RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 DMDP11532 3685 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 IFI27P40305 119 aaPredicted RBP0.94□□□□□ -2.26
RTF1-207ENST00000561076 PCOTHQ58A44 107 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 C10orf113Q5VZT2 155 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 UBE2DNLQ8IWF7 75 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 PTPRQQ9UMZ3 2332 aa0.94□□□□□ -2.26
RTF1-207ENST00000561076 ATRQ13535 2644 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 IGF2RP11717 2491 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 CCDC168Q8NDH2 2452 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 MED12Q93074 2177 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 VPS13AQ96RL7 3174 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 SPEGQ15772 3267 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 A0A1B0GU69 56 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 LY6G6CO95867 125 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 RPL38P63173 70 aaKnown RBP0.93□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP1-1Q07627 177 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 WFDC9Q8NEX5 89 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP4-5Q9BYR2 181 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 UBE2D4Q9Y2X8 147 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 COL5A1P20908 1838 aaPredicted RBP0.93□□□□□ -2.26
RTF1-207ENST00000561076 ANKHD1Q8IWZ3 2542 aaKnown RBP0.93□□□□□ -2.26
RTF1-207ENST00000561076 TRIOO75962 3097 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 UBR5O95071 2799 aaPredicted RBP0.93□□□□□ -2.26
RTF1-207ENST00000561076 NBEAL2Q6ZNJ1 2754 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 CEP295Q9C0D2 2601 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 ACACAQ13085 2346 aa0.93□□□□□ -2.26
RTF1-207ENST00000561076 SDK1Q7Z5N4 2213 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 A0A087WWC5 75 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 GVQW2A0A096LPI5 108 aaPredicted RBP0.92□□□□□ -2.26
RTF1-207ENST00000561076 ANGP03950 147 aaKnown RBP0.92□□□□□ -2.26
RTF1-207ENST00000561076 COX6B1P14854 86 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP12-1P59990 96 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP10-1P60331 282 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP10-6P60371 365 aaPredicted RBP0.92□□□□□ -2.26
RTF1-207ENST00000561076 KRTAP10-8P60410 259 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 ATXN8Q156A1 80 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 DEFB112Q30KQ8 113 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 DEFB121Q5J5C9 76 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 SSBP3-AS1Q7Z2R9 100 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 GAFA1Q96PS6 74 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 PROK2Q9HC23 129 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 NBEAL1Q6ZS30 2694 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 SMG1Q96Q15 3661 aaKnown RBP0.92□□□□□ -2.26
RTF1-207ENST00000561076 FRYQ5TBA9 3013 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 IGSF10Q6WRI0 2623 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 ZZEF1O43149 2961 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 STAB1Q9NY15 2570 aa0.92□□□□□ -2.26
RTF1-207ENST00000561076 TLN1Q9Y490 2541 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 AHCTF1Q8WYP5 2266 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 PDCD11Q14690 1871 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 ASCC3Q8N3C0 2202 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 FRYLO94915 3013 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 DMXL2Q8TDJ6 3036 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 APC2O95996 2303 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 A0A096LNT2 108 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 RPL37P61927 97 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 DEFB109BQ30KR1 87 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 Q5BKY6 102 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 LCE3EQ5T5B0 92 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 SPATA8Q6RVD6 105 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 ZCCHC13Q8WW36 166 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 SPRR4Q96PI1 79 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 DOCK11Q5JSL3 2073 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 TNRC6BQ9UPQ9 1833 aaKnown RBP0.91□□□□□ -2.26
RTF1-207ENST00000561076 COL6A6A6NMZ7 2263 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 DOPEY2Q9Y3R5 2298 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 F5P12259 2224 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 LOC400499M0QZD8 3231 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 ITPR1Q14643 2758 aa0.91□□□□□ -2.26
RTF1-207ENST00000561076 NBEAQ8NFP9 2946 aa0.9□□□□□ -2.26
RTF1-207ENST00000561076 UBR4Q5T4S7 5183 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 A0A0D9SFI3 127 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 C10orf142B7Z368 130 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 LYNX1P0DP58 116 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 COX8AP10176 69 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 KRTAP10-5P60370 271 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 CACNA1EQ15878 2313 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 FLNAP21333 2647 aaKnown RBP0.9□□□□□ -2.27
RTF1-207ENST00000561076 DNHD1Q96M86 4753 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 TENM4Q6N022 2769 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 LAMA5O15230 3695 aa0.9□□□□□ -2.27
RTF1-207ENST00000561076 LAMA4Q16363 1823 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 KNTC1P50748 2209 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 GOLGA4Q13439 2230 aaKnown RBP0.89□□□□□ -2.27
RTF1-207ENST00000561076 VWFP04275 2813 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 PCLOQ9Y6V0 5065 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 FREM2Q5SZK8 3169 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 TRBV7-4A0A0J9YYF1 115 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 HMGA1P17096 107 aaKnown RBP0.89□□□□□ -2.27
RTF1-207ENST00000561076 Q6ZSA8 131 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 HILPDAQ9Y5L2 63 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 PKD1L1Q8TDX9 2849 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 FBN1P35555 2871 aaKnown RBP0.89□□□□□ -2.27
RTF1-207ENST00000561076 CELSR3Q9NYQ7 3312 aa0.89□□□□□ -2.27
RTF1-207ENST00000561076 AKAP13Q12802 2813 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 ZFHX3Q15911 3703 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 KIAA1109Q2LD37 5005 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 MYH4Q9Y623 1939 aa0.88□□□□□ -2.27
RTF1-207ENST00000561076 F8P00451 2351 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms