RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PLA2G1BP04054 148 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-224ENST00000508474 MUC6Q6W4X9 2439 aa4.76□□□□□ -1.65
UBE2D3-224ENST00000508474 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
UBE2D3-224ENST00000508474 HIVEP3Q5T1R4 2406 aa4.75□□□□□ -1.65
UBE2D3-224ENST00000508474 GIG44P09565 113 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-224ENST00000508474 BPTFQ12830 3046 aa4.73□□□□□ -1.65
UBE2D3-224ENST00000508474 Q96NJ1 140 aa4.73□□□□□ -1.65
UBE2D3-224ENST00000508474 SONP18583 2426 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-224ENST00000508474 CUL9Q8IWT3 2517 aa4.73□□□□□ -1.65
UBE2D3-224ENST00000508474 MKI67P46013 3256 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-224ENST00000508474 CHD7Q9P2D1 2997 aa4.72□□□□□ -1.65
UBE2D3-224ENST00000508474 TTC28Q96AY4 2481 aa4.72□□□□□ -1.65
UBE2D3-224ENST00000508474 SMR3AQ99954 134 aa4.72□□□□□ -1.65
UBE2D3-224ENST00000508474 C9orf163Q8N9P6 203 aa4.72□□□□□ -1.65
UBE2D3-224ENST00000508474 PRR26Q8N8Z3 221 aa4.71□□□□□ -1.66
UBE2D3-224ENST00000508474 C19orf73Q9NVV2 129 aa4.71□□□□□ -1.66
UBE2D3-224ENST00000508474 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
UBE2D3-224ENST00000508474 CHTF8P0CG12 524 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 FN1P02751 2386 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 A0A0G2JQZ4 141 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 A0A1W2PNN7 141 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 RTL8CO15255 209 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 BDP1A6H8Y1 2624 aa4.7□□□□□ -1.66
UBE2D3-224ENST00000508474 PIEZO2Q9H5I5 2752 aa4.69□□□□□ -1.66
UBE2D3-224ENST00000508474 NBDYA0A0U1RRE5 68 aa4.69□□□□□ -1.66
UBE2D3-224ENST00000508474 TLN1Q9Y490 2541 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-224ENST00000508474 TYMSOSQ8TAI1 123 aa4.69□□□□□ -1.66
UBE2D3-224ENST00000508474 LAMA2P24043 3122 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-224ENST00000508474 ABCA2Q9BZC7 2435 aa4.68□□□□□ -1.66
UBE2D3-224ENST00000508474 CHD9Q3L8U1 2897 aa4.68□□□□□ -1.66
UBE2D3-224ENST00000508474 ZNF861PO60384 105 aa4.67□□□□□ -1.66
UBE2D3-224ENST00000508474 CNBPP62633 177 aaKnown RBP4.67□□□□□ -1.66
UBE2D3-224ENST00000508474 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
UBE2D3-224ENST00000508474 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
UBE2D3-224ENST00000508474 C5orf42Q9H799 3197 aa4.67□□□□□ -1.66
UBE2D3-224ENST00000508474 CCDC168Q8NDH2 2452 aa4.66□□□□□ -1.66
UBE2D3-224ENST00000508474 MYO18BQ8IUG5 2567 aa4.66□□□□□ -1.66
UBE2D3-224ENST00000508474 PIEZO1Q92508 2521 aa4.65□□□□□ -1.66
UBE2D3-224ENST00000508474 NOTCH2Q04721 2471 aa4.65□□□□□ -1.66
UBE2D3-224ENST00000508474 RANBP2P49792 3224 aaKnown RBP4.65□□□□□ -1.66
UBE2D3-224ENST00000508474 J3QL48 77 aa4.65□□□□□ -1.67
UBE2D3-224ENST00000508474 HRES1P13985 223 aa4.65□□□□□ -1.67
UBE2D3-224ENST00000508474 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
UBE2D3-224ENST00000508474 SPINK7P58062 85 aa4.64□□□□□ -1.67
UBE2D3-224ENST00000508474 DMAC1Q96GE9 116 aa4.63□□□□□ -1.67
UBE2D3-224ENST00000508474 WDR87Q6ZQQ6 2873 aa4.63□□□□□ -1.67
UBE2D3-224ENST00000508474 TRANK1O15050 2925 aa4.63□□□□□ -1.67
UBE2D3-224ENST00000508474 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
UBE2D3-224ENST00000508474 ZNF462Q96JM2 2506 aa4.62□□□□□ -1.67
UBE2D3-224ENST00000508474 LAMA3Q16787 3333 aa4.62□□□□□ -1.67
UBE2D3-224ENST00000508474 A0A1B0GU33 70 aa4.62□□□□□ -1.67
UBE2D3-224ENST00000508474 SPRR1AP35321 89 aa4.62□□□□□ -1.67
UBE2D3-224ENST00000508474 USP9XQ93008 2570 aaPredicted RBP4.61□□□□□ -1.67
UBE2D3-224ENST00000508474 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
UBE2D3-224ENST00000508474 IGF2RP11717 2491 aa4.61□□□□□ -1.67
UBE2D3-224ENST00000508474 Q8NDZ9 215 aa4.6□□□□□ -1.67
UBE2D3-224ENST00000508474 ZCCHC13Q8WW36 166 aaKnown RBP4.59□□□□□ -1.67
UBE2D3-224ENST00000508474 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
UBE2D3-224ENST00000508474 IGLV7-43P04211 117 aa4.58□□□□□ -1.68
UBE2D3-224ENST00000508474 Q8N1X5 172 aa4.58□□□□□ -1.68
UBE2D3-224ENST00000508474 ABCA12Q86UK0 2595 aa4.58□□□□□ -1.68
UBE2D3-224ENST00000508474 SPRR1BP22528 89 aa4.57□□□□□ -1.68
UBE2D3-224ENST00000508474 TLN2Q9Y4G6 2542 aa4.57□□□□□ -1.68
UBE2D3-224ENST00000508474 LINC00304Q8N9R0 145 aa4.57□□□□□ -1.68
UBE2D3-224ENST00000508474 A6NN06 94 aa4.56□□□□□ -1.68
UBE2D3-224ENST00000508474 PKD1L2Q7Z442 2459 aa4.56□□□□□ -1.68
UBE2D3-224ENST00000508474 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
UBE2D3-224ENST00000508474 CDH23Q9H251 3354 aa4.55□□□□□ -1.68
UBE2D3-224ENST00000508474 CR1P17927 2039 aa4.55□□□□□ -1.68
UBE2D3-224ENST00000508474 UNC80Q8N2C7 3258 aa4.55□□□□□ -1.68
UBE2D3-224ENST00000508474 CASC10Q5T4H9 136 aa4.55□□□□□ -1.68
UBE2D3-224ENST00000508474 A0A0D9SG42 100 aa4.55□□□□□ -1.68
UBE2D3-224ENST00000508474 TNP2Q05952 138 aa4.54□□□□□ -1.68
UBE2D3-224ENST00000508474 USP9YO00507 2555 aaPredicted RBP4.54□□□□□ -1.68
UBE2D3-224ENST00000508474 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
UBE2D3-224ENST00000508474 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
UBE2D3-224ENST00000508474 A0A087WTM6 91 aa4.53□□□□□ -1.68
UBE2D3-224ENST00000508474 LCE6AA0A183 80 aa4.53□□□□□ -1.68
UBE2D3-224ENST00000508474 Q6ZR54 194 aa4.53□□□□□ -1.68
UBE2D3-224ENST00000508474 LRRK2Q5S007 2527 aa4.52□□□□□ -1.69
UBE2D3-224ENST00000508474 COX6B2Q6YFQ2 88 aa4.52□□□□□ -1.69
UBE2D3-224ENST00000508474 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 Q5W150 140 aa4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 NCOR2Q9Y618 2525 aa4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 PRUNE2Q8WUY3 3088 aa4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 SPATA8Q6RVD6 105 aa4.51□□□□□ -1.69
UBE2D3-224ENST00000508474 DOPEY1Q5JWR5 2465 aa4.5□□□□□ -1.69
UBE2D3-224ENST00000508474 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
UBE2D3-224ENST00000508474 A0A087X002 238 aa4.5□□□□□ -1.69
UBE2D3-224ENST00000508474 KRTAP10-3P60369 221 aa4.5□□□□□ -1.69
UBE2D3-224ENST00000508474 KRTAP24-1Q3LI83 254 aa4.49□□□□□ -1.69
UBE2D3-224ENST00000508474 C9orf92A6NGG3 77 aa4.49□□□□□ -1.69
UBE2D3-224ENST00000508474 TRIOO75962 3097 aa4.48□□□□□ -1.69
UBE2D3-224ENST00000508474 ROMO1P60602 79 aa4.48□□□□□ -1.69
UBE2D3-224ENST00000508474 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
UBE2D3-224ENST00000508474 SZT2Q5T011 3432 aa4.48□□□□□ -1.69
UBE2D3-224ENST00000508474 USP34Q70CQ2 3546 aa4.47□□□□□ -1.69
UBE2D3-224ENST00000508474 ANKRD17O75179 2603 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms