RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TRBV6-4A0A1B0GX49 114 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 PRB2P02812 416 aaPredicted RBP4.07□□□□□ -1.76
SDC2-208ENST00000523877 SLPIP03973 132 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 DEFB124Q8NES8 71 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 C4orf3Q8WVX3 66 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 CACNA1CQ13936 2221 aa4.07□□□□□ -1.76
SDC2-208ENST00000523877 KLK12Q9UKR0 248 aa4.06□□□□□ -1.76
SDC2-208ENST00000523877 NOTCH2Q04721 2471 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 APC2O95996 2303 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 ATMQ13315 3056 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 A0A1B0GU33 70 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 A0A1W2PNU3 283 aaPredicted RBP4.05□□□□□ -1.76
SDC2-208ENST00000523877 LINC00158P58513 81 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 KRTAP1-1Q07627 177 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 IGFL4Q6B9Z1 124 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 SPINK14Q6IE38 97 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
SDC2-208ENST00000523877 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 NF1P21359 2839 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 COL6A6A6NMZ7 2263 aa4.05□□□□□ -1.76
SDC2-208ENST00000523877 A0A1B0GU69 56 aa4.04□□□□□ -1.76
SDC2-208ENST00000523877 RPL39P62891 51 aaKnown RBP4.04□□□□□ -1.76
SDC2-208ENST00000523877 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
SDC2-208ENST00000523877 ACACAQ13085 2346 aa4.04□□□□□ -1.76
SDC2-208ENST00000523877 ALPK2Q86TB3 2170 aa4.03□□□□□ -1.76
SDC2-208ENST00000523877 TRGV1A0A0A0MS02 117 aa4.03□□□□□ -1.76
SDC2-208ENST00000523877 H3BRN7 92 aa4.03□□□□□ -1.76
SDC2-208ENST00000523877 CREBBPQ92793 2442 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 CD52P31358 61 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 MRGPRG-AS1Q2M3A8 158 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 LINC00612Q8N6U2 182 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 ST20-AS1Q8NBB2 130 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 RNF5Q99942 180 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 ABCA2Q9BZC7 2435 aa4.02□□□□□ -1.77
SDC2-208ENST00000523877 SPAG17Q6Q759 2223 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 OTOGQ6ZRI0 2925 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 DEFB131BA0A096LNP1 70 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 Q6ZQY7 126 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 LRRK2Q5S007 2527 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 PTPRQQ9UMZ3 2332 aa4.01□□□□□ -1.77
SDC2-208ENST00000523877 Q8N1X5 172 aa4□□□□□ -1.77
SDC2-208ENST00000523877 PATE1Q8WXA2 126 aa4□□□□□ -1.77
SDC2-208ENST00000523877 USP9YO00507 2555 aaPredicted RBP4□□□□□ -1.77
SDC2-208ENST00000523877 A0A087WTM6 91 aa3.99□□□□□ -1.77
SDC2-208ENST00000523877 DOPEY2Q9Y3R5 2298 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 KNTC1P50748 2209 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 SDK1Q7Z5N4 2213 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 ASXL3Q9C0F0 2248 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 FLNCQ14315 2725 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 IGKV2-40A0A087WW87 121 aaPredicted RBP3.98□□□□□ -1.77
SDC2-208ENST00000523877 IGKV2D-40P01614 121 aaPredicted RBP3.98□□□□□ -1.77
SDC2-208ENST00000523877 PROK1P58294 105 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 PRB3Q04118 309 aaPredicted RBP3.98□□□□□ -1.77
SDC2-208ENST00000523877 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 Q8N377 158 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 URB1O60287 2271 aaKnown RBP3.98□□□□□ -1.77
SDC2-208ENST00000523877 CSMD1Q96PZ7 3565 aa3.98□□□□□ -1.77
SDC2-208ENST00000523877 MGAQ8IWI9 3026 aa3.97□□□□□ -1.77
SDC2-208ENST00000523877 LRBAP50851 2863 aa3.97□□□□□ -1.77
SDC2-208ENST00000523877 Q8N9L7 120 aa3.97□□□□□ -1.77
SDC2-208ENST00000523877 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
SDC2-208ENST00000523877 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
SDC2-208ENST00000523877 PCNX1Q96RV3 2341 aa3.96□□□□□ -1.77
SDC2-208ENST00000523877 POLQO75417 2590 aa3.96□□□□□ -1.78
SDC2-208ENST00000523877 M0R2N4 97 aa3.96□□□□□ -1.78
SDC2-208ENST00000523877 Q8IZM0 81 aa3.96□□□□□ -1.78
SDC2-208ENST00000523877 ITPR2Q14571 2701 aa3.96□□□□□ -1.78
SDC2-208ENST00000523877 SETD2Q9BYW2 2564 aaPredicted RBP3.95□□□□□ -1.78
SDC2-208ENST00000523877 CACNA1EQ15878 2313 aa3.95□□□□□ -1.78
SDC2-208ENST00000523877 BSNQ9UPA5 3926 aa3.95□□□□□ -1.78
SDC2-208ENST00000523877 SEC16AO15027 2179 aa3.95□□□□□ -1.78
SDC2-208ENST00000523877 ADGRG4Q8IZF6 3080 aa3.94□□□□□ -1.78
SDC2-208ENST00000523877 DEFB116Q30KQ4 102 aa3.94□□□□□ -1.78
SDC2-208ENST00000523877 TMEM167AQ8TBQ9 72 aa3.94□□□□□ -1.78
SDC2-208ENST00000523877 LEAP2Q969E1 77 aa3.94□□□□□ -1.78
SDC2-208ENST00000523877 ASCC3Q8N3C0 2202 aaKnown RBP3.94□□□□□ -1.78
SDC2-208ENST00000523877 UNC13CQ8NB66 2214 aa3.94□□□□□ -1.78
SDC2-208ENST00000523877 ABCA4P78363 2273 aa3.93□□□□□ -1.78
SDC2-208ENST00000523877 PDZD2O15018 2839 aa3.93□□□□□ -1.78
SDC2-208ENST00000523877 BOD1L1Q8NFC6 3051 aa3.93□□□□□ -1.78
SDC2-208ENST00000523877 IGKV2D-24A0A075B6R9 120 aa3.93□□□□□ -1.78
SDC2-208ENST00000523877 GIG44P09565 113 aaPredicted RBP3.93□□□□□ -1.78
SDC2-208ENST00000523877 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
SDC2-208ENST00000523877 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
SDC2-208ENST00000523877 TLN1Q9Y490 2541 aaKnown RBP3.93□□□□□ -1.78
SDC2-208ENST00000523877 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
SDC2-208ENST00000523877 NBDYA0A0U1RRE5 68 aa3.92□□□□□ -1.78
SDC2-208ENST00000523877 F5P12259 2224 aa3.92□□□□□ -1.78
SDC2-208ENST00000523877 F8P00451 2351 aa3.92□□□□□ -1.78
SDC2-208ENST00000523877 AHCTF1Q8WYP5 2266 aa3.91□□□□□ -1.78
SDC2-208ENST00000523877 A0A0J9YWU9 116 aa3.91□□□□□ -1.78
SDC2-208ENST00000523877 LINC00315P59091 139 aa3.91□□□□□ -1.78
SDC2-208ENST00000523877 HRES1P13985 223 aa3.9□□□□□ -1.79
SDC2-208ENST00000523877 Q96NJ1 140 aa3.9□□□□□ -1.79
SDC2-208ENST00000523877 NAV3Q8IVL0 2385 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms