RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 LCE6AA0A183 80 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 HAMPP81172 84 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 CSNK1G2-AS1Q8NCQ2 148 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
LINC01541-202ENST00000568095 C11orf68Q9H3H3 251 aaKnown RBP3.67□□□□□ -1.82
LINC01541-202ENST00000568095 CD164Q04900 197 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 LINC00612Q8N6U2 182 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 IGKV3OR2-268A0A0C4DH90 116 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 BPY2O14599 106 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 LYSTQ99698 3801 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
LINC01541-202ENST00000568095 PRR15Q8IV56 129 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 DYNLRB2Q8TF09 96 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 WNK1Q9H4A3 2382 aa3.66□□□□□ -1.82
LINC01541-202ENST00000568095 SORL1Q92673 2214 aa3.65□□□□□ -1.82
LINC01541-202ENST00000568095 APOC4P55056 127 aa3.65□□□□□ -1.82
LINC01541-202ENST00000568095 ESRGQ1W209 222 aa3.65□□□□□ -1.82
LINC01541-202ENST00000568095 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.65□□□□□ -1.82
LINC01541-202ENST00000568095 LAMTOR3Q9UHA4 124 aa3.65□□□□□ -1.82
LINC01541-202ENST00000568095 EGFEM1PQ0D2K5 195 aa3.65□□□□□ -1.83
LINC01541-202ENST00000568095 CSMD3Q7Z407 3707 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 TRGV2A0A075B6R0 118 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 TRGV4A0A0C4DH28 118 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 IGHV4-30-4P0DP06 118 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 Q6ZQY7 126 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 Q1T7F1 81 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 Q6ZRU5 148 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 WFDC10AQ9H1F0 79 aa3.64□□□□□ -1.83
LINC01541-202ENST00000568095 CMC4P56277 68 aaPredicted RBP3.64□□□□□ -1.83
LINC01541-202ENST00000568095 STAB1Q9NY15 2570 aa3.63□□□□□ -1.83
LINC01541-202ENST00000568095 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
LINC01541-202ENST00000568095 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
LINC01541-202ENST00000568095 COX7BP24311 80 aa3.63□□□□□ -1.83
LINC01541-202ENST00000568095 ELOF1P60002 83 aaKnown RBP3.63□□□□□ -1.83
LINC01541-202ENST00000568095 C9orf116Q5BN46 136 aaPredicted RBP3.63□□□□□ -1.83
LINC01541-202ENST00000568095 JMJD1CQ15652 2540 aa3.63□□□□□ -1.83
LINC01541-202ENST00000568095 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
LINC01541-202ENST00000568095 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
LINC01541-202ENST00000568095 KRTAP10-11P60412 298 aa3.62□□□□□ -1.83
LINC01541-202ENST00000568095 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
LINC01541-202ENST00000568095 LINC00269Q8N2A0 174 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 CHCHD10Q8WYQ3 142 aaPredicted RBP3.61□□□□□ -1.83
LINC01541-202ENST00000568095 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 DNAH6Q9C0G6 4158 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
LINC01541-202ENST00000568095 C10orf25Q5T742 122 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 SCXQ7RTU7 201 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 COL7A1Q02388 2944 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 KPRPQ5T749 579 aaPredicted RBP3.61□□□□□ -1.83
LINC01541-202ENST00000568095 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
LINC01541-202ENST00000568095 Q6ZRP5 223 aa3.6□□□□□ -1.83
LINC01541-202ENST00000568095 PLECQ15149 4684 aaKnown RBP3.6□□□□□ -1.83
LINC01541-202ENST00000568095 A0A1B0GW54 56 aa3.6□□□□□ -1.83
LINC01541-202ENST00000568095 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
LINC01541-202ENST00000568095 UNQ6190/PRO20217Q6UXQ8 127 aa3.6□□□□□ -1.83
LINC01541-202ENST00000568095 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
LINC01541-202ENST00000568095 HIGD2AQ9BW72 106 aa3.6□□□□□ -1.83
LINC01541-202ENST00000568095 CYP4F30PQ9H0H9 118 aa3.59□□□□□ -1.83
LINC01541-202ENST00000568095 REG3AQ06141 175 aa3.59□□□□□ -1.83
LINC01541-202ENST00000568095 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.84
LINC01541-202ENST00000568095 COL6A5A8TX70 2615 aa3.59□□□□□ -1.84
LINC01541-202ENST00000568095 CLPSL2Q6UWE3 100 aa3.59□□□□□ -1.84
LINC01541-202ENST00000568095 Q8N9L7 120 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 PRO0255Q9UI72 69 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 IGLV5-48A0A075B6I7 105 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
LINC01541-202ENST00000568095 CDK2AP2O75956 126 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 TENM3Q9P273 2699 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 Q8NAQ8 132 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 C6orf48Q9UBA6 75 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 NOTCH3Q9UM47 2321 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 RBM12B-AS1Q9P1G2 102 aa3.57□□□□□ -1.84
LINC01541-202ENST00000568095 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
LINC01541-202ENST00000568095 M0R378 163 aa3.56□□□□□ -1.84
LINC01541-202ENST00000568095 NBEAL2Q6ZNJ1 2754 aa3.56□□□□□ -1.84
LINC01541-202ENST00000568095 IGLV10-54A0A075B6I4 117 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
LINC01541-202ENST00000568095 HIGD2BQ4VC39 106 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 SMIM29Q86T20 159 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 DNAH10Q8IVF4 4471 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 TRAV22A0A0B4J277 110 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 DEFB130BP0DP73 79 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 DEFB130AP0DP74 79 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 KLK12Q9UKR0 248 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
LINC01541-202ENST00000568095 LYRM9A8MSI8 78 aa3.54□□□□□ -1.84
LINC01541-202ENST00000568095 PSCAO43653 123 aa3.54□□□□□ -1.84
LINC01541-202ENST00000568095 LCE3BQ5TA77 95 aa3.54□□□□□ -1.84
LINC01541-202ENST00000568095 Q8N377 158 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms