RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 DOPEY2Q9Y3R5 2298 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 A0A1W2PPR1 153 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 RPL37AP61513 92 aaKnown RBP3.64□□□□□ -1.83
SMAD4-203ENST00000585448 BRD3OSQ6XYD6 125 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 CSNK1G2-AS1Q8NCQ2 148 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 PCNTO95613 3336 aa3.64□□□□□ -1.83
SMAD4-203ENST00000585448 KRTAP4-16G5E9R7 235 aaPredicted RBP3.63□□□□□ -1.83
SMAD4-203ENST00000585448 CASC10Q5T4H9 136 aa3.63□□□□□ -1.83
SMAD4-203ENST00000585448 PRO0255Q9UI72 69 aa3.63□□□□□ -1.83
SMAD4-203ENST00000585448 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 DNAH10OSP0CZ25 163 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 LY6EQ16553 131 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 KRTAP26-1Q6PEX3 210 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 TECTAO75443 2155 aa3.62□□□□□ -1.83
SMAD4-203ENST00000585448 A0A1W2PNU3 283 aaPredicted RBP3.61□□□□□ -1.83
SMAD4-203ENST00000585448 Q5W150 140 aa3.61□□□□□ -1.83
SMAD4-203ENST00000585448 WDR87Q6ZQQ6 2873 aa3.61□□□□□ -1.83
SMAD4-203ENST00000585448 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
SMAD4-203ENST00000585448 TLX1NBP0CAT3 122 aa3.6□□□□□ -1.83
SMAD4-203ENST00000585448 CCL19Q99731 98 aa3.6□□□□□ -1.83
SMAD4-203ENST00000585448 C8orf17Q9NRJ1 99 aa3.6□□□□□ -1.83
SMAD4-203ENST00000585448 AHCTF1Q8WYP5 2266 aa3.59□□□□□ -1.83
SMAD4-203ENST00000585448 SPTBN1Q01082 2364 aaKnown RBP3.59□□□□□ -1.83
SMAD4-203ENST00000585448 LELP1Q5T871 98 aa3.59□□□□□ -1.83
SMAD4-203ENST00000585448 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
SMAD4-203ENST00000585448 SRCAPQ6ZRS2 3230 aa3.58□□□□□ -1.84
SMAD4-203ENST00000585448 DEFB132Q7Z7B7 95 aa3.58□□□□□ -1.84
SMAD4-203ENST00000585448 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
SMAD4-203ENST00000585448 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
SMAD4-203ENST00000585448 FAM186AA6NE01 2351 aa3.57□□□□□ -1.84
SMAD4-203ENST00000585448 CACNA1EQ15878 2313 aa3.57□□□□□ -1.84
SMAD4-203ENST00000585448 SDK1Q7Z5N4 2213 aa3.56□□□□□ -1.84
SMAD4-203ENST00000585448 SPRR1BP22528 89 aa3.56□□□□□ -1.84
SMAD4-203ENST00000585448 C4orf3Q8WVX3 66 aa3.56□□□□□ -1.84
SMAD4-203ENST00000585448 CENPFP49454 3210 aa3.56□□□□□ -1.84
SMAD4-203ENST00000585448 A0A087WTM6 91 aa3.55□□□□□ -1.84
SMAD4-203ENST00000585448 LY6G6CO95867 125 aa3.55□□□□□ -1.84
SMAD4-203ENST00000585448 DEFB136Q30KP8 78 aa3.55□□□□□ -1.84
SMAD4-203ENST00000585448 C15orf56Q8N910 161 aa3.55□□□□□ -1.84
SMAD4-203ENST00000585448 ANAPC11Q9NYG5 84 aa3.55□□□□□ -1.84
SMAD4-203ENST00000585448 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
SMAD4-203ENST00000585448 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-203ENST00000585448 WNK1Q9H4A3 2382 aa3.54□□□□□ -1.84
SMAD4-203ENST00000585448 DEFB130BP0DP73 79 aa3.53□□□□□ -1.84
SMAD4-203ENST00000585448 DEFB130AP0DP74 79 aa3.53□□□□□ -1.84
SMAD4-203ENST00000585448 KRTAP11-1Q8IUC1 163 aa3.53□□□□□ -1.84
SMAD4-203ENST00000585448 GOLGB1Q14789 3259 aaKnown RBP3.52□□□□□ -1.85
SMAD4-203ENST00000585448 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
SMAD4-203ENST00000585448 C10orf99Q6UWK7 81 aa3.52□□□□□ -1.85
SMAD4-203ENST00000585448 PANO1I0J062 215 aa3.51□□□□□ -1.85
SMAD4-203ENST00000585448 KRTAP13-3Q3SY46 172 aa3.51□□□□□ -1.85
SMAD4-203ENST00000585448 CEP350Q5VT06 3117 aa3.51□□□□□ -1.85
SMAD4-203ENST00000585448 CEP250Q9BV73 2442 aa3.5□□□□□ -1.85
SMAD4-203ENST00000585448 A0A096LPF7 62 aa3.5□□□□□ -1.85
SMAD4-203ENST00000585448 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
SMAD4-203ENST00000585448 PKDREJQ9NTG1 2253 aa3.5□□□□□ -1.85
SMAD4-203ENST00000585448 SPTBN2O15020 2390 aa3.49□□□□□ -1.85
SMAD4-203ENST00000585448 CACNA1BQ00975 2339 aa3.49□□□□□ -1.85
SMAD4-203ENST00000585448 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
SMAD4-203ENST00000585448 A0A1W2PNN7 141 aa3.48□□□□□ -1.85
SMAD4-203ENST00000585448 Q96NJ1 140 aa3.48□□□□□ -1.85
SMAD4-203ENST00000585448 COL6A3P12111 3177 aa3.48□□□□□ -1.85
SMAD4-203ENST00000585448 KRTAP10-3P60369 221 aa3.47□□□□□ -1.85
SMAD4-203ENST00000585448 KMT2BQ9UMN6 2715 aaPredicted RBP3.47□□□□□ -1.85
SMAD4-203ENST00000585448 DNAH12Q6ZR08 3092 aa3.45□□□□□ -1.86
SMAD4-203ENST00000585448 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SMAD4-203ENST00000585448 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
SMAD4-203ENST00000585448 PSORS1C2Q9UIG4 136 aa3.45□□□□□ -1.86
SMAD4-203ENST00000585448 NBDYA0A0U1RRE5 68 aa3.44□□□□□ -1.86
SMAD4-203ENST00000585448 H0YAA0 97 aa3.44□□□□□ -1.86
SMAD4-203ENST00000585448 CIRBP-AS1Q8TBR5 109 aa3.44□□□□□ -1.86
SMAD4-203ENST00000585448 A0A1B0GU33 70 aa3.43□□□□□ -1.86
SMAD4-203ENST00000585448 Q6ZSA8 131 aa3.43□□□□□ -1.86
SMAD4-203ENST00000585448 MAP1BP46821 2468 aaKnown RBP3.42□□□□□ -1.86
SMAD4-203ENST00000585448 H3BNG1 76 aa3.42□□□□□ -1.86
SMAD4-203ENST00000585448 H1FX-AS1Q4G0G2 97 aa3.41□□□□□ -1.86
SMAD4-203ENST00000585448 PCNX1Q96RV3 2341 aa3.41□□□□□ -1.86
SMAD4-203ENST00000585448 K7EIL1 84 aa3.4□□□□□ -1.87
SMAD4-203ENST00000585448 SPART-AS1P0CW21 52 aa3.4□□□□□ -1.87
SMAD4-203ENST00000585448 GPR179Q6PRD1 2367 aa3.4□□□□□ -1.87
SMAD4-203ENST00000585448 UTRNP46939 3433 aa3.4□□□□□ -1.87
SMAD4-203ENST00000585448 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
SMAD4-203ENST00000585448 PRLHP81277 87 aa3.39□□□□□ -1.87
SMAD4-203ENST00000585448 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
SMAD4-203ENST00000585448 APC2O95996 2303 aa3.39□□□□□ -1.87
SMAD4-203ENST00000585448 ROS1P08922 2347 aa3.39□□□□□ -1.87
SMAD4-203ENST00000585448 SZT2Q5T011 3432 aa3.38□□□□□ -1.87
SMAD4-203ENST00000585448 LINC01556Q5JQF7 62 aa3.38□□□□□ -1.87
SMAD4-203ENST00000585448 PTPRZ1P23471 2315 aaPredicted RBP3.38□□□□□ -1.87
SMAD4-203ENST00000585448 ZZEF1O43149 2961 aa3.38□□□□□ -1.87
SMAD4-203ENST00000585448 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
SMAD4-203ENST00000585448 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
SMAD4-203ENST00000585448 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
SMAD4-203ENST00000585448 KRTAP1-4P0C5Y4 121 aa3.36□□□□□ -1.87
SMAD4-203ENST00000585448 COL6A6A6NMZ7 2263 aa3.36□□□□□ -1.87
SMAD4-203ENST00000585448 TPRP12270 2363 aaKnown RBP3.36□□□□□ -1.87
SMAD4-203ENST00000585448 MGAQ8IWI9 3026 aa3.35□□□□□ -1.87
SMAD4-203ENST00000585448 CUL9Q8IWT3 2517 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms