RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 Q6ZRX8 168 aa11.33□□□□□ -0.6
BEST1-203ENST00000524877 ELOF1P60002 83 aaKnown RBP11.32□□□□□ -0.6
BEST1-203ENST00000524877 FAM218AQ96MZ4 157 aa11.31□□□□□ -0.6
BEST1-203ENST00000524877 Q6ZQT0 140 aa11.31□□□□□ -0.6
BEST1-203ENST00000524877 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
BEST1-203ENST00000524877 CR1P17927 2039 aa11.3□□□□□ -0.6
BEST1-203ENST00000524877 TP53AIP1Q9HCN2 124 aa11.3□□□□□ -0.6
BEST1-203ENST00000524877 LOC110117498A0A087WWA1 95 aa11.3□□□□□ -0.6
BEST1-203ENST00000524877 COA5Q86WW8 74 aa11.3□□□□□ -0.6
BEST1-203ENST00000524877 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
BEST1-203ENST00000524877 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
BEST1-203ENST00000524877 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
BEST1-203ENST00000524877 SMR3BP02814 79 aaPredicted RBP11.28□□□□□ -0.6
BEST1-203ENST00000524877 UQCR11O14957 56 aa11.27□□□□□ -0.6
BEST1-203ENST00000524877 HELZ2Q9BYK8 2649 aaKnown RBP11.27□□□□□ -0.61
BEST1-203ENST00000524877 CDC42SE1Q9NRR8 79 aa11.26□□□□□ -0.61
BEST1-203ENST00000524877 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
BEST1-203ENST00000524877 A0A1B0GW54 56 aa11.25□□□□□ -0.61
BEST1-203ENST00000524877 LINC01554Q52M75 96 aa11.25□□□□□ -0.61
BEST1-203ENST00000524877 TRANK1O15050 2925 aa11.23□□□□□ -0.61
BEST1-203ENST00000524877 Q5XG85 94 aa11.22□□□□□ -0.61
BEST1-203ENST00000524877 MIR22HGQ0VDD5 57 aa11.21□□□□□ -0.61
BEST1-203ENST00000524877 C5orf42Q9H799 3197 aa11.21□□□□□ -0.62
BEST1-203ENST00000524877 IGLV1-50A0A075B6I6 118 aa11.2□□□□□ -0.62
BEST1-203ENST00000524877 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
BEST1-203ENST00000524877 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
BEST1-203ENST00000524877 CNBPP62633 177 aaKnown RBP11.19□□□□□ -0.62
BEST1-203ENST00000524877 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
BEST1-203ENST00000524877 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
BEST1-203ENST00000524877 ZNF861PO60384 105 aa11.17□□□□□ -0.62
BEST1-203ENST00000524877 Q1T7F1 81 aa11.16□□□□□ -0.62
BEST1-203ENST00000524877 ST20-AS1Q8NBB2 130 aa11.16□□□□□ -0.62
BEST1-203ENST00000524877 LINC00304Q8N9R0 145 aa11.16□□□□□ -0.62
BEST1-203ENST00000524877 TNP2Q05952 138 aa11.16□□□□□ -0.62
BEST1-203ENST00000524877 MUC4Q99102 2169 aa11.15□□□□□ -0.62
BEST1-203ENST00000524877 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
BEST1-203ENST00000524877 IGLV6-57P01721 117 aa11.14□□□□□ -0.63
BEST1-203ENST00000524877 PLA2G2DQ9UNK4 145 aa11.13□□□□□ -0.63
BEST1-203ENST00000524877 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
BEST1-203ENST00000524877 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
BEST1-203ENST00000524877 CRIPTQ9P021 101 aa11.11□□□□□ -0.63
BEST1-203ENST00000524877 LINC00313P59037 77 aa11.11□□□□□ -0.63
BEST1-203ENST00000524877 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
BEST1-203ENST00000524877 FLNAP21333 2647 aaKnown RBP11.09□□□□□ -0.63
BEST1-203ENST00000524877 ZNF292O60281 2723 aa11.08□□□□□ -0.64
BEST1-203ENST00000524877 ITPR3Q14573 2671 aa11.07□□□□□ -0.64
BEST1-203ENST00000524877 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
BEST1-203ENST00000524877 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
BEST1-203ENST00000524877 RANBP2P49792 3224 aaKnown RBP11.06□□□□□ -0.64
BEST1-203ENST00000524877 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
BEST1-203ENST00000524877 LCE6AA0A183 80 aa11.05□□□□□ -0.64
BEST1-203ENST00000524877 PCNTO95613 3336 aa11.05□□□□□ -0.64
BEST1-203ENST00000524877 Q96NJ1 140 aa11.05□□□□□ -0.64
BEST1-203ENST00000524877 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
BEST1-203ENST00000524877 A0A1W2PNN7 141 aa11.03□□□□□ -0.64
BEST1-203ENST00000524877 TRBV7-4A0A0J9YYF1 115 aa11.01□□□□□ -0.65
BEST1-203ENST00000524877 LITAFQ99732 161 aa11.01□□□□□ -0.65
BEST1-203ENST00000524877 CFAP46Q8IYW2 2715 aa10.98□□□□□ -0.65
BEST1-203ENST00000524877 COX6B2Q6YFQ2 88 aa10.97□□□□□ -0.65
BEST1-203ENST00000524877 FP248Q71RG6 208 aaPredicted RBP10.95□□□□□ -0.66
BEST1-203ENST00000524877 K7EQZ3 153 aa10.94□□□□□ -0.66
BEST1-203ENST00000524877 SPANXA2-OT1Q8N9U9 137 aa10.94□□□□□ -0.66
BEST1-203ENST00000524877 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
BEST1-203ENST00000524877 Q75L30 129 aa10.93□□□□□ -0.66
BEST1-203ENST00000524877 PRAC1Q96KF2 57 aa10.92□□□□□ -0.66
BEST1-203ENST00000524877 LUZP6Q538Z0 58 aa10.92□□□□□ -0.66
BEST1-203ENST00000524877 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
BEST1-203ENST00000524877 A8MWP4 228 aa10.9□□□□□ -0.66
BEST1-203ENST00000524877 IGLV5-37A0A075B6J1 123 aa10.9□□□□□ -0.66
BEST1-203ENST00000524877 SPRR4Q96PI1 79 aa10.9□□□□□ -0.66
BEST1-203ENST00000524877 A0A0A0MQY5 61 aa10.88□□□□□ -0.67
BEST1-203ENST00000524877 ANAPC11Q9NYG5 84 aa10.87□□□□□ -0.67
BEST1-203ENST00000524877 C9orf92A6NGG3 77 aa10.87□□□□□ -0.67
BEST1-203ENST00000524877 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
BEST1-203ENST00000524877 BAHCC1Q9P281 2608 aa10.86□□□□□ -0.67
BEST1-203ENST00000524877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
BEST1-203ENST00000524877 AKAP13Q12802 2813 aa10.85□□□□□ -0.67
BEST1-203ENST00000524877 FAM229BQ4G0N7 80 aa10.83□□□□□ -0.68
BEST1-203ENST00000524877 PRRC2CQ9Y520 2896 aaKnown RBP10.82□□□□□ -0.68
BEST1-203ENST00000524877 PLAC8Q9NZF1 115 aa10.8□□□□□ -0.68
BEST1-203ENST00000524877 DSCR10P59022 87 aa10.8□□□□□ -0.68
BEST1-203ENST00000524877 OBSCN-AS1Q96MR7 158 aa10.8□□□□□ -0.68
BEST1-203ENST00000524877 MGAM2Q2M2H8 2515 aa10.78□□□□□ -0.68
BEST1-203ENST00000524877 Q8N377 158 aa10.78□□□□□ -0.68
BEST1-203ENST00000524877 MRPL34Q9BQ48 92 aaKnown RBP10.78□□□□□ -0.68
BEST1-203ENST00000524877 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
BEST1-203ENST00000524877 CYSTM1Q9H1C7 97 aa10.76□□□□□ -0.69
BEST1-203ENST00000524877 CSAG1Q6PB30 78 aa10.75□□□□□ -0.69
BEST1-203ENST00000524877 Q5VSD8 79 aa10.75□□□□□ -0.69
BEST1-203ENST00000524877 OXTP01178 125 aa10.74□□□□□ -0.69
BEST1-203ENST00000524877 MAST4O15021 2626 aa10.73□□□□□ -0.69
BEST1-203ENST00000524877 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
BEST1-203ENST00000524877 Q5VV11 94 aa10.72□□□□□ -0.69
BEST1-203ENST00000524877 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
BEST1-203ENST00000524877 BRCA2P51587 3418 aa10.72□□□□□ -0.69
BEST1-203ENST00000524877 A0A1B0GVX0 72 aa10.71□□□□□ -0.69
BEST1-203ENST00000524877 EIF4EBP3O60516 100 aaPredicted RBP10.71□□□□□ -0.69
BEST1-203ENST00000524877 ATRQ13535 2644 aa10.71□□□□□ -0.69
BEST1-203ENST00000524877 KRTAP16-1A8MUX0 517 aa10.71□□□□□ -0.7
BEST1-203ENST00000524877 OCR1Q9BZK8 76 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms