RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 TDRG1Q3Y452 100 aa-0.1□□□□□ -2.43
UBE2B-202ENST00000499038 FLNBO75369 2602 aaKnown RBP-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 HECTD4Q9Y4D8 3996 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 KANTRA0A1W2PQU2 76 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 NDUFB1O75438 58 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 COX6B2Q6YFQ2 88 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 RB1CC1Q8TDY2 1594 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 RGPD8O14715 1765 aaPredicted RBP-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 RGPD5Q99666 1765 aa-0.11□□□□□ -2.43
UBE2B-202ENST00000499038 KMT2AQ03164 3969 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 URB2Q14146 1524 aaKnown RBP-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 USP32Q8NFA0 1604 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 CNOT1A5YKK6 2376 aaKnown RBP-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 POLR1AO95602 1720 aaPredicted RBP-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 NDUFA3O95167 84 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 PCNX1Q96RV3 2341 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 BSNQ9UPA5 3926 aa-0.12□□□□□ -2.43
UBE2B-202ENST00000499038 TIAM2Q8IVF5 1701 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 DCHS2Q6V1P9 2916 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 LTN1O94822 1766 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 MED14O60244 1454 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 NCOA2Q15596 1464 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 ZANQ9Y493 2812 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 LRP2P98164 4655 aa-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 MACF1Q9UPN3 7388 aaKnown RBP-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 CICQ96RK0 1608 aaPredicted RBP-0.13□□□□□ -2.43
UBE2B-202ENST00000499038 ZNF831Q5JPB2 1677 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 NWD1Q149M9 1564 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 ADIRFQ15847 76 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 ST20Q9HBF5 79 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 C4AP0C0L4 1744 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 C4BP0C0L5 1744 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 DOT1LQ8TEK3 1739 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 COL6A3P12111 3177 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 PTPN23Q9H3S7 1636 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 MAGI3Q5TCQ9 1506 aa-0.14□□□□□ -2.43
UBE2B-202ENST00000499038 ADAMTS12P58397 1594 aa-0.15□□□□□ -2.43
UBE2B-202ENST00000499038 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
UBE2B-202ENST00000499038 PIK3C2BO00750 1634 aa-0.15□□□□□ -2.43
UBE2B-202ENST00000499038 S100A13Q99584 98 aa-0.15□□□□□ -2.43
UBE2B-202ENST00000499038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.15□□□□□ -2.43
UBE2B-202ENST00000499038 CCDC18Q5T9S5 1454 aa-0.16□□□□□ -2.43
UBE2B-202ENST00000499038 NESP48681 1621 aa-0.16□□□□□ -2.43
UBE2B-202ENST00000499038 UMAD1C9J7I0 102 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 H0YGG7 62 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 IFI6P09912 130 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 SPRR2AP35326 72 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 IFI27P40305 119 aaPredicted RBP-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 ATP5EP2Q5VTU8 51 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 DIP2BQ9P265 1576 aa-0.16□□□□□ -2.44
UBE2B-202ENST00000499038 ARFGEF2Q9Y6D5 1785 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 C3orf79P0CE67 100 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 KRTAP6-2Q3LI66 62 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 PDE4DIPQ5VU43 2346 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 PRO3102Q9H379 93 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 CCDC88BA6NC98 1476 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 ERVK-7P63135 1459 aa-0.17□□□□□ -2.44
UBE2B-202ENST00000499038 DCAF1Q9Y4B6 1507 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 STAB2Q8WWQ8 2551 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 A0A087WXM4 84 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 H3BUT2 72 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 LINC00158P58513 81 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 NREPQ16612 68 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 KRTAP19-7Q3SYF9 63 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 DEFB121Q5J5C9 76 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 NBASA2RRP1 2371 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 SETD2Q9BYW2 2564 aaPredicted RBP-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 KDM5DQ9BY66 1539 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 CREBBPQ92793 2442 aa-0.18□□□□□ -2.44
UBE2B-202ENST00000499038 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 PLXNC1O60486 1568 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 REV3LO60673 3130 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 LCE6AA0A183 80 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 NDUFA4O00483 81 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 SMIM13P0DJ93 91 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 BVES-AS1Q5T3Y7 98 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 ABCC1P33527 1531 aa-0.19□□□□□ -2.44
UBE2B-202ENST00000499038 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 WIZO95785 1651 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 ARHGAP35Q9NRY4 1499 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 HECTD1Q9ULT8 2610 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 NBEAL1Q6ZS30 2694 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 SPTBN4Q9H254 2564 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 SVEP1Q4LDE5 3571 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 DEPDC5O75140 1603 aa-0.2□□□□□ -2.44
UBE2B-202ENST00000499038 PLCH1Q4KWH8 1693 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 CFAP43Q8NDM7 1665 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 SCN11AQ9UI33 1791 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 H0YAA0 97 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 DEFA5Q01523 94 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 CFAP74Q9C0B2 1584 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 AKAP13Q12802 2813 aa-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 DDX60LQ5H9U9 1706 aaKnown RBP-0.21□□□□□ -2.44
UBE2B-202ENST00000499038 MAP1AP78559 2803 aaPredicted RBP-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms