RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 ABCA1O95477 2261 aa1.31□□□□□ -2.2
PABPC1-211ENST00000519596 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
PABPC1-211ENST00000519596 CADP27708 2225 aa1.3□□□□□ -2.2
PABPC1-211ENST00000519596 UBE2DNLQ8IWF7 75 aa1.3□□□□□ -2.2
PABPC1-211ENST00000519596 KNTC1P50748 2209 aa1.3□□□□□ -2.2
PABPC1-211ENST00000519596 LYNX1G3V0Z9 82 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 PRB1P04280 392 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
PABPC1-211ENST00000519596 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 ARHGAP5-AS1Q96IT6 56 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 USMG5Q96IX5 58 aa1.29□□□□□ -2.2
PABPC1-211ENST00000519596 K7EQZ3 153 aa1.28□□□□□ -2.2
PABPC1-211ENST00000519596 TP53AIP1Q9HCN2 124 aa1.28□□□□□ -2.2
PABPC1-211ENST00000519596 CCL22O00626 93 aa1.27□□□□□ -2.21
PABPC1-211ENST00000519596 MINOS1Q5TGZ0 78 aa1.26□□□□□ -2.21
PABPC1-211ENST00000519596 RPS27LQ71UM5 84 aaKnown RBP1.26□□□□□ -2.21
PABPC1-211ENST00000519596 MRPL34Q9BQ48 92 aaKnown RBP1.26□□□□□ -2.21
PABPC1-211ENST00000519596 PRO3102Q9H379 93 aa1.26□□□□□ -2.21
PABPC1-211ENST00000519596 BPTFQ12830 3046 aa1.25□□□□□ -2.21
PABPC1-211ENST00000519596 SPRR5A0A1B0GTR4 108 aa1.25□□□□□ -2.21
PABPC1-211ENST00000519596 LOC730098B7Z3J9 87 aa1.25□□□□□ -2.21
PABPC1-211ENST00000519596 PIGYQ3MUY2 71 aa1.25□□□□□ -2.21
PABPC1-211ENST00000519596 ICE1Q9Y2F5 2266 aa1.25□□□□□ -2.21
PABPC1-211ENST00000519596 AHCTF1Q8WYP5 2266 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 ASCC3Q8N3C0 2202 aaKnown RBP1.24□□□□□ -2.21
PABPC1-211ENST00000519596 SORL1Q92673 2214 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 ASXL3Q9C0F0 2248 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 PRB3Q04118 309 aaPredicted RBP1.24□□□□□ -2.21
PABPC1-211ENST00000519596 LINC01590Q5TEZ4 76 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 TTTY10Q9BZA0 68 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 HIVEP2P31629 2446 aa1.24□□□□□ -2.21
PABPC1-211ENST00000519596 ANKRD17O75179 2603 aaKnown RBP1.23□□□□□ -2.21
PABPC1-211ENST00000519596 I3L2K1 104 aa1.23□□□□□ -2.21
PABPC1-211ENST00000519596 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
PABPC1-211ENST00000519596 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
PABPC1-211ENST00000519596 DEFB123Q8N688 67 aa1.23□□□□□ -2.21
PABPC1-211ENST00000519596 CNOT1A5YKK6 2376 aaKnown RBP1.22□□□□□ -2.21
PABPC1-211ENST00000519596 LYNX1P0DP58 116 aa1.22□□□□□ -2.21
PABPC1-211ENST00000519596 DEFB103AP81534 67 aa1.22□□□□□ -2.21
PABPC1-211ENST00000519596 CACNA1EQ15878 2313 aa1.21□□□□□ -2.22
PABPC1-211ENST00000519596 PCOTHQ58A44 107 aa1.21□□□□□ -2.22
PABPC1-211ENST00000519596 H0YAA0 97 aa1.2□□□□□ -2.22
PABPC1-211ENST00000519596 BRD3OSQ6XYD6 125 aa1.2□□□□□ -2.22
PABPC1-211ENST00000519596 IGLV5-48A0A075B6I7 105 aa1.19□□□□□ -2.22
PABPC1-211ENST00000519596 RPL39P62891 51 aaKnown RBP1.19□□□□□ -2.22
PABPC1-211ENST00000519596 WFDC13Q8IUB5 93 aa1.19□□□□□ -2.22
PABPC1-211ENST00000519596 ALMS1Q8TCU4 4167 aa1.19□□□□□ -2.22
PABPC1-211ENST00000519596 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.18□□□□□ -2.221e-7■■■□□ 16.4
PABPC1-211ENST00000519596 DOPEY2Q9Y3R5 2298 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 K7EIL1 84 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 DEFB131AP59861 70 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 COX6A2Q02221 97 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 Q6ZSA8 131 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 WFDC10BQ8IUB3 73 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 RPL39LQ96EH5 51 aaKnown RBP1.18□□□□□ -2.22
PABPC1-211ENST00000519596 PDE4DIPQ5VU43 2346 aa1.18□□□□□ -2.22
PABPC1-211ENST00000519596 RPS27P42677 84 aaKnown RBP1.17□□□□□ -2.22
PABPC1-211ENST00000519596 PRCDQ00LT1 54 aa1.17□□□□□ -2.22
PABPC1-211ENST00000519596 H1FX-AS1Q4G0G2 97 aa1.17□□□□□ -2.22
PABPC1-211ENST00000519596 PTPRQQ9UMZ3 2332 aa1.17□□□□□ -2.22
PABPC1-211ENST00000519596 CACNA1BQ00975 2339 aa1.16□□□□□ -2.22
PABPC1-211ENST00000519596 COL6A6A6NMZ7 2263 aa1.16□□□□□ -2.22
PABPC1-211ENST00000519596 H3BSH0 61 aa1.16□□□□□ -2.22
PABPC1-211ENST00000519596 NAV3Q8IVL0 2385 aa1.16□□□□□ -2.22
PABPC1-211ENST00000519596 H3BUA1 57 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 KRTAP4-1Q9BYQ7 146 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 C10orf95Q9H7T3 257 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 CACNA1GO43497 2377 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 FAM208BQ5VWN6 2430 aa1.15□□□□□ -2.23
PABPC1-211ENST00000519596 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 Q5VSD8 79 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 DEFB119Q8N690 84 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 KAAG1Q9UBP8 84 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 CRCT1Q9UGL9 99 aa1.14□□□□□ -2.23
PABPC1-211ENST00000519596 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
PABPC1-211ENST00000519596 MMP24-AS1A0A0U1RRL7 71 aa1.13□□□□□ -2.23
PABPC1-211ENST00000519596 WT1-ASQ06250 92 aa1.13□□□□□ -2.23
PABPC1-211ENST00000519596 SPINK9Q5DT21 86 aa1.13□□□□□ -2.23
PABPC1-211ENST00000519596 OTOGLQ3ZCN5 2332 aa1.13□□□□□ -2.23
PABPC1-211ENST00000519596 ZDBF2Q9HCK1 2354 aa1.13□□□□□ -2.23
PABPC1-211ENST00000519596 KNL1Q8NG31 2342 aa1.12□□□□□ -2.23
PABPC1-211ENST00000519596 M0QY20 66 aa1.12□□□□□ -2.23
PABPC1-211ENST00000519596 SPRR1AP35321 89 aa1.12□□□□□ -2.23
PABPC1-211ENST00000519596 LELP1Q5T871 98 aa1.12□□□□□ -2.23
PABPC1-211ENST00000519596 APLNQ9ULZ1 77 aa1.12□□□□□ -2.23
PABPC1-211ENST00000519596 DEFB109BQ30KR1 87 aa1.11□□□□□ -2.23
PABPC1-211ENST00000519596 DEFB105AQ8NG35 78 aa1.11□□□□□ -2.23
PABPC1-211ENST00000519596 LEAP2Q969E1 77 aa1.11□□□□□ -2.23
PABPC1-211ENST00000519596 WNK2Q9Y3S1 2297 aa1.1□□□□□ -2.23
PABPC1-211ENST00000519596 CNTRLQ7Z7A1 2325 aa1.1□□□□□ -2.23
PABPC1-211ENST00000519596 BAHCC1Q9P281 2608 aa1.1□□□□□ -2.23
PABPC1-211ENST00000519596 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
PABPC1-211ENST00000519596 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.23
PABPC1-211ENST00000519596 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
PABPC1-211ENST00000519596 JMJD1CQ15652 2540 aa1.08□□□□□ -2.24
PABPC1-211ENST00000519596 SPRR1BP22528 89 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms