1620 aa-1.37□□□□□ -2.63
CCDC7-212ENST00000639041 DYNC1H1Q14204 4646 aaKnown RBP-1.38□□□□□ -2.63
CCDC7-212ENST00000639041 PKD1L3Q7Z443 1732 aa-1.38□□□□□ -2.63
CCDC7-212ENST00000639041 FRYQ5TBA9 3013 aa-1.38□□□□□ -2.63
CCDC7-212ENST00000639041 RANBP2P49792 3224 aaKnown RBP-1.38□□□□□ -2.63
CCDC7-212ENST00000639041 MYH4Q9Y623 1939 aa-1.38□□□□□ -2.63
CCDC7-212ENST00000639041 CELSR3Q9NYQ7 3312 aa-1.39□□□□□ -2.63
CCDC7-212ENST00000639041 ANKRD26Q9UPS8 1709 aa-1.4□□□□□ -2.63
CCDC7-212ENST00000639041 COX7BP24311 80 aa-1.4□□□□□ -2.63
CCDC7-212ENST00000639041 RPL38P63173 70 aaKnown RBP-1.4□□□□□ -2.63
CCDC7-212ENST00000639041 SNHG12Q9BXW3 62 aa-1.4□□□□□ -2.63
CCDC7-212ENST00000639041 FANCAO15360 1455 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms