RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 GCN1Q92616 2671 aaKnown RBP-1.79□□□□□ -2.7
NPM1-206ENST00000519955 ANKRD36A6QL64 1941 aa-1.79□□□□□ -2.7
NPM1-206ENST00000519955 CEP290O15078 2479 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 NCOA3Q9Y6Q9 1424 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 TRAV30A0A087WSZ9 112 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 SPTY2D1-AS1A0A0U1RR47 76 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 C20orf202A1L168 122 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 MPC2O95563 127 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 HEPN1Q6WQI6 88 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 TRGV9Q99603 122 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 PTPN23Q9H3S7 1636 aa-1.8□□□□□ -2.7
NPM1-206ENST00000519955 UQCRHP07919 91 aa-1.81□□□□□ -2.7
NPM1-206ENST00000519955 CDKN2A-AS1Q9UH64 79 aa-1.81□□□□□ -2.7
NPM1-206ENST00000519955 ADAMTS12P58397 1594 aa-1.81□□□□□ -2.7
NPM1-206ENST00000519955 TRIOO75962 3097 aa-1.82□□□□□ -2.7
NPM1-206ENST00000519955 CLIP1P30622 1438 aa-1.82□□□□□ -2.7
NPM1-206ENST00000519955 H7BZZ5 65 aa-1.82□□□□□ -2.7
NPM1-206ENST00000519955 CEP295Q9C0D2 2601 aa-1.82□□□□□ -2.7
NPM1-206ENST00000519955 PRDM15P57071 1507 aaPredicted RBP-1.82□□□□□ -2.7
NPM1-206ENST00000519955 TROQ12816 1431 aaPredicted RBP-1.83□□□□□ -2.7
NPM1-206ENST00000519955 TRBV7-7A0A0K0K1E9 115 aa-1.83□□□□□ -2.7
NPM1-206ENST00000519955 CUX1P39880 1505 aa-1.83□□□□□ -2.7
NPM1-206ENST00000519955 ABCA13Q86UQ4 5058 aa-1.84□□□□□ -2.7
NPM1-206ENST00000519955 ABCC2Q92887 1545 aa-1.84□□□□□ -2.7
NPM1-206ENST00000519955 H3BNG1 76 aa-1.84□□□□□ -2.7
NPM1-206ENST00000519955 CHD7Q9P2D1 2997 aa-1.84□□□□□ -2.7
NPM1-206ENST00000519955 NBEAL2Q6ZNJ1 2754 aa-1.85□□□□□ -2.71
NPM1-206ENST00000519955 ZFYVE16Q7Z3T8 1539 aa-1.85□□□□□ -2.71
NPM1-206ENST00000519955 LELP1Q5T871 98 aa-1.85□□□□□ -2.71
NPM1-206ENST00000519955 MON2Q7Z3U7 1717 aa-1.86□□□□□ -2.71
NPM1-206ENST00000519955 HIGD1BQ9P298 99 aa-1.86□□□□□ -2.71
NPM1-206ENST00000519955 COL14A1Q05707 1796 aaKnown RBP-1.86□□□□□ -2.71
NPM1-206ENST00000519955 SAMD9Q5K651 1589 aa-1.86□□□□□ -2.71
NPM1-206ENST00000519955 C5orf42Q9H799 3197 aa-1.86□□□□□ -2.71
NPM1-206ENST00000519955 RAPGEF2Q9Y4G8 1499 aa-1.87□□□□□ -2.71
NPM1-206ENST00000519955 WFDC13Q8IUB5 93 aa-1.87□□□□□ -2.71
NPM1-206ENST00000519955 PDE4DIPQ5VU43 2346 aa-1.88□□□□□ -2.71
NPM1-206ENST00000519955 C9orf92A6NGG3 77 aa-1.88□□□□□ -2.71
NPM1-206ENST00000519955 C5P01031 1676 aa-1.88□□□□□ -2.71
NPM1-206ENST00000519955 PMCHL2Q9BQD1 86 aa-1.89□□□□□ -2.71
NPM1-206ENST00000519955 AP4S1Q9Y587 144 aa-1.9□□□□□ -2.71
NPM1-206ENST00000519955 CSMD1Q96PZ7 3565 aa-1.91□□□□□ -2.71
NPM1-206ENST00000519955 COL6A5A8TX70 2615 aa-1.91□□□□□ -2.72
NPM1-206ENST00000519955 ATOX1O00244 68 aa-1.91□□□□□ -2.72
NPM1-206ENST00000519955 HMGN3Q15651 99 aa-1.91□□□□□ -2.72
NPM1-206ENST00000519955 SERP2Q8N6R1 65 aa-1.92□□□□□ -2.72
NPM1-206ENST00000519955 PSENENQ9NZ42 101 aa-1.92□□□□□ -2.72
NPM1-206ENST00000519955 SRCAPQ6ZRS2 3230 aa-1.93□□□□□ -2.72
NPM1-206ENST00000519955 ANKRD36BQ8N2N9 1353 aa-1.93□□□□□ -2.72
NPM1-206ENST00000519955 ALKAL2Q6UX46 152 aa-1.93□□□□□ -2.72
NPM1-206ENST00000519955 ACACBO00763 2458 aa-1.93□□□□□ -2.72
NPM1-206ENST00000519955 NRXN1Q9ULB1 1477 aa-1.94□□□□□ -2.72
NPM1-206ENST00000519955 RANBP2P49792 3224 aaKnown RBP-1.94□□□□□ -2.72
NPM1-206ENST00000519955 BCORQ6W2J9 1755 aa-1.94□□□□□ -2.72
NPM1-206ENST00000519955 MT-ATP8P03928 68 aa-1.94□□□□□ -2.72
NPM1-206ENST00000519955 H0YAA0 97 aa-1.95□□□□□ -2.72
NPM1-206ENST00000519955 K7EP34 96 aa-1.95□□□□□ -2.72
NPM1-206ENST00000519955 ANKRD50Q9ULJ7 1429 aa-1.95□□□□□ -2.72
NPM1-206ENST00000519955 CFAP46Q8IYW2 2715 aa-1.95□□□□□ -2.72
NPM1-206ENST00000519955 DNAH17Q9UFH2 4485 aa-1.96□□□□□ -2.72
NPM1-206ENST00000519955 TMEM218A2RU14 115 aa-1.96□□□□□ -2.72
NPM1-206ENST00000519955 MT1XP80297 61 aa-1.96□□□□□ -2.72
NPM1-206ENST00000519955 KIF20BQ96Q89 1820 aa-1.96□□□□□ -2.72
NPM1-206ENST00000519955 CICQ96RK0 1608 aaPredicted RBP-1.97□□□□□ -2.72
NPM1-206ENST00000519955 IGLC2P0DOY2 106 aa-1.97□□□□□ -2.72
NPM1-206ENST00000519955 IGLC3P0DOY3 106 aa-1.97□□□□□ -2.72
NPM1-206ENST00000519955 DEFB1P60022 68 aa-1.97□□□□□ -2.72
NPM1-206ENST00000519955 ETDBQ3ZM63 59 aa-1.97□□□□□ -2.72
NPM1-206ENST00000519955 EYSQ5T1H1 3165 aa-1.97□□□□□ -2.73
NPM1-206ENST00000519955 LRBAP50851 2863 aa-1.97□□□□□ -2.73
NPM1-206ENST00000519955 DNAH5Q8TE73 4624 aa-1.97□□□□□ -2.73
NPM1-206ENST00000519955 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.98□□□□□ -2.73
NPM1-206ENST00000519955 MYO9AB2RTY4 2548 aa-1.98□□□□□ -2.73
NPM1-206ENST00000519955 D6R8Y8 96 aa-1.98□□□□□ -2.73
NPM1-206ENST00000519955 MUSTN1Q8IVN3 82 aa-1.98□□□□□ -2.73
NPM1-206ENST00000519955 SMG1Q96Q15 3661 aaKnown RBP-1.98□□□□□ -2.73
NPM1-206ENST00000519955 MT1HL1P0DM35 61 aa-1.99□□□□□ -2.73
NPM1-206ENST00000519955 ZNF720Q7Z2F6 126 aa-1.99□□□□□ -2.73
NPM1-206ENST00000519955 LEPROTL1O95214 131 aa-2□□□□□ -2.73
NPM1-206ENST00000519955 KRTAP19-5Q3LI72 72 aa-2□□□□□ -2.73
NPM1-206ENST00000519955 NMSQ5H8A3 153 aa-2□□□□□ -2.73
NPM1-206ENST00000519955 S100A10P60903 97 aa-2.01□□□□□ -2.73
NPM1-206ENST00000519955 S100PP25815 95 aa-2.02□□□□□ -2.73
NPM1-206ENST00000519955 FYCO1Q9BQS8 1478 aa-2.02□□□□□ -2.73
NPM1-206ENST00000519955 BPTFQ12830 3046 aa-2.02□□□□□ -2.73
NPM1-206ENST00000519955 TLN2Q9Y4G6 2542 aa-2.02□□□□□ -2.73
NPM1-206ENST00000519955 RGPD2P0DJD1 1756 aa-2.03□□□□□ -2.73
NPM1-206ENST00000519955 LINC00032P0C843 101 aa-2.03□□□□□ -2.73
NPM1-206ENST00000519955 TRRAPQ9Y4A5 3859 aa-2.04□□□□□ -2.74
NPM1-206ENST00000519955 UQCRHLA0A096LP55 91 aa-2.04□□□□□ -2.74
NPM1-206ENST00000519955 F8WEM9 126 aa-2.04□□□□□ -2.74
NPM1-206ENST00000519955 COL5A1-AS1Q5SY13 56 aa-2.04□□□□□ -2.74
NPM1-206ENST00000519955 CRYBG1Q9Y4K1 1723 aa-2.04□□□□□ -2.74
NPM1-206ENST00000519955 MAGI2Q86UL8 1455 aa-2.05□□□□□ -2.74
NPM1-206ENST00000519955 DNAH10Q8IVF4 4471 aa-2.05□□□□□ -2.74
NPM1-206ENST00000519955 C14orf144Q96I85 54 aa-2.06□□□□□ -2.74
NPM1-206ENST00000519955 TEX14Q8IWB6 1497 aa-2.07□□□□□ -2.74
NPM1-206ENST00000519955 COX6B2Q6YFQ2 88 aa-2.07□□□□□ -2.74
NPM1-206ENST00000519955 TCEAL7Q9BRU2 100 aa-2.07□□□□□ -2.74
NPM1-206ENST00000519955 MAP3K1Q13233 1512 aa-2.07□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms