RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 TMEM167BQ9NRX6 74 aa2.33□□□□□ -2.04
PTPN22-207ENST00000528414 H3BSH0 61 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 Q8NBF4 154 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 ABCA13Q86UQ4 5058 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 ITPR3Q14573 2671 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 C2CD3Q4AC94 2353 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 ABCA4P78363 2273 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 UNC13CQ8NB66 2214 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV5-39A0A0G2JS06 123 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 NDPQ00604 133 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 MINOS1Q5TGZ0 78 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 MINOS1-NBL1R4GNA1 71 aa2.32□□□□□ -2.04
PTPN22-207ENST00000528414 H3BUA1 57 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV1-40P01703 118 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 KRTAP15-1Q3LI76 137 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 C9orf163Q8N9P6 203 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 LENEPQ9Y5L5 61 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 PTPRZ1P23471 2315 aaPredicted RBP2.31□□□□□ -2.04
PTPN22-207ENST00000528414 LINC00959A0A1B0GUT2 108 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 PPP1R17O96001 155 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 FXYD4P59646 89 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 UBALD1Q8TB05 177 aa2.31□□□□□ -2.04
PTPN22-207ENST00000528414 SMIM1B2RUZ4 78 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 CAMK2N1Q7Z7J9 78 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 UBL5Q9BZL1 73 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 FLNBO75369 2602 aaKnown RBP2.3□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.3□□□□□ -2.04
PTPN22-207ENST00000528414 IGKV3-7A0A075B6H7 116 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 IGHV1-3A0A0C4DH29 117 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 GAS8-AS1O95177 125 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 GIG44P09565 113 aaPredicted RBP2.3□□□□□ -2.04
PTPN22-207ENST00000528414 P0C879 139 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 Q8N1X5 172 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 LINC00208Q96KT6 92 aa2.3□□□□□ -2.04
PTPN22-207ENST00000528414 EP300Q09472 2414 aaPredicted RBP2.3□□□□□ -2.04
PTPN22-207ENST00000528414 MXRA5Q9NR99 2828 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 CSMD3Q7Z407 3707 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 LAMA5O15230 3695 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 NCR3O14931 201 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 IGLV3-1P01715 115 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 SPRR4Q96PI1 79 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 FREM2Q5SZK8 3169 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 LAMA1P25391 3075 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 RIF1Q5UIP0 2472 aaKnown RBP2.29□□□□□ -2.04
PTPN22-207ENST00000528414 TRBV10-1A0A0K0K1A3 114 aa2.29□□□□□ -2.04
PTPN22-207ENST00000528414 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
PTPN22-207ENST00000528414 HERC1Q15751 4861 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 IGKV3OR2-268A0A0C4DH90 116 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 H3BPC8 53 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 ZNF861PO60384 105 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 SUMO4Q6EEV6 95 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 COX7B2Q8TF08 81 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 TNCP24821 2201 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 NIPBLQ6KC79 2804 aaeCLIP2.28□□□□□ -2.04
PTPN22-207ENST00000528414 MGAQ8IWI9 3026 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 PDE6GP18545 87 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 DOPEY2Q9Y3R5 2298 aa2.28□□□□□ -2.04
PTPN22-207ENST00000528414 INSP01308 110 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 C1orf137Q5JT78 98 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 MRPL36Q9P0J6 103 aaKnown RBP2.27□□□□□ -2.05
PTPN22-207ENST00000528414 ICE1Q9Y2F5 2266 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 TRBV6-1A0A0K0K1D8 114 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 NUPR2A6NF83 97 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 CNTRLQ7Z7A1 2325 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 IGLV11-55A0A075B6I3 123 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 CCL18P55774 89 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 Q6ZTI0 123 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 LINC00612Q8N6U2 182 aa2.27□□□□□ -2.05
PTPN22-207ENST00000528414 H3BQ85 93 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 KRTAP10-11P60412 298 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 Q5W150 140 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 TMEM14AQ9Y6G1 99 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 NAV3Q8IVL0 2385 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 IGLV4-60A0A075B6I1 120 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 A0A087WTM6 91 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 IGHV3-64DA0A0J9YX35 117 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 IGKV2-29A2NJV5 120 aaPredicted RBP2.26□□□□□ -2.05
PTPN22-207ENST00000528414 SPATA8Q6RVD6 105 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 Q86TA4 180 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 CNFNQ9BYD5 112 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 KLK12Q9UKR0 248 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 A0A087WYN8 130 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 SLPIP03973 132 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 IGKV4-1P06312 121 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 R4GMQ9 66 aa2.26□□□□□ -2.05
PTPN22-207ENST00000528414 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
PTPN22-207ENST00000528414 MAPK1IP1LQ8NDC0 245 aa2.25□□□□□ -2.05
PTPN22-207ENST00000528414 CACNA1DQ01668 2161 aa2.25□□□□□ -2.05
PTPN22-207ENST00000528414 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.25□□□□□ -2.05
PTPN22-207ENST00000528414 LOC110117498A0A087WWA1 95 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms