RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LINC00612Q8N6U2 182 aa9.23□□□□□ -0.93
VTI1B-204ENST00000554659 CD164Q04900 197 aa9.23□□□□□ -0.93
VTI1B-204ENST00000554659 IGFL1Q6UW32 110 aa9.23□□□□□ -0.93
VTI1B-204ENST00000554659 SPTBN4Q9H254 2564 aa9.22□□□□□ -0.93
VTI1B-204ENST00000554659 APLNQ9ULZ1 77 aa9.22□□□□□ -0.93
VTI1B-204ENST00000554659 GIG44P09565 113 aaPredicted RBP9.22□□□□□ -0.93
VTI1B-204ENST00000554659 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
VTI1B-204ENST00000554659 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.94
VTI1B-204ENST00000554659 PRR15Q8IV56 129 aa9.2□□□□□ -0.94
VTI1B-204ENST00000554659 Q8N377 158 aa9.2□□□□□ -0.94
VTI1B-204ENST00000554659 H7BZZ5 65 aa9.2□□□□□ -0.94
VTI1B-204ENST00000554659 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
VTI1B-204ENST00000554659 POLQO75417 2590 aa9.19□□□□□ -0.94
VTI1B-204ENST00000554659 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
VTI1B-204ENST00000554659 PLA2G2DQ9UNK4 145 aa9.18□□□□□ -0.94
VTI1B-204ENST00000554659 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
VTI1B-204ENST00000554659 C9orf129Q5T035 196 aaKnown RBP9.18□□□□□ -0.94
VTI1B-204ENST00000554659 A0A096LNT2 108 aa9.18□□□□□ -0.94
VTI1B-204ENST00000554659 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
VTI1B-204ENST00000554659 DSCR10P59022 87 aa9.16□□□□□ -0.94
VTI1B-204ENST00000554659 KTN1-AS1Q86SY8 53 aa9.16□□□□□ -0.94
VTI1B-204ENST00000554659 HTTP42858 3142 aa9.15□□□□□ -0.95
VTI1B-204ENST00000554659 LCA10Q71F78 164 aa9.14□□□□□ -0.95
VTI1B-204ENST00000554659 LAMA2P24043 3122 aaKnown RBP9.14□□□□□ -0.95
VTI1B-204ENST00000554659 C5orf42Q9H799 3197 aa9.13□□□□□ -0.95
VTI1B-204ENST00000554659 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
VTI1B-204ENST00000554659 A0A1W2PNN7 141 aa9.13□□□□□ -0.95
VTI1B-204ENST00000554659 FASNP49327 2511 aaKnown RBP9.12□□□□□ -0.95
VTI1B-204ENST00000554659 LAMA3Q16787 3333 aa9.12□□□□□ -0.95
VTI1B-204ENST00000554659 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
VTI1B-204ENST00000554659 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
VTI1B-204ENST00000554659 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
VTI1B-204ENST00000554659 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
VTI1B-204ENST00000554659 ZNF861PO60384 105 aa9.06□□□□□ -0.96
VTI1B-204ENST00000554659 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
VTI1B-204ENST00000554659 A0A1W2PNM2 257 aa9.06□□□□□ -0.96
VTI1B-204ENST00000554659 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
VTI1B-204ENST00000554659 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
VTI1B-204ENST00000554659 RANBP2P49792 3224 aaKnown RBP9.04□□□□□ -0.96
VTI1B-204ENST00000554659 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
VTI1B-204ENST00000554659 IGLV5-48A0A075B6I7 105 aa9.03□□□□□ -0.96
VTI1B-204ENST00000554659 K7EIL1 84 aa9.02□□□□□ -0.96
VTI1B-204ENST00000554659 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
VTI1B-204ENST00000554659 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
VTI1B-204ENST00000554659 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.97
VTI1B-204ENST00000554659 A0A0D9SG42 100 aa9□□□□□ -0.97
VTI1B-204ENST00000554659 BPTFQ12830 3046 aa9□□□□□ -0.97
VTI1B-204ENST00000554659 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
VTI1B-204ENST00000554659 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
VTI1B-204ENST00000554659 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
VTI1B-204ENST00000554659 ANAPC11Q9NYG5 84 aa8.99□□□□□ -0.97
VTI1B-204ENST00000554659 CNBPP62633 177 aaKnown RBP8.99□□□□□ -0.97
VTI1B-204ENST00000554659 WWC2-AS2Q96NR7 200 aa8.99□□□□□ -0.97
VTI1B-204ENST00000554659 UNC80Q8N2C7 3258 aa8.98□□□□□ -0.97
VTI1B-204ENST00000554659 CHD7Q9P2D1 2997 aa8.97□□□□□ -0.97
VTI1B-204ENST00000554659 A0A087WTM6 91 aa8.97□□□□□ -0.97
VTI1B-204ENST00000554659 LINC01554Q52M75 96 aa8.97□□□□□ -0.97
VTI1B-204ENST00000554659 SPRR4Q96PI1 79 aa8.96□□□□□ -0.97
VTI1B-204ENST00000554659 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
VTI1B-204ENST00000554659 Q8N1X5 172 aa8.95□□□□□ -0.98
VTI1B-204ENST00000554659 CASC10Q5T4H9 136 aa8.94□□□□□ -0.98
VTI1B-204ENST00000554659 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
VTI1B-204ENST00000554659 PRR26Q8N8Z3 221 aa8.93□□□□□ -0.98
VTI1B-204ENST00000554659 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
VTI1B-204ENST00000554659 J3QL48 77 aa8.92□□□□□ -0.98
VTI1B-204ENST00000554659 LUZP6Q538Z0 58 aa8.91□□□□□ -0.98
VTI1B-204ENST00000554659 PSORS1C2Q9UIG4 136 aa8.91□□□□□ -0.98
VTI1B-204ENST00000554659 KRTAP1-3Q8IUG1 177 aa8.9□□□□□ -0.98
VTI1B-204ENST00000554659 Q1T7F1 81 aa8.89□□□□□ -0.99
VTI1B-204ENST00000554659 CDH23Q9H251 3354 aa8.89□□□□□ -0.99
VTI1B-204ENST00000554659 KRTAP1-1Q07627 177 aa8.85□□□□□ -0.99
VTI1B-204ENST00000554659 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
VTI1B-204ENST00000554659 WIPF1O43516 503 aa8.84□□□□□ -0.99
VTI1B-204ENST00000554659 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
VTI1B-204ENST00000554659 EPG5Q9HCE0 2579 aa8.83□□□□□ -1
VTI1B-204ENST00000554659 PRUNE2Q8WUY3 3088 aa8.82□□□□□ -1
VTI1B-204ENST00000554659 ATRQ13535 2644 aa8.82□□□□□ -1
VTI1B-204ENST00000554659 PRRC2CQ9Y520 2896 aaKnown RBP8.82□□□□□ -1
VTI1B-204ENST00000554659 A0A0C4DFX4 3053 aa8.81□□□□□ -1
VTI1B-204ENST00000554659 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
VTI1B-204ENST00000554659 CR1P17927 2039 aa8.78□□□□□ -1
VTI1B-204ENST00000554659 FLNBO75369 2602 aaKnown RBP8.77□□□□□ -1.01
VTI1B-204ENST00000554659 CHD9Q3L8U1 2897 aa8.76□□□□□ -1.01
VTI1B-204ENST00000554659 A0A1B0GU33 70 aa8.76□□□□□ -1.01
VTI1B-204ENST00000554659 Q75L30 129 aa8.75□□□□□ -1.01
VTI1B-204ENST00000554659 XIRP2A4UGR9 3374 aa8.73□□□□□ -1.01
VTI1B-204ENST00000554659 MAST4O15021 2626 aa8.73□□□□□ -1.01
VTI1B-204ENST00000554659 HRES1P13985 223 aa8.72□□□□□ -1.01
VTI1B-204ENST00000554659 Q5XG85 94 aa8.72□□□□□ -1.01
VTI1B-204ENST00000554659 PRAC1Q96KF2 57 aa8.72□□□□□ -1.01
VTI1B-204ENST00000554659 Q8NDZ9 215 aa8.72□□□□□ -1.01
VTI1B-204ENST00000554659 SPRR1AP35321 89 aa8.71□□□□□ -1.02
VTI1B-204ENST00000554659 FAM229BQ4G0N7 80 aa8.7□□□□□ -1.02
VTI1B-204ENST00000554659 DNAH14Q0VDD8 3507 aa8.7□□□□□ -1.02
VTI1B-204ENST00000554659 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
VTI1B-204ENST00000554659 H3BS24 57 aa8.7□□□□□ -1.02
VTI1B-204ENST00000554659 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
VTI1B-204ENST00000554659 Q8N9P0 234 aaPredicted RBP8.69□□□□□ -1.02
VTI1B-204ENST00000554659 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
VTI1B-204ENST00000554659 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms