RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 PRUNE2Q8WUY3 3088 aa2.61□□□□□ -1.99
HMGB1P50-201ENST00000605814 TACC2O95359 2948 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 IGKV2D-24A0A075B6R9 120 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 A6NED7 52 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 REG3AQ06141 175 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 NKAPP1Q8N9T2 125 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 WFDC10AQ9H1F0 79 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 C6orf48Q9UBA6 75 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 ACACAQ13085 2346 aa2.6□□□□□ -1.99
HMGB1P50-201ENST00000605814 CREBBPQ92793 2442 aa2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 IGLV8-61A0A075B6I0 122 aa2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 KRTAP4-16G5E9R7 235 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPRR1AP35321 89 aa2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 C1orf137Q5JT78 98 aa2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
HMGB1P50-201ENST00000605814 C2CD3Q4AC94 2353 aa2.59□□□□□ -2
HMGB1P50-201ENST00000605814 IGLV5-37A0A075B6J1 123 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 RPL37AP8A6NKH3 93 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 K7EQZ3 153 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 LELP1Q5T871 98 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 COA5Q86WW8 74 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 DMXL2Q8TDJ6 3036 aa2.58□□□□□ -2
HMGB1P50-201ENST00000605814 AKAP13Q12802 2813 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 H0Y9P7 68 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 ANGP03950 147 aaKnown RBP2.57□□□□□ -2
HMGB1P50-201ENST00000605814 TLX1NBP0CAT3 122 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 LINC01554Q52M75 96 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 Q8NAQ8 132 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 CELSR3Q9NYQ7 3312 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 WDFY4Q6ZS81 3184 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 SPTA1P02549 2419 aa2.57□□□□□ -2
HMGB1P50-201ENST00000605814 CSPG4Q6UVK1 2322 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 PRR4Q16378 134 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP26-1Q6PEX3 210 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 Q6ZRX8 168 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 OTOGLQ3ZCN5 2332 aa2.56□□□□□ -2
HMGB1P50-201ENST00000605814 DEFB131BA0A096LNP1 70 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 IGLV1-51P01701 117 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 LINC00313P59037 77 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 CASC2Q6XLA1 102 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 C7orf33Q8WU49 177 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 XAGE1AQ9HD64 81 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 NOTCH3Q9UM47 2321 aa2.55□□□□□ -2
HMGB1P50-201ENST00000605814 IGLV1-50A0A075B6I6 118 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 RTL8CO15255 209 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP5-9P26371 169 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 DEFB136Q30KP8 78 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 KRTAP24-1Q3LI83 254 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 CLPSL2Q6UWE3 100 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 Q6ZR54 194 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 CAMK2N2Q96S95 79 aa2.54□□□□□ -2
HMGB1P50-201ENST00000605814 DCHS2Q6V1P9 2916 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 IGLV10-54A0A075B6I4 117 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 A8MWP4 228 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 H3BNG1 76 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 DEFB130BP0DP73 79 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 DEFB130AP0DP74 79 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 SPINK7P58062 85 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 DEFB105AQ8NG35 78 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 LINC00472Q9H8W2 130 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 DMDP11532 3685 aa2.53□□□□□ -2
HMGB1P50-201ENST00000605814 HRNRQ86YZ3 2850 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 PRB1P04280 392 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 SPRR1BP22528 89 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 CCL19Q99731 98 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 SMG1Q96Q15 3661 aaKnown RBP2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 SPG11Q96JI7 2443 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
HMGB1P50-201ENST00000605814 DCHS1Q96JQ0 3298 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 HRES1P13985 223 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 IGFL1Q6UW32 110 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 C15orf56Q8N910 161 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 RETNLBQ9BQ08 111 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 HIVEP3Q5T1R4 2406 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 CSMD1Q96PZ7 3565 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 LRBAP50851 2863 aa2.51□□□□□ -2.01
HMGB1P50-201ENST00000605814 A0A096LPF7 62 aa2.5□□□□□ -2.01
HMGB1P50-201ENST00000605814 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
HMGB1P50-201ENST00000605814 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 ANKRD11Q6UB99 2663 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 H0Y9J4 135 aa2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 SERTAD4-AS1Q5TG53 156 aa2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 WFDC10BQ8IUB3 73 aa2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 SPENQ96T58 3664 aaKnown RBP2.49□□□□□ -2.01
HMGB1P50-201ENST00000605814 LOC400499M0QZD8 3231 aa2.48□□□□□ -2.01
HMGB1P50-201ENST00000605814 NBASA2RRP1 2371 aa2.48□□□□□ -2.01
HMGB1P50-201ENST00000605814 A0A087WSZ3 146 aa2.48□□□□□ -2.01
HMGB1P50-201ENST00000605814 IGKV2-24A0A0C4DH68 120 aa2.48□□□□□ -2.01
HMGB1P50-201ENST00000605814 SPART-AS1P0CW21 52 aa2.48□□□□□ -2.01
HMGB1P50-201ENST00000605814 ACYP2P14621 99 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms