RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 FAM215AQ9Y5M1 114 aa2.53□□□□□ -2
CTR9-205ENST00000529898 ABCA2Q9BZC7 2435 aa2.53□□□□□ -2
CTR9-205ENST00000529898 TPRP12270 2363 aaKnown RBP2.52□□□□□ -2.01
CTR9-205ENST00000529898 OTOGLQ3ZCN5 2332 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 IGLV10-54A0A075B6I4 117 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 TRGV4A0A0C4DH28 118 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 IGHV3-66A0A0C4DH42 116 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 CLPSL1A2RUU4 121 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 APELAP0DMC3 54 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 COX7A1P24310 79 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 CCL18P55774 89 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 CRYBG3Q68DQ2 2970 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 COA5Q86WW8 74 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 CSNK1G2-AS1Q8NCQ2 148 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 DPM3Q9P2X0 92 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 PTPRQQ9UMZ3 2332 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 ABCA4P78363 2273 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 MED13LQ71F56 2210 aa2.52□□□□□ -2.01
CTR9-205ENST00000529898 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 RELNP78509 3460 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 IGLV11-55A0A075B6I3 123 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 UQCR11O14957 56 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 IGHV1-8P0DP01 117 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 LINC00158P58513 81 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 COX17Q14061 63 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 C1orf137Q5JT78 98 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 CASC10Q5T4H9 136 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 CSAG1Q6PB30 78 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 C9orf163Q8N9P6 203 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 CACNA1BQ00975 2339 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 ACACAQ13085 2346 aa2.51□□□□□ -2.01
CTR9-205ENST00000529898 ANKHD1Q8IWZ3 2542 aaKnown RBP2.5□□□□□ -2.01
CTR9-205ENST00000529898 CACNA1HO95180 2353 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 SPINK7P58062 85 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 PRB3Q04118 309 aaPredicted RBP2.5□□□□□ -2.01
CTR9-205ENST00000529898 DEFB112Q30KQ8 113 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 LINC01006Q8NI28 216 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 SPRR4Q96PI1 79 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 CHCHD7Q9BUK0 85 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 KAAG1Q9UBP8 84 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 VPS13CQ709C8 3753 aa2.5□□□□□ -2.01
CTR9-205ENST00000529898 SPTBN1Q01082 2364 aaKnown RBP2.5□□□□□ -2.01
CTR9-205ENST00000529898 MAP1BP46821 2468 aaKnown RBP2.49□□□□□ -2.01
CTR9-205ENST00000529898 A0A096LNT2 108 aa2.49□□□□□ -2.01
CTR9-205ENST00000529898 PRR4Q16378 134 aa2.49□□□□□ -2.01
CTR9-205ENST00000529898 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
CTR9-205ENST00000529898 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
CTR9-205ENST00000529898 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
CTR9-205ENST00000529898 CELSR2Q9HCU4 2923 aa2.49□□□□□ -2.01
CTR9-205ENST00000529898 SVEP1Q4LDE5 3571 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 IGLV1-50A0A075B6I6 118 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 DEFB131BA0A096LNP1 70 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 PRR9Q5T870 116 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 Q6ZQY7 126 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 C8orf17Q9NRJ1 99 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 SORL1Q92673 2214 aa2.48□□□□□ -2.01
CTR9-205ENST00000529898 AKAP9Q99996 3911 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 EP300Q09472 2414 aaPredicted RBP2.47□□□□□ -2.01
CTR9-205ENST00000529898 LINC00959A0A1B0GUT2 108 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 ODF3BA8MYP8 253 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 KRTAP4-16G5E9R7 235 aaPredicted RBP2.47□□□□□ -2.01
CTR9-205ENST00000529898 EGFEM1PQ0D2K5 195 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 DEFB109BQ30KR1 87 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
CTR9-205ENST00000529898 LYNX1G3V0Z9 82 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 M0R2N4 97 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 LYNX1P0DP58 116 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 LUZP6Q538Z0 58 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 COL12A1Q99715 3063 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 GVINP1Q7Z2Y8 2422 aa2.46□□□□□ -2.02
CTR9-205ENST00000529898 IGLV5-48A0A075B6I7 105 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 IGKV2D-24A0A075B6R9 120 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 A8MWP4 228 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 COX6A2Q02221 97 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 KRTAP26-1Q6PEX3 210 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 Q8IZM0 81 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 DOPEY2Q9Y3R5 2298 aa2.45□□□□□ -2.02
CTR9-205ENST00000529898 HIVEP3Q5T1R4 2406 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 COL6A6A6NMZ7 2263 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 TTC28Q96AY4 2481 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 NUPR2A6NF83 97 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 ZNF861PO60384 105 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 IGLV6-57P01721 117 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 CMC4P56277 68 aaPredicted RBP2.44□□□□□ -2.02
CTR9-205ENST00000529898 Q8N9W7 124 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 ST20-AS1Q8NBB2 130 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 DEFB124Q8NES8 71 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 C7orf33Q8WU49 177 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 TP53AIP1Q9HCN2 124 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 CEP295Q9C0D2 2601 aa2.44□□□□□ -2.02
CTR9-205ENST00000529898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms