RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 HMGN2P05204 90 aaKnown RBP-0.57□□□□□ -2.5
RNU6-143P-201ENST00000516942 DEFB135Q30KP9 77 aa-0.57□□□□□ -2.5
RNU6-143P-201ENST00000516942 C9orf62Q8N4C0 152 aa-0.57□□□□□ -2.5
RNU6-143P-201ENST00000516942 KNL1Q8NG31 2342 aa-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 UBR3Q6ZT12 1888 aa-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 ZNF831Q5JPB2 1677 aa-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 NMSQ5H8A3 153 aa-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 USP32Q8NFA0 1604 aa-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 CICQ96RK0 1608 aaPredicted RBP-0.58□□□□□ -2.5
RNU6-143P-201ENST00000516942 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.59□□□□□ -2.5
RNU6-143P-201ENST00000516942 LRRC9Q6ZRR7 1453 aa-0.59□□□□□ -2.5
RNU6-143P-201ENST00000516942 MAP3K4Q9Y6R4 1608 aa-0.59□□□□□ -2.5
RNU6-143P-201ENST00000516942 LTN1O94822 1766 aa-0.59□□□□□ -2.5
RNU6-143P-201ENST00000516942 COX7BP24311 80 aa-0.6□□□□□ -2.51
RNU6-143P-201ENST00000516942 DOT1LQ8TEK3 1739 aa-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 DSTQ03001 7570 aaKnown RBP-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 CDKN2A-AS1Q9UH64 79 aa-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 NESP48681 1621 aa-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 KIF14Q15058 1648 aa-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 FSIP2Q5CZC0 6907 aa-0.61□□□□□ -2.51
RNU6-143P-201ENST00000516942 SPRR2EP22531 72 aa-0.62□□□□□ -2.51
RNU6-143P-201ENST00000516942 WFDC13Q8IUB5 93 aa-0.62□□□□□ -2.51
RNU6-143P-201ENST00000516942 LAMA5O15230 3695 aa-0.62□□□□□ -2.51
RNU6-143P-201ENST00000516942 LYSTQ99698 3801 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 TNRC18O15417 2968 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 NBASA2RRP1 2371 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 NWD1Q149M9 1564 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 A0A1B0GUT8 65 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 PEA15Q15121 130 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 PLGLAQ15195 96 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 COX6B2Q6YFQ2 88 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 SYNE2Q8WXH0 6885 aaKnown RBP-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 MAGI3Q5TCQ9 1506 aa-0.64□□□□□ -2.51
RNU6-143P-201ENST00000516942 SPTBN4Q9H254 2564 aa-0.65□□□□□ -2.51
RNU6-143P-201ENST00000516942 IQCF6A8MYZ5 107 aa-0.65□□□□□ -2.51
RNU6-143P-201ENST00000516942 HEPN1Q6WQI6 88 aa-0.65□□□□□ -2.51
RNU6-143P-201ENST00000516942 PLIN4Q96Q06 1357 aa-0.66□□□□□ -2.51
RNU6-143P-201ENST00000516942 K7EP34 96 aa-0.66□□□□□ -2.52
RNU6-143P-201ENST00000516942 SMIM11AP58511 58 aa-0.66□□□□□ -2.52
RNU6-143P-201ENST00000516942 PYY3Q5JQD4 70 aa-0.66□□□□□ -2.52
RNU6-143P-201ENST00000516942 GPR98Q8WXG9 6306 aa-0.66□□□□□ -2.52
RNU6-143P-201ENST00000516942 PLXNC1O60486 1568 aa-0.66□□□□□ -2.52
RNU6-143P-201ENST00000516942 PRRC2CQ9Y520 2896 aaKnown RBP-0.67□□□□□ -2.52
RNU6-143P-201ENST00000516942 CREBBPQ92793 2442 aa-0.67□□□□□ -2.52
RNU6-143P-201ENST00000516942 WIZO95785 1651 aa-0.67□□□□□ -2.52
RNU6-143P-201ENST00000516942 KMT2CQ8NEZ4 4911 aaKnown RBP-0.67□□□□□ -2.52
RNU6-143P-201ENST00000516942 HECTD1Q9ULT8 2610 aa-0.68□□□□□ -2.52
RNU6-143P-201ENST00000516942 MYMXA0A1B0GTQ4 84 aa-0.68□□□□□ -2.52
RNU6-143P-201ENST00000516942 V9GYS6 101 aa-0.68□□□□□ -2.52
RNU6-143P-201ENST00000516942 NF1P21359 2839 aa-0.68□□□□□ -2.52
RNU6-143P-201ENST00000516942 FAT3Q8TDW7 4589 aa-0.68□□□□□ -2.52
RNU6-143P-201ENST00000516942 DIP2BQ9P265 1576 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 SONP18583 2426 aaKnown RBP-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 SCN11AQ9UI33 1791 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 ARFGEF2Q9Y6D5 1785 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 GAFA1Q96PS6 74 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 PIK3C2BO00750 1634 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 MXRA5Q9NR99 2828 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 PCLOQ9Y6V0 5065 aa-0.69□□□□□ -2.52
RNU6-143P-201ENST00000516942 NBPF19A0A087WUL8 3843 aa-0.7□□□□□ -2.52
RNU6-143P-201ENST00000516942 PVALEFA0A1B0GWK0 134 aa-0.7□□□□□ -2.52
RNU6-143P-201ENST00000516942 RABAC1Q9UI14 185 aa-0.7□□□□□ -2.52
RNU6-143P-201ENST00000516942 DNAH6Q9C0G6 4158 aa-0.71□□□□□ -2.52
RNU6-143P-201ENST00000516942 TRAV21A0A0B4J279 112 aa-0.71□□□□□ -2.52
RNU6-143P-201ENST00000516942 NDUFA3O95167 84 aa-0.71□□□□□ -2.52
RNU6-143P-201ENST00000516942 SNRPFP62306 86 aaKnown RBP-0.71□□□□□ -2.52
RNU6-143P-201ENST00000516942 PDE4DIPQ5VU43 2346 aa-0.71□□□□□ -2.52
RNU6-143P-201ENST00000516942 URB2Q14146 1524 aaKnown RBP-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 HERC1Q15751 4861 aa-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 ZZEF1O43149 2961 aa-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 CYB5AP00167 134 aa-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 RPL38P63173 70 aaKnown RBP-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 LINC00643Q86TS7 51 aa-0.72□□□□□ -2.52
RNU6-143P-201ENST00000516942 NCOA2Q15596 1464 aa-0.73□□□□□ -2.53
RNU6-143P-201ENST00000516942 S100A16Q96FQ6 103 aaKnown RBP-0.73□□□□□ -2.53
RNU6-143P-201ENST00000516942 EPG5Q9HCE0 2579 aa-0.73□□□□□ -2.53
RNU6-143P-201ENST00000516942 TEP1Q99973 2627 aaKnown RBP-0.73□□□□□ -2.53
RNU6-143P-201ENST00000516942 KRTAP19-8Q3LI54 63 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 Q9H521 79 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 CCDC88BA6NC98 1476 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 MED14O60244 1454 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 DNAH9Q9NYC9 4486 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 RB1CC1Q8TDY2 1594 aa-0.74□□□□□ -2.53
RNU6-143P-201ENST00000516942 CUBNO60494 3623 aa-0.75□□□□□ -2.53
RNU6-143P-201ENST00000516942 LCE6AA0A183 80 aa-0.75□□□□□ -2.53
RNU6-143P-201ENST00000516942 TDRG1Q3Y452 100 aa-0.75□□□□□ -2.53
RNU6-143P-201ENST00000516942 HTTP42858 3142 aa-0.75□□□□□ -2.53
RNU6-143P-201ENST00000516942 VPS13BQ7Z7G8 4022 aa-0.75□□□□□ -2.53
RNU6-143P-201ENST00000516942 MACF1Q9UPN3 7388 aaKnown RBP-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 HIVEP1P15822 2718 aa-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 DSPP15924 2871 aaKnown RBP-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 CEBPZOSA8MTT3 80 aa-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 DEPDC5O75140 1603 aa-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 PLCH1Q4KWH8 1693 aa-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 CFAP43Q8NDM7 1665 aa-0.76□□□□□ -2.53
RNU6-143P-201ENST00000516942 AKAP9Q99996 3911 aa-0.77□□□□□ -2.53
RNU6-143P-201ENST00000516942 WFDC9Q8NEX5 89 aa-0.77□□□□□ -2.53
RNU6-143P-201ENST00000516942 SPRR2FQ96RM1 72 aa-0.77□□□□□ -2.53
RNU6-143P-201ENST00000516942 SPG11Q96JI7 2443 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms