RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CNOT1-216ENST00000569240 ZFHX4Q86UP3 3567 aa4.68□□□□□ -1.66
CNOT1-216ENST00000569240 OTOGLQ3ZCN5 2332 aa4.68□□□□□ -1.66
CNOT1-216ENST00000569240 C9orf129Q5T035 196 aaKnown RBP4.68□□□□□ -1.66
CNOT1-216ENST00000569240 SMG1Q96Q15 3661 aaKnown RBP4.68□□□□□ -1.66
CNOT1-216ENST00000569240 OXTP01178 125 aa4.67□□□□□ -1.66
CNOT1-216ENST00000569240 DSCR10P59022 87 aa4.66□□□□□ -1.66
CNOT1-216ENST00000569240 Q8NAQ8 132 aa4.66□□□□□ -1.66
CNOT1-216ENST00000569240 ZFHX3Q15911 3703 aa4.66□□□□□ -1.66
CNOT1-216ENST00000569240 CHTF8P0CG12 524 aa4.66□□□□□ -1.66
CNOT1-216ENST00000569240 SPG11Q96JI7 2443 aa4.65□□□□□ -1.67
CNOT1-216ENST00000569240 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
CNOT1-216ENST00000569240 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
CNOT1-216ENST00000569240 MYO9AB2RTY4 2548 aa4.64□□□□□ -1.67
CNOT1-216ENST00000569240 FAM208BQ5VWN6 2430 aa4.64□□□□□ -1.67
CNOT1-216ENST00000569240 LAMA5O15230 3695 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 TNP2Q05952 138 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 C1orf134Q5TEV5 83 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 CACNA1AO00555 2505 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 CSNK1G2-AS1Q8NCQ2 148 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 PCSK5Q92824 1860 aa4.63□□□□□ -1.67
CNOT1-216ENST00000569240 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
CNOT1-216ENST00000569240 NAV2Q8IVL1 2488 aa4.62□□□□□ -1.67
CNOT1-216ENST00000569240 PLA2G1BP04054 148 aaKnown RBP4.62□□□□□ -1.67
CNOT1-216ENST00000569240 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
CNOT1-216ENST00000569240 C9orf163Q8N9P6 203 aa4.62□□□□□ -1.67
CNOT1-216ENST00000569240 A0A096LNT2 108 aa4.61□□□□□ -1.67
CNOT1-216ENST00000569240 ZCCHC13Q8WW36 166 aaKnown RBP4.61□□□□□ -1.67
CNOT1-216ENST00000569240 VPS13AQ96RL7 3174 aa4.6□□□□□ -1.67
CNOT1-216ENST00000569240 ABCA2Q9BZC7 2435 aa4.6□□□□□ -1.67
CNOT1-216ENST00000569240 LOC400499M0QZD8 3231 aa4.6□□□□□ -1.67
CNOT1-216ENST00000569240 LCE6AA0A183 80 aa4.59□□□□□ -1.67
CNOT1-216ENST00000569240 SPRR1BP22528 89 aa4.59□□□□□ -1.67
CNOT1-216ENST00000569240 M0R2N4 97 aa4.59□□□□□ -1.67
CNOT1-216ENST00000569240 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.67
CNOT1-216ENST00000569240 A6NN06 94 aa4.59□□□□□ -1.68
CNOT1-216ENST00000569240 LY6G6CO95867 125 aa4.58□□□□□ -1.68
CNOT1-216ENST00000569240 A0A1B0GU33 70 aa4.58□□□□□ -1.68
CNOT1-216ENST00000569240 SPRR1AP35321 89 aa4.58□□□□□ -1.68
CNOT1-216ENST00000569240 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
CNOT1-216ENST00000569240 ZNF861PO60384 105 aa4.57□□□□□ -1.68
CNOT1-216ENST00000569240 A0A1W2PPR1 153 aa4.57□□□□□ -1.68
CNOT1-216ENST00000569240 ZNF462Q96JM2 2506 aa4.56□□□□□ -1.68
CNOT1-216ENST00000569240 MMP24-AS1A0A0U1RRL7 71 aa4.56□□□□□ -1.68
CNOT1-216ENST00000569240 HRES1P13985 223 aa4.56□□□□□ -1.68
CNOT1-216ENST00000569240 SPATA8Q6RVD6 105 aa4.56□□□□□ -1.68
CNOT1-216ENST00000569240 LAMA1P25391 3075 aa4.55□□□□□ -1.68
CNOT1-216ENST00000569240 SPACA4Q8TDM5 124 aa4.55□□□□□ -1.68
CNOT1-216ENST00000569240 CSAG1Q6PB30 78 aa4.54□□□□□ -1.68
CNOT1-216ENST00000569240 Q96NJ1 140 aa4.54□□□□□ -1.68
CNOT1-216ENST00000569240 INAFM1C9JVW0 142 aa4.53□□□□□ -1.68
CNOT1-216ENST00000569240 Q6ZR54 194 aa4.53□□□□□ -1.68
CNOT1-216ENST00000569240 KRTAP16-1A8MUX0 517 aa4.53□□□□□ -1.68
CNOT1-216ENST00000569240 COL27A1Q8IZC6 1860 aaPredicted RBP4.53□□□□□ -1.68
CNOT1-216ENST00000569240 PTPN13Q12923 2485 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 PRAC1Q96KF2 57 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 SPINK7P58062 85 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 NBDYA0A0U1RRE5 68 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 TYMSOSQ8TAI1 123 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 BPTFQ12830 3046 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 C19orf73Q9NVV2 129 aa4.52□□□□□ -1.69
CNOT1-216ENST00000569240 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
CNOT1-216ENST00000569240 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
CNOT1-216ENST00000569240 GIG44P09565 113 aaPredicted RBP4.51□□□□□ -1.69
CNOT1-216ENST00000569240 MYO18BQ8IUG5 2567 aa4.51□□□□□ -1.69
CNOT1-216ENST00000569240 TTC28Q96AY4 2481 aa4.49□□□□□ -1.69
CNOT1-216ENST00000569240 SONP18583 2426 aaKnown RBP4.49□□□□□ -1.69
CNOT1-216ENST00000569240 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
CNOT1-216ENST00000569240 RTL8CO15255 209 aa4.49□□□□□ -1.69
CNOT1-216ENST00000569240 FAM168BA1KXE4 195 aa4.48□□□□□ -1.69
CNOT1-216ENST00000569240 ROMO1P60602 79 aa4.48□□□□□ -1.69
CNOT1-216ENST00000569240 EYSQ5T1H1 3165 aa4.48□□□□□ -1.69
CNOT1-216ENST00000569240 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-216ENST00000569240 COX6B2Q6YFQ2 88 aa4.48□□□□□ -1.69
CNOT1-216ENST00000569240 CSMD1Q96PZ7 3565 aa4.47□□□□□ -1.69
CNOT1-216ENST00000569240 MGAQ8IWI9 3026 aa4.46□□□□□ -1.7
CNOT1-216ENST00000569240 TLN1Q9Y490 2541 aaKnown RBP4.46□□□□□ -1.7
CNOT1-216ENST00000569240 FRYLO94915 3013 aa4.46□□□□□ -1.7
CNOT1-216ENST00000569240 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
CNOT1-216ENST00000569240 FREM2Q5SZK8 3169 aa4.45□□□□□ -1.7
CNOT1-216ENST00000569240 TRIOO75962 3097 aa4.44□□□□□ -1.7
CNOT1-216ENST00000569240 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
CNOT1-216ENST00000569240 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
CNOT1-216ENST00000569240 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
CNOT1-216ENST00000569240 HIVEP3Q5T1R4 2406 aa4.43□□□□□ -1.7
CNOT1-216ENST00000569240 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
CNOT1-216ENST00000569240 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
CNOT1-216ENST00000569240 CUL9Q8IWT3 2517 aa4.43□□□□□ -1.7
CNOT1-216ENST00000569240 ZFHX2Q9C0A1 2572 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-216ENST00000569240 MUC6Q6W4X9 2439 aa4.41□□□□□ -1.7
CNOT1-216ENST00000569240 Q5W150 140 aa4.41□□□□□ -1.7
CNOT1-216ENST00000569240 USP9XQ93008 2570 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-216ENST00000569240 WDFY4Q6ZS81 3184 aa4.41□□□□□ -1.7
CNOT1-216ENST00000569240 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
CNOT1-216ENST00000569240 NOTCH2Q04721 2471 aa4.39□□□□□ -1.71
CNOT1-216ENST00000569240 CCDC168Q8NDH2 2452 aa4.39□□□□□ -1.71
CNOT1-216ENST00000569240 A0A1W2PNN7 141 aa4.39□□□□□ -1.71
CNOT1-216ENST00000569240 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms