RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
UBE2B-202ENST00000499038 CHIC1Q5VXU3 224 aa26.21■■□□□ 1.79
UBE2B-202ENST00000499038 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
UBE2B-202ENST00000499038 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
UBE2B-202ENST00000499038 FOXD1Q16676 465 aa21.56■■□□□ 1.04
UBE2B-202ENST00000499038 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
UBE2B-202ENST00000499038 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
UBE2B-202ENST00000499038 ADRA2BP18089 450 aa20.39■□□□□ 0.85
UBE2B-202ENST00000499038 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
UBE2B-202ENST00000499038 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
UBE2B-202ENST00000499038 MSH5O43196 834 aa20.09■□□□□ 0.81
UBE2B-202ENST00000499038 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
UBE2B-202ENST00000499038 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
UBE2B-202ENST00000499038 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
UBE2B-202ENST00000499038 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
UBE2B-202ENST00000499038 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
UBE2B-202ENST00000499038 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
UBE2B-202ENST00000499038 HOXD11P31277 338 aaPredicted RBP17.88■□□□□ 0.45
UBE2B-202ENST00000499038 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
UBE2B-202ENST00000499038 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
UBE2B-202ENST00000499038 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
UBE2B-202ENST00000499038 KCNA4P22459 653 aa17.67■□□□□ 0.42
UBE2B-202ENST00000499038 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
UBE2B-202ENST00000499038 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
UBE2B-202ENST00000499038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBE2B-202ENST00000499038 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
UBE2B-202ENST00000499038 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
UBE2B-202ENST00000499038 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
UBE2B-202ENST00000499038 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
UBE2B-202ENST00000499038 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
UBE2B-202ENST00000499038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
UBE2B-202ENST00000499038 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
UBE2B-202ENST00000499038 CAPN15O75808 1086 aa16.42■□□□□ 0.22
UBE2B-202ENST00000499038 APLP2Q06481 763 aa16.41■□□□□ 0.22
UBE2B-202ENST00000499038 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
UBE2B-202ENST00000499038 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
UBE2B-202ENST00000499038 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
UBE2B-202ENST00000499038 SAMD1Q6SPF0 538 aaPredicted RBP16.37■□□□□ 0.21
UBE2B-202ENST00000499038 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
UBE2B-202ENST00000499038 ZBTB22O15209 634 aa16.21■□□□□ 0.19
UBE2B-202ENST00000499038 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
UBE2B-202ENST00000499038 DSG3P32926 999 aa16.17■□□□□ 0.18
UBE2B-202ENST00000499038 ABCB7O75027 752 aa16.04■□□□□ 0.16
UBE2B-202ENST00000499038 POTEHQ6S545 545 aa15.93■□□□□ 0.14
UBE2B-202ENST00000499038 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
UBE2B-202ENST00000499038 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
UBE2B-202ENST00000499038 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
UBE2B-202ENST00000499038 POLA2Q14181 598 aa15.85■□□□□ 0.13
UBE2B-202ENST00000499038 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
UBE2B-202ENST00000499038 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
UBE2B-202ENST00000499038 RBM42Q9BTD8 480 aaKnown RBP15.48■□□□□ 0.07
UBE2B-202ENST00000499038 FBLN2P98095 1184 aa15.38■□□□□ 0.05
UBE2B-202ENST00000499038 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
UBE2B-202ENST00000499038 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
UBE2B-202ENST00000499038 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
UBE2B-202ENST00000499038 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
UBE2B-202ENST00000499038 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
UBE2B-202ENST00000499038 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
UBE2B-202ENST00000499038 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
UBE2B-202ENST00000499038 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
UBE2B-202ENST00000499038 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
UBE2B-202ENST00000499038 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
UBE2B-202ENST00000499038 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
UBE2B-202ENST00000499038 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
UBE2B-202ENST00000499038 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
UBE2B-202ENST00000499038 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
UBE2B-202ENST00000499038 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
UBE2B-202ENST00000499038 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
UBE2B-202ENST00000499038 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBE2B-202ENST00000499038 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
UBE2B-202ENST00000499038 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
UBE2B-202ENST00000499038 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
UBE2B-202ENST00000499038 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
UBE2B-202ENST00000499038 FKBP8Q14318 412 aa14.39□□□□□ -0.11
UBE2B-202ENST00000499038 CHADLQ6NUI6 762 aa14.39□□□□□ -0.11
UBE2B-202ENST00000499038 HAX1O00165 279 aa14.36□□□□□ -0.11
UBE2B-202ENST00000499038 PROM2Q8N271 834 aa14.35□□□□□ -0.11
UBE2B-202ENST00000499038 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
UBE2B-202ENST00000499038 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
UBE2B-202ENST00000499038 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
UBE2B-202ENST00000499038 EVX2Q03828 476 aa14.11□□□□□ -0.15
UBE2B-202ENST00000499038 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
UBE2B-202ENST00000499038 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
UBE2B-202ENST00000499038 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBE2B-202ENST00000499038 MIER1Q8N108 512 aa14.04□□□□□ -0.16
UBE2B-202ENST00000499038 FBXO3Q9UK99 471 aa14□□□□□ -0.17
UBE2B-202ENST00000499038 PLCD3Q8N3E9 789 aa13.99□□□□□ -0.17
UBE2B-202ENST00000499038 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
UBE2B-202ENST00000499038 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
UBE2B-202ENST00000499038 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
UBE2B-202ENST00000499038 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
UBE2B-202ENST00000499038 GABBR2O75899 941 aa13.86□□□□□ -0.19
UBE2B-202ENST00000499038 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
UBE2B-202ENST00000499038 VASPP50552 380 aaPredicted RBP13.8□□□□□ -0.2
UBE2B-202ENST00000499038 CLCN6P51797 869 aa13.79□□□□□ -0.2
UBE2B-202ENST00000499038 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
UBE2B-202ENST00000499038 PHF12Q96QT6 1004 aa13.75□□□□□ -0.21
UBE2B-202ENST00000499038 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
UBE2B-202ENST00000499038 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
UBE2B-202ENST00000499038 LHX8Q68G74 356 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms