RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 LAMTOR3Q9UHA4 124 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.24□□□□□ -0.13
RNF4-207ENST00000506706 CCKP06307 115 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 MRPL55Q7Z7F7 128 aaKnown RBP14.24□□□□□ -0.13
RNF4-207ENST00000506706 SMCR5Q8TEV8 140 aa14.24□□□□□ -0.13
RNF4-207ENST00000506706 C16orf90A8MZG2 172 aa14.23□□□□□ -0.13
RNF4-207ENST00000506706 RBM3P98179 157 aaKnown RBP14.22□□□□□ -0.13
RNF4-207ENST00000506706 A0A096LNI7 61 aa14.21□□□□□ -0.13
RNF4-207ENST00000506706 LRCOL1A6NCL2 159 aa14.21□□□□□ -0.13
RNF4-207ENST00000506706 LINC00643Q86TS7 51 aa14.21□□□□□ -0.13
RNF4-207ENST00000506706 DNHD1Q96M86 4753 aa14.21□□□□□ -0.13
RNF4-207ENST00000506706 MEGF8Q7Z7M0 2845 aa14.21□□□□□ -0.13
RNF4-207ENST00000506706 Q6ZRN7 208 aaPredicted RBP14.2□□□□□ -0.14
RNF4-207ENST00000506706 Q6Q795 121 aa14.19□□□□□ -0.14
RNF4-207ENST00000506706 SPRR1AP35321 89 aa14.19□□□□□ -0.14
RNF4-207ENST00000506706 IGKV2-24A0A0C4DH68 120 aa14.18□□□□□ -0.14
RNF4-207ENST00000506706 TENM2Q9NT68 2774 aa14.18□□□□□ -0.14
RNF4-207ENST00000506706 STARD9Q9P2P6 4700 aa14.17□□□□□ -0.14
RNF4-207ENST00000506706 KRTAP4-16G5E9R7 235 aaPredicted RBP14.17□□□□□ -0.14
RNF4-207ENST00000506706 KRTAP21-3Q3LHN1 58 aa14.17□□□□□ -0.14
RNF4-207ENST00000506706 ETDCA0A1B0GVM5 59 aa14.16□□□□□ -0.14
RNF4-207ENST00000506706 M0R2N4 97 aa14.16□□□□□ -0.14
RNF4-207ENST00000506706 Q6ZRX8 168 aa14.16□□□□□ -0.14
RNF4-207ENST00000506706 LINC00846Q9NV44 126 aa14.16□□□□□ -0.14
RNF4-207ENST00000506706 B5MCH6 92 aa14.15□□□□□ -0.14
RNF4-207ENST00000506706 DHRS4-AS1Q9P1J3 65 aa14.15□□□□□ -0.14
RNF4-207ENST00000506706 LOC110117498A0A087WWA1 95 aa14.14□□□□□ -0.15
RNF4-207ENST00000506706 TRBV7-7A0A0K0K1E9 115 aa14.14□□□□□ -0.15
RNF4-207ENST00000506706 C9orf163Q8N9P6 203 aa14.14□□□□□ -0.15
RNF4-207ENST00000506706 DSCR8Q96T75 97 aa14.14□□□□□ -0.15
RNF4-207ENST00000506706 Q6ZQT0 140 aa14.13□□□□□ -0.15
RNF4-207ENST00000506706 PKIGQ9Y2B9 76 aa14.13□□□□□ -0.15
RNF4-207ENST00000506706 A0A1W2PNN7 141 aa14.12□□□□□ -0.15
RNF4-207ENST00000506706 NDUFV3P56181 108 aaKnown RBP14.12□□□□□ -0.15
RNF4-207ENST00000506706 VPS13DQ5THJ4 4388 aa14.12□□□□□ -0.15
RNF4-207ENST00000506706 PDE6GP18545 87 aa14.1□□□□□ -0.15
RNF4-207ENST00000506706 REG3GQ6UW15 175 aa14.1□□□□□ -0.15
RNF4-207ENST00000506706 Q9BRP9 147 aa14.1□□□□□ -0.15
RNF4-207ENST00000506706 IMUPQ9GZP8 106 aa14.1□□□□□ -0.15
RNF4-207ENST00000506706 CHTF8P0CG12 524 aa14.06□□□□□ -0.16
RNF4-207ENST00000506706 DEFB105AQ8NG35 78 aa14.05□□□□□ -0.16
RNF4-207ENST00000506706 TRBV7-4A0A0J9YYF1 115 aa14.05□□□□□ -0.16
RNF4-207ENST00000506706 Q6ZR54 194 aa14.05□□□□□ -0.16
RNF4-207ENST00000506706 Q6JHZ5 121 aa14.03□□□□□ -0.16
RNF4-207ENST00000506706 Q8N377 158 aa14.03□□□□□ -0.16
RNF4-207ENST00000506706 LINC00474Q9P2X8 69 aa14.03□□□□□ -0.16
RNF4-207ENST00000506706 UBE2BP63146 152 aa14.03□□□□□ -0.16
RNF4-207ENST00000506706 A0A087WTM6 91 aa14.02□□□□□ -0.16
RNF4-207ENST00000506706 LINC01547P58512 204 aaPredicted RBP14.02□□□□□ -0.17
RNF4-207ENST00000506706 UBL5Q9BZL1 73 aa14□□□□□ -0.17
RNF4-207ENST00000506706 PHF5AQ7RTV0 110 aaKnown RBP13.99□□□□□ -0.17
RNF4-207ENST00000506706 IGKV3D-7A0A0C4DH55 119 aa13.98□□□□□ -0.17
RNF4-207ENST00000506706 IGLV5-48A0A075B6I7 105 aa13.97□□□□□ -0.17
RNF4-207ENST00000506706 ERC2-IT1O76042 136 aa13.97□□□□□ -0.17
RNF4-207ENST00000506706 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
RNF4-207ENST00000506706 ANAPC13Q9BS18 74 aa13.97□□□□□ -0.17
RNF4-207ENST00000506706 FAM19A1Q7Z5A9 133 aa13.97□□□□□ -0.17
RNF4-207ENST00000506706 LY6G6CO95867 125 aa13.94□□□□□ -0.18
RNF4-207ENST00000506706 ATP5EP2Q5VTU8 51 aa13.94□□□□□ -0.18
RNF4-207ENST00000506706 PANO1I0J062 215 aa13.92□□□□□ -0.18
RNF4-207ENST00000506706 C1orf134Q5TEV5 83 aa13.92□□□□□ -0.18
RNF4-207ENST00000506706 DPH3Q96FX2 82 aa13.92□□□□□ -0.18
RNF4-207ENST00000506706 PRLHP81277 87 aa13.92□□□□□ -0.18
RNF4-207ENST00000506706 WWC2-AS2Q96NR7 200 aa13.92□□□□□ -0.18
RNF4-207ENST00000506706 FAM236AA0A1B0GUQ0 79 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 FAM236BA0A1B0GV22 79 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 KRTAP11-1Q8IUC1 163 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 FBN3Q75N90 2809 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 KMT2AQ03164 3969 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 C3orf22Q8N5N4 141 aa13.91□□□□□ -0.18
RNF4-207ENST00000506706 SPACA4Q8TDM5 124 aa13.9□□□□□ -0.18
RNF4-207ENST00000506706 RTL8CO15255 209 aa13.89□□□□□ -0.19
RNF4-207ENST00000506706 Q6ZVQ6 151 aa13.88□□□□□ -0.19
RNF4-207ENST00000506706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.87□□□□□ -0.19
RNF4-207ENST00000506706 TNP2Q05952 138 aa13.87□□□□□ -0.19
RNF4-207ENST00000506706 HIGD2AQ9BW72 106 aa13.86□□□□□ -0.19
RNF4-207ENST00000506706 H0Y9J4 135 aa13.86□□□□□ -0.19
RNF4-207ENST00000506706 LINC00476Q8WZB0 136 aa13.86□□□□□ -0.19
RNF4-207ENST00000506706 EPM2AB3EWF7 344 aa13.84□□□□□ -0.19
RNF4-207ENST00000506706 FUSP35637 526 aaKnown RBP eCLIP13.84□□□□□ -0.193e-6■□□□□ 10.6
RNF4-207ENST00000506706 HECTD4Q9Y4D8 3996 aa13.82□□□□□ -0.2
RNF4-207ENST00000506706 HIST1H4AP62805 103 aaKnown RBP13.81□□□□□ -0.2
RNF4-207ENST00000506706 HAMPP81172 84 aa13.81□□□□□ -0.2
RNF4-207ENST00000506706 C1orf137Q5JT78 98 aa13.81□□□□□ -0.2
RNF4-207ENST00000506706 SMIM29Q86T20 159 aa13.81□□□□□ -0.2
RNF4-207ENST00000506706 DNAH2Q9P225 4427 aa13.81□□□□□ -0.2
RNF4-207ENST00000506706 UBE2AP49459 152 aa13.81□□□□□ -0.2
RNF4-207ENST00000506706 DNAH6Q9C0G6 4158 aa13.8□□□□□ -0.2
RNF4-207ENST00000506706 A0A087WVE0 104 aa13.79□□□□□ -0.2
RNF4-207ENST00000506706 IGLV5-52A0A0A0MRZ9 124 aa13.79□□□□□ -0.2
RNF4-207ENST00000506706 BCE1O60756 84 aa13.79□□□□□ -0.2
RNF4-207ENST00000506706 F8WEM9 126 aa13.78□□□□□ -0.2
RNF4-207ENST00000506706 CXCL6P80162 114 aa13.76□□□□□ -0.21
RNF4-207ENST00000506706 A0A1B0GW54 56 aa13.76□□□□□ -0.21
RNF4-207ENST00000506706 A0A1W2PNM2 257 aa13.75□□□□□ -0.21
RNF4-207ENST00000506706 C3orf84H3BNL1 204 aa13.75□□□□□ -0.21
RNF4-207ENST00000506706 DNAH17Q9UFH2 4485 aa13.74□□□□□ -0.21
RNF4-207ENST00000506706 Q8NBF4 154 aa13.73□□□□□ -0.21
RNF4-207ENST00000506706 TGP01266 2768 aa13.73□□□□□ -0.21
RNF4-207ENST00000506706 NREPQ16612 68 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms