RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 REG3GQ6UW15 175 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 ST20-AS1Q8NBB2 130 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 TP53AIP1Q9HCN2 124 aa2.79□□□□□ -1.96
SNHG1-219ENST00000542112 SPTAN1Q13813 2472 aaKnown RBP2.79□□□□□ -1.96
SNHG1-219ENST00000542112 ASPMQ8IZT6 3477 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 CFAP47Q6ZTR5 3102 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 ZFYVE26Q68DK2 2539 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 BOD1L1Q8NFC6 3051 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 HRNRQ86YZ3 2850 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-219ENST00000542112 GVQW2A0A096LPI5 108 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-219ENST00000542112 IGLV9-49A0A0B4J1Y8 123 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 KRTAP16-1A8MUX0 517 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 MIR22HGQ0VDD5 57 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 PRR4Q16378 134 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 CSAG1Q6PB30 78 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 Q8N9L7 120 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 Q8N9W7 124 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 Q8NBF4 154 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 RHPN1-AS1Q9BWJ2 59 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 ITPR1Q14643 2758 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 USP9XQ93008 2570 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-219ENST00000542112 ZZEF1O43149 2961 aa2.78□□□□□ -1.96
SNHG1-219ENST00000542112 CFAP46Q8IYW2 2715 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 DSCR10P59022 87 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 C1orf137Q5JT78 98 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 Q8NDZ9 215 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 DEFB104AQ8WTQ1 72 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 EPG5Q9HCE0 2579 aa2.77□□□□□ -1.97
SNHG1-219ENST00000542112 DOPEY1Q5JWR5 2465 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 IGLV10-54A0A075B6I4 117 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 A0A0J9YWU9 116 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 LINC00959A0A1B0GUT2 108 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 KRTAP29-1A8MX34 341 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-219ENST00000542112 COX7A1P24310 79 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.76□□□□□ -1.972e-19■■■■■ 91.2
SNHG1-219ENST00000542112 DOPEY2Q9Y3R5 2298 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 FAM208BQ5VWN6 2430 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 SPG11Q96JI7 2443 aa2.76□□□□□ -1.97
SNHG1-219ENST00000542112 ABCA1O95477 2261 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 CR1P17927 2039 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 KMT2BQ9UMN6 2715 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-219ENST00000542112 IGHV3-74A0A0B4J1X5 117 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 K7ERS5 55 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 Q6ZR54 194 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 DHRS4-AS1Q9P1J3 65 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 KLK12Q9UKR0 248 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 FLNCQ14315 2725 aa2.75□□□□□ -1.97
SNHG1-219ENST00000542112 KALRNO60229 2985 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 NBEAQ8NFP9 2946 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 K7EQZ3 153 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 PRB3Q04118 309 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-219ENST00000542112 ADM2Q7Z4H4 148 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 KRTAP4-5Q9BYR2 181 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
SNHG1-219ENST00000542112 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 RPL37AP8A6NKH3 93 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 A8MWP4 228 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 INSP01308 110 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 SPINK13Q1W4C9 94 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 PRR34Q9NV39 138 aa2.73□□□□□ -1.97
SNHG1-219ENST00000542112 MYO18BQ8IUG5 2567 aa2.72□□□□□ -1.97
SNHG1-219ENST00000542112 ZNF462Q96JM2 2506 aa2.72□□□□□ -1.97
SNHG1-219ENST00000542112 A0A1B0GU69 56 aa2.72□□□□□ -1.97
SNHG1-219ENST00000542112 ACYP2P14621 99 aa2.72□□□□□ -1.97
SNHG1-219ENST00000542112 PTPN13Q12923 2485 aa2.72□□□□□ -1.97
SNHG1-219ENST00000542112 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
SNHG1-219ENST00000542112 LRRK2Q5S007 2527 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 A0A1W2PPR1 153 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 ZNF861PO60384 105 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 IGKV3-20P01619 116 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 PRB1P04280 392 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 HRES1P13985 223 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 DEFB131AP59861 70 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 C5orf56Q8N8D9 126 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 CAMK2N2Q96S95 79 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 ADGRG4Q8IZF6 3080 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 LRBAP50851 2863 aa2.71□□□□□ -1.98
SNHG1-219ENST00000542112 CHD6Q8TD26 2715 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 USP9YO00507 2555 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-219ENST00000542112 IGKV3-7A0A075B6H7 116 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 LYNX1G3V0Z9 82 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 KRTAP10-11P60412 298 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 REG3AQ06141 175 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 RELNP78509 3460 aa2.7□□□□□ -1.98
SNHG1-219ENST00000542112 UBR5O95071 2799 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-219ENST00000542112 IGLV8-61A0A075B6I0 122 aa2.69□□□□□ -1.98
SNHG1-219ENST00000542112 G3V318 75 aa2.69□□□□□ -1.98
SNHG1-219ENST00000542112 ANGP03950 147 aaKnown RBP2.69□□□□□ -1.98
SNHG1-219ENST00000542112 CHTF8P0CG12 524 aa2.69□□□□□ -1.98
SNHG1-219ENST00000542112 CMC4P56277 68 aaPredicted RBP2.69□□□□□ -1.98
SNHG1-219ENST00000542112 DEFB1P60022 68 aa2.69□□□□□ -1.98
SNHG1-219ENST00000542112 Q8N377 158 aa2.69□□□□□ -1.98
SNHG1-219ENST00000542112 SMG1Q96Q15 3661 aaKnown RBP2.69□□□□□ -1.98
SNHG1-219ENST00000542112 NUPR2A6NF83 97 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms