RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 AHCTF1Q8WYP5 2266 aa1.98□□□□□ -2.09
CHD9-214ENST00000565119 SNRPGP62308 76 aaKnown RBP1.97□□□□□ -2.09
CHD9-214ENST00000565119 CRIP1P50238 77 aa1.96□□□□□ -2.1
CHD9-214ENST00000565119 MROH2BQ7Z745 1585 aa1.95□□□□□ -2.1
CHD9-214ENST00000565119 K7EIL1 84 aa1.95□□□□□ -2.1
CHD9-214ENST00000565119 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
CHD9-214ENST00000565119 DEFB123Q8N688 67 aa1.94□□□□□ -2.1
CHD9-214ENST00000565119 GOLGA4Q13439 2230 aaKnown RBP1.94□□□□□ -2.1
CHD9-214ENST00000565119 TNRC6CQ9HCJ0 1690 aaKnown RBP1.93□□□□□ -2.1
CHD9-214ENST00000565119 FLG2Q5D862 2391 aaPredicted RBP1.93□□□□□ -2.1
CHD9-214ENST00000565119 ZDBF2Q9HCK1 2354 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 I3L2K1 104 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 LYNX1P0DP58 116 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 CRIPTQ9P021 101 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 C4BP0C0L5 1744 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 DUOX1Q9NRD9 1551 aa1.93□□□□□ -2.1
CHD9-214ENST00000565119 SPINK4O60575 86 aa1.92□□□□□ -2.1
CHD9-214ENST00000565119 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
CHD9-214ENST00000565119 FXYD6P3P58550 94 aa1.91□□□□□ -2.1
CHD9-214ENST00000565119 USMG5Q96IX5 58 aa1.91□□□□□ -2.1
CHD9-214ENST00000565119 FBN1P35555 2871 aaKnown RBP1.91□□□□□ -2.1
CHD9-214ENST00000565119 NAV3Q8IVL0 2385 aa1.91□□□□□ -2.1
CHD9-214ENST00000565119 K7EQZ3 153 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 NDUFA3O95167 84 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 KRTAP12-1P59990 96 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 TP53AIP1Q9HCN2 124 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 OTOGLQ3ZCN5 2332 aa1.9□□□□□ -2.11
CHD9-214ENST00000565119 CNOT1A5YKK6 2376 aaKnown RBP1.9□□□□□ -2.11
CHD9-214ENST00000565119 LINC00158P58513 81 aa1.89□□□□□ -2.11
CHD9-214ENST00000565119 Q8IZM0 81 aa1.89□□□□□ -2.11
CHD9-214ENST00000565119 LMO7Q8WWI1 1683 aa1.88□□□□□ -2.11
CHD9-214ENST00000565119 TIMM8BQ9Y5J9 83 aaPredicted RBP1.88□□□□□ -2.11
CHD9-214ENST00000565119 FAM208BQ5VWN6 2430 aa1.88□□□□□ -2.11
CHD9-214ENST00000565119 LYNX1G3V0Z9 82 aa1.87□□□□□ -2.11
CHD9-214ENST00000565119 PIGYQ3MUY2 71 aa1.87□□□□□ -2.11
CHD9-214ENST00000565119 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.87□□□□□ -2.112e-6■■■□□ 17.3
CHD9-214ENST00000565119 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
CHD9-214ENST00000565119 DEFB119Q8N690 84 aa1.87□□□□□ -2.11
CHD9-214ENST00000565119 MRPL34Q9BQ48 92 aaKnown RBP1.87□□□□□ -2.11
CHD9-214ENST00000565119 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
CHD9-214ENST00000565119 CACNA1EQ15878 2313 aa1.86□□□□□ -2.11
CHD9-214ENST00000565119 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
CHD9-214ENST00000565119 CNFNQ9BYD5 112 aa1.86□□□□□ -2.11
CHD9-214ENST00000565119 CNTRLQ7Z7A1 2325 aa1.86□□□□□ -2.11
CHD9-214ENST00000565119 JMJD1CQ15652 2540 aa1.86□□□□□ -2.11
CHD9-214ENST00000565119 CCL22O00626 93 aa1.85□□□□□ -2.11
CHD9-214ENST00000565119 PIEZO2Q9H5I5 2752 aa1.85□□□□□ -2.11
CHD9-214ENST00000565119 COX6A2Q02221 97 aa1.83□□□□□ -2.12
CHD9-214ENST00000565119 LINC00308Q8TCZ7 52 aa1.83□□□□□ -2.12
CHD9-214ENST00000565119 PRO3102Q9H379 93 aa1.83□□□□□ -2.12
CHD9-214ENST00000565119 GCC2Q8IWJ2 1684 aa1.83□□□□□ -2.12
CHD9-214ENST00000565119 ALMS1Q8TCU4 4167 aa1.81□□□□□ -2.12
CHD9-214ENST00000565119 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
CHD9-214ENST00000565119 LOC730098B7Z3J9 87 aa1.8□□□□□ -2.12
CHD9-214ENST00000565119 H0YAA0 97 aa1.8□□□□□ -2.12
CHD9-214ENST00000565119 CLTCL1P53675 1640 aa1.79□□□□□ -2.12
CHD9-214ENST00000565119 ASH1LQ9NR48 2969 aaKnown RBP1.78□□□□□ -2.12
CHD9-214ENST00000565119 SORL1Q92673 2214 aa1.78□□□□□ -2.12
CHD9-214ENST00000565119 SMIM2Q9BVW6 85 aa1.78□□□□□ -2.12
CHD9-214ENST00000565119 DOPEY2Q9Y3R5 2298 aa1.78□□□□□ -2.13
CHD9-214ENST00000565119 COL6A6A6NMZ7 2263 aa1.77□□□□□ -2.13
CHD9-214ENST00000565119 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
CHD9-214ENST00000565119 SPINK9Q5DT21 86 aa1.76□□□□□ -2.13
CHD9-214ENST00000565119 NDUFA1O15239 70 aa1.74□□□□□ -2.13
CHD9-214ENST00000565119 TFF3Q07654 80 aa1.74□□□□□ -2.13
CHD9-214ENST00000565119 MINOS1Q5TGZ0 78 aa1.74□□□□□ -2.13
CHD9-214ENST00000565119 Q5VSD8 79 aa1.74□□□□□ -2.13
CHD9-214ENST00000565119 PRO0255Q9UI72 69 aa1.74□□□□□ -2.13
CHD9-214ENST00000565119 Q6ZSA8 131 aa1.73□□□□□ -2.13
CHD9-214ENST00000565119 PTPRZ1P23471 2315 aaPredicted RBP1.73□□□□□ -2.13
CHD9-214ENST00000565119 SPRR1AP35321 89 aa1.72□□□□□ -2.13
CHD9-214ENST00000565119 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
CHD9-214ENST00000565119 C6orf48Q9UBA6 75 aa1.72□□□□□ -2.13
CHD9-214ENST00000565119 J3QKU1 62 aa1.71□□□□□ -2.14
CHD9-214ENST00000565119 LELP1Q5T871 98 aa1.71□□□□□ -2.14
CHD9-214ENST00000565119 PLCE1Q9P212 2302 aa1.7□□□□□ -2.14
CHD9-214ENST00000565119 PTPRQQ9UMZ3 2332 aa1.69□□□□□ -2.14
CHD9-214ENST00000565119 RP1L1Q8IWN7 2480 aaPredicted RBP1.67□□□□□ -2.14
CHD9-214ENST00000565119 RPS27P42677 84 aaKnown RBP1.67□□□□□ -2.14
CHD9-214ENST00000565119 H1FX-AS1Q4G0G2 97 aa1.67□□□□□ -2.14
CHD9-214ENST00000565119 RPS27LQ71UM5 84 aaKnown RBP1.67□□□□□ -2.14
CHD9-214ENST00000565119 A0A0D9SG42 100 aa1.66□□□□□ -2.14
CHD9-214ENST00000565119 IAPPP10997 89 aa1.66□□□□□ -2.14
CHD9-214ENST00000565119 PRB3Q04118 309 aaPredicted RBP1.66□□□□□ -2.14
CHD9-214ENST00000565119 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
CHD9-214ENST00000565119 USF3Q68DE3 2245 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 DEFB130BP0DP73 79 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 DEFB130AP0DP74 79 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 SPRR1BP22528 89 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 WFDC13Q8IUB5 93 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
CHD9-214ENST00000565119 REV3LO60673 3130 aa1.64□□□□□ -2.15
CHD9-214ENST00000565119 KRTAP21-3Q3LHN1 58 aa1.64□□□□□ -2.15
CHD9-214ENST00000565119 C2CD3Q4AC94 2353 aa1.64□□□□□ -2.15
CHD9-214ENST00000565119 ZNF462Q96JM2 2506 aa1.62□□□□□ -2.15
CHD9-214ENST00000565119 ROS1P08922 2347 aa1.62□□□□□ -2.15
CHD9-214ENST00000565119 WNK2Q9Y3S1 2297 aa1.61□□□□□ -2.15
CHD9-214ENST00000565119 IGLV5-48A0A075B6I7 105 aa1.6□□□□□ -2.15
CHD9-214ENST00000565119 MEGF8Q7Z7M0 2845 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms