RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 PDE6GP18545 87 aa5.45□□□□□ -1.54
SND1-IT1-201ENST00000623342 UBL5Q9BZL1 73 aa5.45□□□□□ -1.54
SND1-IT1-201ENST00000623342 ATOX1O00244 68 aa5.44□□□□□ -1.54
SND1-IT1-201ENST00000623342 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
SND1-IT1-201ENST00000623342 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
SND1-IT1-201ENST00000623342 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 RMI2Q96E14 147 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 SS18L2Q9UHA2 77 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 STARD9Q9P2P6 4700 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 C3orf22Q8N5N4 141 aa5.43□□□□□ -1.54
SND1-IT1-201ENST00000623342 A0A087WVE0 104 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 UQCRQO14949 82 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 KCNQ1DNQ9H478 68 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 UPK3BQ9BT76 320 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
SND1-IT1-201ENST00000623342 M0R2N4 97 aa5.41□□□□□ -1.54
SND1-IT1-201ENST00000623342 CASC10Q5T4H9 136 aa5.41□□□□□ -1.54
SND1-IT1-201ENST00000623342 C7orf33Q8WU49 177 aa5.41□□□□□ -1.54
SND1-IT1-201ENST00000623342 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
SND1-IT1-201ENST00000623342 COX7CP15954 63 aa5.41□□□□□ -1.54
SND1-IT1-201ENST00000623342 C9orf153Q5TBE3 101 aa5.4□□□□□ -1.54
SND1-IT1-201ENST00000623342 DYNC2H1Q8NCM8 4307 aaKnown RBP5.4□□□□□ -1.55
SND1-IT1-201ENST00000623342 IGLV5-37A0A075B6J1 123 aa5.39□□□□□ -1.55
SND1-IT1-201ENST00000623342 Q6ZVQ6 151 aa5.39□□□□□ -1.55
SND1-IT1-201ENST00000623342 FAM19A1Q7Z5A9 133 aa5.39□□□□□ -1.55
SND1-IT1-201ENST00000623342 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
SND1-IT1-201ENST00000623342 PRYO14603 147 aa5.38□□□□□ -1.55
SND1-IT1-201ENST00000623342 SERP2Q8N6R1 65 aa5.38□□□□□ -1.55
SND1-IT1-201ENST00000623342 IGLV1-50A0A075B6I6 118 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 LINC01547P58512 204 aaPredicted RBP5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 HAMPP81172 84 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 KMT2AQ03164 3969 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 LOC107984640A0A0U1RRK4 108 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
SND1-IT1-201ENST00000623342 CRYGAP11844 174 aa5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 Q6ZRX8 168 aa5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 KRTAP4-16G5E9R7 235 aaPredicted RBP5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 SPRR1AP35321 89 aa5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 CXCL6P80162 114 aa5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
SND1-IT1-201ENST00000623342 ETDCA0A1B0GVM5 59 aa5.35□□□□□ -1.55
SND1-IT1-201ENST00000623342 DEFB105AQ8NG35 78 aa5.35□□□□□ -1.55
SND1-IT1-201ENST00000623342 DNAH2Q9P225 4427 aa5.35□□□□□ -1.55
SND1-IT1-201ENST00000623342 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
SND1-IT1-201ENST00000623342 Q8N377 158 aa5.35□□□□□ -1.55
SND1-IT1-201ENST00000623342 FBN3Q75N90 2809 aa5.34□□□□□ -1.55
SND1-IT1-201ENST00000623342 FAM19A5Q7Z5A7 132 aaPredicted RBP5.34□□□□□ -1.55
SND1-IT1-201ENST00000623342 Q9BRP9 147 aa5.34□□□□□ -1.55
SND1-IT1-201ENST00000623342 KRTAP1-5Q9BYS1 174 aa5.33□□□□□ -1.56
SND1-IT1-201ENST00000623342 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
SND1-IT1-201ENST00000623342 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
SND1-IT1-201ENST00000623342 UBE2DNLQ8IWF7 75 aa5.33□□□□□ -1.56
SND1-IT1-201ENST00000623342 BCE1O60756 84 aa5.32□□□□□ -1.56
SND1-IT1-201ENST00000623342 APLNQ9ULZ1 77 aa5.32□□□□□ -1.56
SND1-IT1-201ENST00000623342 PSCAO43653 123 aa5.32□□□□□ -1.56
SND1-IT1-201ENST00000623342 CNBPP62633 177 aaKnown RBP5.31□□□□□ -1.56
SND1-IT1-201ENST00000623342 REG3GQ6UW15 175 aa5.31□□□□□ -1.56
SND1-IT1-201ENST00000623342 C16orf90A8MZG2 172 aa5.31□□□□□ -1.56
SND1-IT1-201ENST00000623342 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
SND1-IT1-201ENST00000623342 UBE2BP63146 152 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 ST20-AS1Q8NBB2 130 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 A0A096LNI7 61 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 NREPQ16612 68 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 B9D2Q9BPU9 175 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
SND1-IT1-201ENST00000623342 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 TNP2Q05952 138 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 TRAV7A0A075B6U4 112 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 IGKV2-24A0A0C4DH68 120 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 A0A1B0GW54 56 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 C3orf84H3BNL1 204 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 C14orf177Q52M58 125 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 SRRM2Q9UQ35 2752 aaKnown RBP5.29□□□□□ -1.56
SND1-IT1-201ENST00000623342 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
SND1-IT1-201ENST00000623342 A0A1W2PNN7 141 aa5.28□□□□□ -1.56
SND1-IT1-201ENST00000623342 C1orf137Q5JT78 98 aa5.28□□□□□ -1.56
SND1-IT1-201ENST00000623342 TMEM258P61165 79 aa5.27□□□□□ -1.57
SND1-IT1-201ENST00000623342 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.26□□□□□ -1.57
SND1-IT1-201ENST00000623342 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
SND1-IT1-201ENST00000623342 C4orf48Q5BLP8 95 aa5.26□□□□□ -1.57
SND1-IT1-201ENST00000623342 BPY2O14599 106 aa5.26□□□□□ -1.57
SND1-IT1-201ENST00000623342 Q8NBF4 154 aa5.26□□□□□ -1.57
SND1-IT1-201ENST00000623342 C20orf197Q8N268 126 aa5.25□□□□□ -1.57
SND1-IT1-201ENST00000623342 HYDINQ4G0P3 5121 aa5.25□□□□□ -1.57
SND1-IT1-201ENST00000623342 IGKV4-1P06312 121 aa5.25□□□□□ -1.57
SND1-IT1-201ENST00000623342 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
SND1-IT1-201ENST00000623342 NUPR2A6NF83 97 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 Q8N9L7 120 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 NBDYA0A0U1RRE5 68 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 PRLHP81277 87 aa5.24□□□□□ -1.57
SND1-IT1-201ENST00000623342 F8WEM9 126 aa5.23□□□□□ -1.57
SND1-IT1-201ENST00000623342 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
SND1-IT1-201ENST00000623342 LRCOL1A6NCL2 159 aa5.23□□□□□ -1.57
SND1-IT1-201ENST00000623342 CHTF8P0CG12 524 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms