RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 S100A2P29034 98 aa8.34□□□□□ -1.07
CAPN1-216ENST00000528739 HINT1P49773 126 aaPredicted RBP8.34□□□□□ -1.07
CAPN1-216ENST00000528739 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
CAPN1-216ENST00000528739 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-216ENST00000528739 TIMM17BO60830 172 aa8.33□□□□□ -1.08
CAPN1-216ENST00000528739 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
CAPN1-216ENST00000528739 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-216ENST00000528739 CBY1Q9Y3M2 126 aa8.33□□□□□ -1.08
CAPN1-216ENST00000528739 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
CAPN1-216ENST00000528739 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
CAPN1-216ENST00000528739 ZNF73O43830 326 aaPredicted RBP8.31□□□□□ -1.08
CAPN1-216ENST00000528739 S100A6P06703 90 aa8.31□□□□□ -1.08
CAPN1-216ENST00000528739 AKR1D1P51857 326 aa8.31□□□□□ -1.08
CAPN1-216ENST00000528739 Q6ZRX8 168 aa8.31□□□□□ -1.08
CAPN1-216ENST00000528739 LITAFQ99732 161 aa8.31□□□□□ -1.08
CAPN1-216ENST00000528739 IGLV9-49A0A0B4J1Y8 123 aa8.3□□□□□ -1.08
CAPN1-216ENST00000528739 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
CAPN1-216ENST00000528739 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
CAPN1-216ENST00000528739 LPAP08519 4548 aa8.29□□□□□ -1.08
CAPN1-216ENST00000528739 Q9BRP9 147 aa8.29□□□□□ -1.08
CAPN1-216ENST00000528739 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
CAPN1-216ENST00000528739 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
CAPN1-216ENST00000528739 Q8NBF4 154 aa8.28□□□□□ -1.08
CAPN1-216ENST00000528739 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
CAPN1-216ENST00000528739 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
CAPN1-216ENST00000528739 MOBPQ13875 183 aa8.26□□□□□ -1.09
CAPN1-216ENST00000528739 HIST3H2BBQ8N257 126 aa8.26□□□□□ -1.09
CAPN1-216ENST00000528739 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
CAPN1-216ENST00000528739 LINC00483Q53H64 154 aa8.25□□□□□ -1.09
CAPN1-216ENST00000528739 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
CAPN1-216ENST00000528739 HIST1H2BLQ99880 126 aa8.25□□□□□ -1.09
CAPN1-216ENST00000528739 A6NDN8 102 aa8.24□□□□□ -1.09
CAPN1-216ENST00000528739 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
CAPN1-216ENST00000528739 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
CAPN1-216ENST00000528739 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
CAPN1-216ENST00000528739 IFITM1P13164 125 aa8.23□□□□□ -1.09
CAPN1-216ENST00000528739 MUSTN1Q8IVN3 82 aa8.23□□□□□ -1.09
CAPN1-216ENST00000528739 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
CAPN1-216ENST00000528739 COX7BP24311 80 aa8.22□□□□□ -1.09
CAPN1-216ENST00000528739 CTAG1AP78358 180 aa8.22□□□□□ -1.09
CAPN1-216ENST00000528739 C6orf99Q4VX62 202 aa8.22□□□□□ -1.09
CAPN1-216ENST00000528739 Q6ZVH6 145 aa8.22□□□□□ -1.09
CAPN1-216ENST00000528739 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
CAPN1-216ENST00000528739 DHRS4-AS1Q9P1J3 65 aa8.21□□□□□ -1.1
CAPN1-216ENST00000528739 SCGB1D1O95968 90 aa8.2□□□□□ -1.1
CAPN1-216ENST00000528739 SPINK1P00995 79 aa8.2□□□□□ -1.1
CAPN1-216ENST00000528739 CDIP1Q9H305 208 aa8.2□□□□□ -1.1
CAPN1-216ENST00000528739 RNF213Q63HN8 5207 aa8.19□□□□□ -1.1
CAPN1-216ENST00000528739 DEFB105AQ8NG35 78 aa8.19□□□□□ -1.1
CAPN1-216ENST00000528739 TAL2Q16559 108 aa8.18□□□□□ -1.1
CAPN1-216ENST00000528739 C5orf52A6NGY3 159 aa8.17□□□□□ -1.1
CAPN1-216ENST00000528739 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
CAPN1-216ENST00000528739 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
CAPN1-216ENST00000528739 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
CAPN1-216ENST00000528739 LAMTOR3Q9UHA4 124 aa8.16□□□□□ -1.1
CAPN1-216ENST00000528739 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
CAPN1-216ENST00000528739 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
CAPN1-216ENST00000528739 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
CAPN1-216ENST00000528739 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
CAPN1-216ENST00000528739 Q1RN00 199 aa8.12□□□□□ -1.11
CAPN1-216ENST00000528739 TRBV7-6A0A0J9YX20 115 aa8.11□□□□□ -1.11
CAPN1-216ENST00000528739 SMIM11BQ8TCY0 68 aa8.11□□□□□ -1.11
CAPN1-216ENST00000528739 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
CAPN1-216ENST00000528739 SLC25A20O43772 301 aa8.1□□□□□ -1.11
CAPN1-216ENST00000528739 VAMP3Q15836 100 aa8.1□□□□□ -1.11
CAPN1-216ENST00000528739 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
CAPN1-216ENST00000528739 A4D1N5 150 aa8.09□□□□□ -1.11
CAPN1-216ENST00000528739 SPRR1BP22528 89 aa8.09□□□□□ -1.11
CAPN1-216ENST00000528739 NHP2Q9NX24 153 aaKnown RBP8.09□□□□□ -1.11
CAPN1-216ENST00000528739 RPS29P62273 56 aaKnown RBP8.08□□□□□ -1.12
CAPN1-216ENST00000528739 Q8N377 158 aa8.08□□□□□ -1.12
CAPN1-216ENST00000528739 C12orf57Q99622 126 aa8.07□□□□□ -1.12
CAPN1-216ENST00000528739 COX8AP10176 69 aa8.06□□□□□ -1.12
CAPN1-216ENST00000528739 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
CAPN1-216ENST00000528739 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
CAPN1-216ENST00000528739 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
CAPN1-216ENST00000528739 PAM16Q9Y3D7 125 aa8.05□□□□□ -1.12
CAPN1-216ENST00000528739 A0A0U1RQV1 116 aa8.04□□□□□ -1.12
CAPN1-216ENST00000528739 SPATA45Q537H7 98 aa8.04□□□□□ -1.12
CAPN1-216ENST00000528739 H7C2G1 150 aa8.02□□□□□ -1.13
CAPN1-216ENST00000528739 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
CAPN1-216ENST00000528739 VAMP8Q9BV40 100 aa8.02□□□□□ -1.13
CAPN1-216ENST00000528739 hADV29S1A0JD25 119 aa8.01□□□□□ -1.13
CAPN1-216ENST00000528739 F8WEM9 126 aa8.01□□□□□ -1.13
CAPN1-216ENST00000528739 IGLV5-48A0A075B6I7 105 aa8□□□□□ -1.13
CAPN1-216ENST00000528739 DLEU1O43261 78 aa8□□□□□ -1.13
CAPN1-216ENST00000528739 LINC01547P58512 204 aaPredicted RBP8□□□□□ -1.13
CAPN1-216ENST00000528739 LINC00575Q6W349 94 aa8□□□□□ -1.13
CAPN1-216ENST00000528739 SMIM29Q86T20 159 aa8□□□□□ -1.13
CAPN1-216ENST00000528739 RAB37Q96AX2 223 aa8□□□□□ -1.13
CAPN1-216ENST00000528739 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
CAPN1-216ENST00000528739 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
CAPN1-216ENST00000528739 Q6ZQY7 126 aa7.98□□□□□ -1.13
CAPN1-216ENST00000528739 CD164Q04900 197 aa7.97□□□□□ -1.13
CAPN1-216ENST00000528739 MUC2Q02817 5179 aa7.95□□□□□ -1.14
CAPN1-216ENST00000528739 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
CAPN1-216ENST00000528739 CFC1P0CG37 223 aa7.95□□□□□ -1.14
CAPN1-216ENST00000528739 SNCGO76070 127 aa7.94□□□□□ -1.14
CAPN1-216ENST00000528739 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
CAPN1-216ENST00000528739 HIGD1BQ9P298 99 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms