RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ABCA4P78363 2273 aa3.02□□□□□ -1.93
SQLE-203ENST00000518931 ACYP2P14621 99 aa3.01□□□□□ -1.93
SQLE-203ENST00000518931 F5P12259 2224 aa3.01□□□□□ -1.93
SQLE-203ENST00000518931 CADP27708 2225 aa3□□□□□ -1.93
SQLE-203ENST00000518931 GPR179Q6PRD1 2367 aa3□□□□□ -1.93
SQLE-203ENST00000518931 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SQLE-203ENST00000518931 CD52P31358 61 aa2.99□□□□□ -1.93
SQLE-203ENST00000518931 LINC00472Q9H8W2 130 aa2.99□□□□□ -1.93
SQLE-203ENST00000518931 Q9Y3F1 56 aa2.99□□□□□ -1.93
SQLE-203ENST00000518931 IGLV5-48A0A075B6I7 105 aa2.98□□□□□ -1.93
SQLE-203ENST00000518931 KRTAP10-1P60331 282 aa2.98□□□□□ -1.93
SQLE-203ENST00000518931 IGFL1Q6UW32 110 aa2.98□□□□□ -1.93
SQLE-203ENST00000518931 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
SQLE-203ENST00000518931 A0A1B0GU69 56 aa2.96□□□□□ -1.94
SQLE-203ENST00000518931 K7EQZ3 153 aa2.96□□□□□ -1.94
SQLE-203ENST00000518931 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
SQLE-203ENST00000518931 APELAP0DMC3 54 aa2.95□□□□□ -1.94
SQLE-203ENST00000518931 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SQLE-203ENST00000518931 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SQLE-203ENST00000518931 Q6ZRN7 208 aaPredicted RBP2.95□□□□□ -1.94
SQLE-203ENST00000518931 CCL19Q99731 98 aa2.95□□□□□ -1.94
SQLE-203ENST00000518931 PRO3102Q9H379 93 aa2.95□□□□□ -1.94
SQLE-203ENST00000518931 TOMM7Q9P0U1 55 aa2.94□□□□□ -1.94
SQLE-203ENST00000518931 RTTNQ86VV8 2226 aa2.94□□□□□ -1.94
SQLE-203ENST00000518931 C10orf99Q6UWK7 81 aa2.93□□□□□ -1.94
SQLE-203ENST00000518931 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
SQLE-203ENST00000518931 KAAG1Q9UBP8 84 aa2.93□□□□□ -1.94
SQLE-203ENST00000518931 PDE4DIPQ5VU43 2346 aa2.92□□□□□ -1.94
SQLE-203ENST00000518931 FN1P02751 2386 aaKnown RBP2.9□□□□□ -1.94
SQLE-203ENST00000518931 ANGP03950 147 aaKnown RBP2.9□□□□□ -1.95
SQLE-203ENST00000518931 WFDC13Q8IUB5 93 aa2.9□□□□□ -1.95
SQLE-203ENST00000518931 SDK1Q7Z5N4 2213 aa2.89□□□□□ -1.95
SQLE-203ENST00000518931 CACNA1AO00555 2505 aa2.89□□□□□ -1.95
SQLE-203ENST00000518931 KMT2BQ9UMN6 2715 aaPredicted RBP2.89□□□□□ -1.95
SQLE-203ENST00000518931 LYNX1G3V0Z9 82 aa2.88□□□□□ -1.95
SQLE-203ENST00000518931 MINOS1Q5TGZ0 78 aa2.88□□□□□ -1.95
SQLE-203ENST00000518931 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
SQLE-203ENST00000518931 EP400Q96L91 3159 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 A8MTW9 85 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 PCOTHQ58A44 107 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 Q6ZRX8 168 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 WFDC10BQ8IUB3 73 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 SORL1Q92673 2214 aa2.87□□□□□ -1.95
SQLE-203ENST00000518931 PTPRQQ9UMZ3 2332 aa2.86□□□□□ -1.95
SQLE-203ENST00000518931 MED13LQ71F56 2210 aa2.85□□□□□ -1.95
SQLE-203ENST00000518931 DEFB108BQ8NET1 73 aa2.85□□□□□ -1.95
SQLE-203ENST00000518931 GVQW2A0A096LPI5 108 aaPredicted RBP2.84□□□□□ -1.95
SQLE-203ENST00000518931 SPTY2D1-AS1A0A0U1RR47 76 aa2.84□□□□□ -1.95
SQLE-203ENST00000518931 NAV3Q8IVL0 2385 aa2.84□□□□□ -1.95
SQLE-203ENST00000518931 URB1O60287 2271 aaKnown RBP2.83□□□□□ -1.96
SQLE-203ENST00000518931 DEFB1P60022 68 aa2.83□□□□□ -1.96
SQLE-203ENST00000518931 SPINK13Q1W4C9 94 aa2.83□□□□□ -1.96
SQLE-203ENST00000518931 UNQ6190/PRO20217Q6UXQ8 127 aa2.83□□□□□ -1.96
SQLE-203ENST00000518931 C6orf48Q9UBA6 75 aa2.83□□□□□ -1.96
SQLE-203ENST00000518931 UTRNP46939 3433 aa2.83□□□□□ -1.96
SQLE-203ENST00000518931 LY6G6CO95867 125 aa2.82□□□□□ -1.96
SQLE-203ENST00000518931 G3V318 75 aa2.81□□□□□ -1.96
SQLE-203ENST00000518931 DEFB131AP59861 70 aa2.81□□□□□ -1.96
SQLE-203ENST00000518931 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
SQLE-203ENST00000518931 HIVEP2P31629 2446 aa2.8□□□□□ -1.96
SQLE-203ENST00000518931 MMP24-AS1A0A0U1RRL7 71 aa2.8□□□□□ -1.96
SQLE-203ENST00000518931 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
SQLE-203ENST00000518931 RHPN1-AS1Q9BWJ2 59 aa2.8□□□□□ -1.96
SQLE-203ENST00000518931 CNTRLQ7Z7A1 2325 aa2.8□□□□□ -1.96
SQLE-203ENST00000518931 ALMS1Q8TCU4 4167 aa2.79□□□□□ -1.96
SQLE-203ENST00000518931 H3BUA1 57 aa2.79□□□□□ -1.96
SQLE-203ENST00000518931 CLPSL2Q6UWE3 100 aa2.78□□□□□ -1.96
SQLE-203ENST00000518931 USMG5Q96IX5 58 aa2.78□□□□□ -1.96
SQLE-203ENST00000518931 ASCC3Q8N3C0 2202 aaKnown RBP2.78□□□□□ -1.96
SQLE-203ENST00000518931 A0A0C4DFX4 3053 aa2.77□□□□□ -1.97
SQLE-203ENST00000518931 DEFB105AQ8NG35 78 aa2.76□□□□□ -1.97
SQLE-203ENST00000518931 PLCE1Q9P212 2302 aa2.75□□□□□ -1.97
SQLE-203ENST00000518931 UNC79Q9P2D8 2635 aa2.74□□□□□ -1.97
SQLE-203ENST00000518931 ASXL3Q9C0F0 2248 aa2.74□□□□□ -1.97
SQLE-203ENST00000518931 PCNTO95613 3336 aa2.73□□□□□ -1.97
SQLE-203ENST00000518931 DEFB109BQ30KR1 87 aa2.73□□□□□ -1.97
SQLE-203ENST00000518931 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
SQLE-203ENST00000518931 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
SQLE-203ENST00000518931 H0YAA0 97 aa2.72□□□□□ -1.97
SQLE-203ENST00000518931 SPRR1AP35321 89 aa2.72□□□□□ -1.97
SQLE-203ENST00000518931 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
SQLE-203ENST00000518931 TECTAO75443 2155 aa2.71□□□□□ -1.97
SQLE-203ENST00000518931 Q6ZSA8 131 aa2.71□□□□□ -1.98
SQLE-203ENST00000518931 ICE1Q9Y2F5 2266 aa2.71□□□□□ -1.98
SQLE-203ENST00000518931 DOPEY2Q9Y3R5 2298 aa2.7□□□□□ -1.98
SQLE-203ENST00000518931 HTN1P15515 57 aa2.7□□□□□ -1.98
SQLE-203ENST00000518931 DEFB103AP81534 67 aa2.7□□□□□ -1.98
SQLE-203ENST00000518931 DEFB133Q30KQ1 61 aa2.7□□□□□ -1.98
SQLE-203ENST00000518931 CRIPTQ9P021 101 aa2.7□□□□□ -1.98
SQLE-203ENST00000518931 UBE2DNLQ8IWF7 75 aa2.69□□□□□ -1.98
SQLE-203ENST00000518931 KNL1Q8NG31 2342 aa2.69□□□□□ -1.98
SQLE-203ENST00000518931 COX6B2Q6YFQ2 88 aa2.68□□□□□ -1.98
SQLE-203ENST00000518931 ABCA1O95477 2261 aa2.68□□□□□ -1.98
SQLE-203ENST00000518931 TNRC18O15417 2968 aaPredicted RBP2.68□□□□□ -1.98
SQLE-203ENST00000518931 CACNA1GO43497 2377 aa2.67□□□□□ -1.98
SQLE-203ENST00000518931 H1FX-AS1Q4G0G2 97 aa2.66□□□□□ -1.98
SQLE-203ENST00000518931 SPRR1BP22528 89 aa2.65□□□□□ -1.99
SQLE-203ENST00000518931 BRD3OSQ6XYD6 125 aa2.65□□□□□ -1.99
SQLE-203ENST00000518931 H3BUX3 64 aa2.64□□□□□ -1.99
SQLE-203ENST00000518931 GOLGB1Q14789 3259 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 415.5 ms