RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
MTHFD1-210ENST00000555252 ESRGQ1W209 222 aa7.1□□□□□ -1.27
MTHFD1-210ENST00000555252 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
MTHFD1-210ENST00000555252 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
MTHFD1-210ENST00000555252 VPREB1P12018 145 aa7.09□□□□□ -1.27
MTHFD1-210ENST00000555252 LINC00474Q9P2X8 69 aa7.09□□□□□ -1.27
MTHFD1-210ENST00000555252 F8WDY8 70 aa7.08□□□□□ -1.28
MTHFD1-210ENST00000555252 EGFEM1PQ0D2K5 195 aa7.08□□□□□ -1.28
MTHFD1-210ENST00000555252 HIGD2BQ4VC39 106 aa7.08□□□□□ -1.28
MTHFD1-210ENST00000555252 LCE6AA0A183 80 aa7.07□□□□□ -1.28
MTHFD1-210ENST00000555252 Q6ZTC4 211 aa7.07□□□□□ -1.28
MTHFD1-210ENST00000555252 ATRQ13535 2644 aa7.07□□□□□ -1.28
MTHFD1-210ENST00000555252 TENM1Q9UKZ4 2725 aa7.07□□□□□ -1.28
MTHFD1-210ENST00000555252 KPRPQ5T749 579 aaPredicted RBP7.07□□□□□ -1.28
MTHFD1-210ENST00000555252 BRK1Q8WUW1 75 aa7.05□□□□□ -1.28
MTHFD1-210ENST00000555252 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
MTHFD1-210ENST00000555252 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
MTHFD1-210ENST00000555252 KRTAP10-11P60412 298 aa7.04□□□□□ -1.28
MTHFD1-210ENST00000555252 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 OXLD1Q5BKU9 147 aa7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 C1orf195Q5TG92 126 aa7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 CAMK2N2Q96S95 79 aa7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 FBN1P35555 2871 aaKnown RBP7.03□□□□□ -1.28
MTHFD1-210ENST00000555252 KRTAP26-1Q6PEX3 210 aa7.02□□□□□ -1.29
MTHFD1-210ENST00000555252 RETNQ9HD89 108 aa7.02□□□□□ -1.29
MTHFD1-210ENST00000555252 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
MTHFD1-210ENST00000555252 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
MTHFD1-210ENST00000555252 Q1T7F1 81 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 Q8N9L7 120 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 HIGD2AQ9BW72 106 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 VWFP04275 2813 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 LINC01556Q5JQF7 62 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 MPLKIPQ8TAP9 179 aa7□□□□□ -1.29
MTHFD1-210ENST00000555252 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
MTHFD1-210ENST00000555252 V9GYY9 64 aa6.99□□□□□ -1.29
MTHFD1-210ENST00000555252 PRR15Q8IV56 129 aa6.99□□□□□ -1.29
MTHFD1-210ENST00000555252 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
MTHFD1-210ENST00000555252 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
MTHFD1-210ENST00000555252 C15orf56Q8N910 161 aa6.98□□□□□ -1.29
MTHFD1-210ENST00000555252 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
MTHFD1-210ENST00000555252 NBEAL2Q6ZNJ1 2754 aa6.98□□□□□ -1.29
MTHFD1-210ENST00000555252 Q6ZRU5 148 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 Q8N377 158 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 CYP4F30PQ9H0H9 118 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 C3orf84H3BNL1 204 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 KRTAP24-1Q3LI83 254 aa6.97□□□□□ -1.29
MTHFD1-210ENST00000555252 ETDCA0A1B0GVM5 59 aa6.96□□□□□ -1.29
MTHFD1-210ENST00000555252 TNP2Q05952 138 aa6.96□□□□□ -1.29
MTHFD1-210ENST00000555252 SPRR4Q96PI1 79 aa6.96□□□□□ -1.29
MTHFD1-210ENST00000555252 PLA2G2DQ9UNK4 145 aa6.96□□□□□ -1.29
MTHFD1-210ENST00000555252 Q8NBF4 154 aa6.96□□□□□ -1.3
MTHFD1-210ENST00000555252 STAB1Q9NY15 2570 aa6.96□□□□□ -1.3
MTHFD1-210ENST00000555252 DNAH10OSP0CZ25 163 aa6.95□□□□□ -1.3
MTHFD1-210ENST00000555252 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
MTHFD1-210ENST00000555252 COL6A5A8TX70 2615 aa6.94□□□□□ -1.3
MTHFD1-210ENST00000555252 IGKV2D-24A0A075B6R9 120 aa6.94□□□□□ -1.3
MTHFD1-210ENST00000555252 NDUFB1O75438 58 aa6.94□□□□□ -1.3
MTHFD1-210ENST00000555252 FAM30AQ9NZY2 134 aa6.94□□□□□ -1.3
MTHFD1-210ENST00000555252 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
MTHFD1-210ENST00000555252 A0A1W2PNM2 257 aa6.93□□□□□ -1.3
MTHFD1-210ENST00000555252 Q6ZRX8 168 aa6.93□□□□□ -1.3
MTHFD1-210ENST00000555252 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 C1orf137Q5JT78 98 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 Q6ZRP5 223 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 IGLV5-37A0A075B6J1 123 aa6.92□□□□□ -1.3
MTHFD1-210ENST00000555252 SPRR1AP35321 89 aa6.91□□□□□ -1.3
MTHFD1-210ENST00000555252 C7orf33Q8WU49 177 aa6.91□□□□□ -1.3
MTHFD1-210ENST00000555252 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.3
MTHFD1-210ENST00000555252 DSCR10P59022 87 aa6.9□□□□□ -1.3
MTHFD1-210ENST00000555252 DEFB105AQ8NG35 78 aa6.89□□□□□ -1.31
MTHFD1-210ENST00000555252 MDFIQ99750 246 aa6.89□□□□□ -1.31
MTHFD1-210ENST00000555252 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
MTHFD1-210ENST00000555252 SEC61GP60059 68 aa6.89□□□□□ -1.31
MTHFD1-210ENST00000555252 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.88□□□□□ -1.31
MTHFD1-210ENST00000555252 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
MTHFD1-210ENST00000555252 H3BPC8 53 aa6.87□□□□□ -1.31
MTHFD1-210ENST00000555252 PKD1L1Q8TDX9 2849 aa6.87□□□□□ -1.31
MTHFD1-210ENST00000555252 Q9BRP9 147 aa6.86□□□□□ -1.31
MTHFD1-210ENST00000555252 LINC00588Q9Y4M8 146 aa6.86□□□□□ -1.31
MTHFD1-210ENST00000555252 K7EQZ3 153 aa6.86□□□□□ -1.31
MTHFD1-210ENST00000555252 PMAIP1Q13794 54 aa6.86□□□□□ -1.31
MTHFD1-210ENST00000555252 SERTAD4-AS1Q5TG53 156 aa6.86□□□□□ -1.31
MTHFD1-210ENST00000555252 MP68P56378 58 aa6.85□□□□□ -1.31
MTHFD1-210ENST00000555252 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
MTHFD1-210ENST00000555252 TRAV22A0A0B4J277 110 aa6.85□□□□□ -1.31
MTHFD1-210ENST00000555252 PSCAO43653 123 aa6.85□□□□□ -1.31
MTHFD1-210ENST00000555252 DNHD1Q96M86 4753 aa6.82□□□□□ -1.32
MTHFD1-210ENST00000555252 IGLV8-61A0A075B6I0 122 aa6.81□□□□□ -1.32
MTHFD1-210ENST00000555252 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
MTHFD1-210ENST00000555252 B9D2Q9BPU9 175 aa6.81□□□□□ -1.32
MTHFD1-210ENST00000555252 ANK2Q01484 3957 aa6.81□□□□□ -1.32
MTHFD1-210ENST00000555252 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
MTHFD1-210ENST00000555252 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
MTHFD1-210ENST00000555252 K7EIL1 84 aa6.8□□□□□ -1.32
MTHFD1-210ENST00000555252 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms