RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SERTAD4-AS1Q5TG53 156 aa7.33□□□□□ -1.24
NFKB1-205ENST00000505458 ETDCA0A1B0GVM5 59 aa7.33□□□□□ -1.24
NFKB1-205ENST00000505458 MRPL55Q7Z7F7 128 aaKnown RBP7.33□□□□□ -1.24
NFKB1-205ENST00000505458 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
NFKB1-205ENST00000505458 Q6ZQT0 140 aa7.31□□□□□ -1.24
NFKB1-205ENST00000505458 Q6ZRX8 168 aa7.31□□□□□ -1.24
NFKB1-205ENST00000505458 LINC00474Q9P2X8 69 aa7.31□□□□□ -1.24
NFKB1-205ENST00000505458 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
NFKB1-205ENST00000505458 NDUFV3P56181 108 aaKnown RBP7.31□□□□□ -1.24
NFKB1-205ENST00000505458 SMCR5Q8TEV8 140 aa7.31□□□□□ -1.24
NFKB1-205ENST00000505458 KRTAP1-5Q9BYS1 174 aa7.3□□□□□ -1.24
NFKB1-205ENST00000505458 A0A1B0GW54 56 aa7.3□□□□□ -1.24
NFKB1-205ENST00000505458 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
NFKB1-205ENST00000505458 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
NFKB1-205ENST00000505458 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
NFKB1-205ENST00000505458 B5MCH6 92 aa7.28□□□□□ -1.24
NFKB1-205ENST00000505458 KRTAP4-16G5E9R7 235 aaPredicted RBP7.28□□□□□ -1.24
NFKB1-205ENST00000505458 STAB2Q8WWQ8 2551 aa7.27□□□□□ -1.24
NFKB1-205ENST00000505458 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
NFKB1-205ENST00000505458 FAM19A5Q7Z5A7 132 aaPredicted RBP7.27□□□□□ -1.25
NFKB1-205ENST00000505458 C4orf48Q5BLP8 95 aa7.27□□□□□ -1.25
NFKB1-205ENST00000505458 C9orf163Q8N9P6 203 aa7.26□□□□□ -1.25
NFKB1-205ENST00000505458 DNAH9Q9NYC9 4486 aa7.26□□□□□ -1.25
NFKB1-205ENST00000505458 DYNC2H1Q8NCM8 4307 aaKnown RBP7.25□□□□□ -1.25
NFKB1-205ENST00000505458 IGLV5-48A0A075B6I7 105 aa7.25□□□□□ -1.25
NFKB1-205ENST00000505458 A0A096LNI7 61 aa7.25□□□□□ -1.25
NFKB1-205ENST00000505458 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
NFKB1-205ENST00000505458 LRCOL1A6NCL2 159 aa7.24□□□□□ -1.25
NFKB1-205ENST00000505458 RPL37AP8A6NKH3 93 aa7.23□□□□□ -1.25
NFKB1-205ENST00000505458 ATOX1O00244 68 aa7.23□□□□□ -1.25
NFKB1-205ENST00000505458 FAM236AA0A1B0GUQ0 79 aa7.23□□□□□ -1.25
NFKB1-205ENST00000505458 FAM236BA0A1B0GV22 79 aa7.23□□□□□ -1.25
NFKB1-205ENST00000505458 Q6ZRN7 208 aaPredicted RBP7.23□□□□□ -1.25
NFKB1-205ENST00000505458 H0Y9J4 135 aa7.22□□□□□ -1.25
NFKB1-205ENST00000505458 KRTAP7-1Q8IUC3 87 aa7.22□□□□□ -1.25
NFKB1-205ENST00000505458 UBE2BP63146 152 aa7.22□□□□□ -1.25
NFKB1-205ENST00000505458 CXCL6P80162 114 aa7.22□□□□□ -1.25
NFKB1-205ENST00000505458 DNAH1Q9P2D7 4330 aa7.21□□□□□ -1.26
NFKB1-205ENST00000505458 HIST1H4AP62805 103 aaKnown RBP7.21□□□□□ -1.26
NFKB1-205ENST00000505458 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
NFKB1-205ENST00000505458 Q8N377 158 aa7.2□□□□□ -1.26
NFKB1-205ENST00000505458 Q9BRP9 147 aa7.2□□□□□ -1.26
NFKB1-205ENST00000505458 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.19□□□□□ -1.26
NFKB1-205ENST00000505458 FUSP35637 526 aaKnown RBP eCLIP7.19□□□□□ -1.26
NFKB1-205ENST00000505458 F8WEM9 126 aa7.19□□□□□ -1.26
NFKB1-205ENST00000505458 BCE1O60756 84 aa7.19□□□□□ -1.26
NFKB1-205ENST00000505458 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
NFKB1-205ENST00000505458 LINC01547P58512 204 aaPredicted RBP7.18□□□□□ -1.26
NFKB1-205ENST00000505458 Q6ZVQ6 151 aa7.18□□□□□ -1.26
NFKB1-205ENST00000505458 Q6ZR54 194 aa7.17□□□□□ -1.26
NFKB1-205ENST00000505458 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
NFKB1-205ENST00000505458 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
NFKB1-205ENST00000505458 TNP2Q05952 138 aa7.16□□□□□ -1.26
NFKB1-205ENST00000505458 A0A087WTM6 91 aa7.16□□□□□ -1.26
NFKB1-205ENST00000505458 DEFB105AQ8NG35 78 aa7.16□□□□□ -1.26
NFKB1-205ENST00000505458 EPM2AB3EWF7 344 aa7.15□□□□□ -1.26
NFKB1-205ENST00000505458 SMIM20Q8N5G0 67 aa7.15□□□□□ -1.27
NFKB1-205ENST00000505458 UQCRQO14949 82 aa7.14□□□□□ -1.27
NFKB1-205ENST00000505458 HAMPP81172 84 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 C1orf137Q5JT78 98 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 IGLV8-61A0A075B6I0 122 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 Q8NBF4 154 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 SPRR1BP22528 89 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 NREPQ16612 68 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
NFKB1-205ENST00000505458 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 COX7CP15954 63 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 UBE2AP49459 152 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 C3orf22Q8N5N4 141 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
NFKB1-205ENST00000505458 SERP2Q8N6R1 65 aa7.11□□□□□ -1.27
NFKB1-205ENST00000505458 ST20-AS1Q8NBB2 130 aa7.1□□□□□ -1.27
NFKB1-205ENST00000505458 M0R2N4 97 aa7.1□□□□□ -1.27
NFKB1-205ENST00000505458 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
NFKB1-205ENST00000505458 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
NFKB1-205ENST00000505458 RTL8CO15255 209 aa7.1□□□□□ -1.27
NFKB1-205ENST00000505458 HIGD2AQ9BW72 106 aa7.09□□□□□ -1.27
NFKB1-205ENST00000505458 DPH3Q96FX2 82 aa7.09□□□□□ -1.27
NFKB1-205ENST00000505458 PRLHP81277 87 aa7.09□□□□□ -1.28
NFKB1-205ENST00000505458 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
NFKB1-205ENST00000505458 SMIM29Q86T20 159 aa7.07□□□□□ -1.28
NFKB1-205ENST00000505458 BPY2O14599 106 aa7.07□□□□□ -1.28
NFKB1-205ENST00000505458 CRYGAP11844 174 aa7.07□□□□□ -1.28
NFKB1-205ENST00000505458 CCDC179H3BU77 68 aa7.07□□□□□ -1.28
NFKB1-205ENST00000505458 A0A087WVE0 104 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 C3orf84H3BNL1 204 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 LINC00476Q8WZB0 136 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 VPS13DQ5THJ4 4388 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 A0A1W2PNM2 257 aa7.06□□□□□ -1.28
NFKB1-205ENST00000505458 RPL37AP61513 92 aaKnown RBP7.06□□□□□ -1.28
NFKB1-205ENST00000505458 IGLV5-52A0A0A0MRZ9 124 aa7.05□□□□□ -1.28
NFKB1-205ENST00000505458 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
NFKB1-205ENST00000505458 LY6G6CO95867 125 aa7.04□□□□□ -1.28
NFKB1-205ENST00000505458 TRAV7A0A075B6U4 112 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms