RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 AHCTF1Q8WYP5 2266 aa1.78□□□□□ -2.12
SNRNP48-202ENST00000496946 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
SNRNP48-202ENST00000496946 A0A1W2PNN7 141 aa1.78□□□□□ -2.12
SNRNP48-202ENST00000496946 KRTAP11-1Q8IUC1 163 aa1.78□□□□□ -2.12
SNRNP48-202ENST00000496946 PRO2289Q9P1D8 64 aa1.78□□□□□ -2.12
SNRNP48-202ENST00000496946 COL27A1Q8IZC6 1860 aaPredicted RBP1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 WFDC13Q8IUB5 93 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 SPTY2D1-AS1A0A0U1RR47 76 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 H0YGG7 62 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 PCOTHQ58A44 107 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 PRR9Q5T870 116 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 CACNA1BQ00975 2339 aa1.77□□□□□ -2.13
SNRNP48-202ENST00000496946 ABCA1O95477 2261 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 A0A0G2JQZ4 141 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 TP53AIP1Q9HCN2 124 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 R4GN34 69 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 ASCC3Q8N3C0 2202 aaKnown RBP1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 BRWD1Q9NSI6 2320 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 K7EIM0 57 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 IGLV6-57P01721 117 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 KRTAP10-3P60369 221 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 WFDC10BQ8IUB3 73 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 TOMM7Q9P0U1 55 aa1.76□□□□□ -2.13
SNRNP48-202ENST00000496946 IGLV5-48A0A075B6I7 105 aa1.75□□□□□ -2.13
SNRNP48-202ENST00000496946 COX14Q96I36 57 aa1.75□□□□□ -2.13
SNRNP48-202ENST00000496946 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
SNRNP48-202ENST00000496946 MINOS1Q5TGZ0 78 aa1.75□□□□□ -2.13
SNRNP48-202ENST00000496946 PSORS1C2Q9UIG4 136 aa1.75□□□□□ -2.13
SNRNP48-202ENST00000496946 A0A1B0GVY2 172 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 LY6G6CO95867 125 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 ANAPC11Q9NYG5 84 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 TECTAO75443 2155 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 C6orf48Q9UBA6 75 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 FAM208BQ5VWN6 2430 aa1.74□□□□□ -2.13
SNRNP48-202ENST00000496946 IGKV2-24A0A0C4DH68 120 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 LYNX1G3V0Z9 82 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 TRIOBPQ9H2D6 2365 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 BIRC6Q9NR09 4857 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 FAT3Q8TDW7 4589 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 CNOT1A5YKK6 2376 aaKnown RBP1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 GPR179Q6PRD1 2367 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 NAV3Q8IVL0 2385 aa1.73□□□□□ -2.13
SNRNP48-202ENST00000496946 CCL26Q9Y258 94 aa1.72□□□□□ -2.13
SNRNP48-202ENST00000496946 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.72□□□□□ -2.133e-9■□□□□ 11.1
SNRNP48-202ENST00000496946 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
SNRNP48-202ENST00000496946 CRIPTQ9P021 101 aa1.72□□□□□ -2.13
SNRNP48-202ENST00000496946 A8MTW9 85 aa1.71□□□□□ -2.13
SNRNP48-202ENST00000496946 TPRXLQ17RH7 258 aa1.71□□□□□ -2.13
SNRNP48-202ENST00000496946 G3V318 75 aa1.71□□□□□ -2.14
SNRNP48-202ENST00000496946 APELAP0DMC3 54 aa1.71□□□□□ -2.14
SNRNP48-202ENST00000496946 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
SNRNP48-202ENST00000496946 LY6EQ16553 131 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 Q6ZRX8 168 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 KAAG1Q9UBP8 84 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 CACNA1EQ15878 2313 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 ICE1Q9Y2F5 2266 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 EPG5Q9HCE0 2579 aa1.7□□□□□ -2.14
SNRNP48-202ENST00000496946 MAST4O15021 2626 aa1.68□□□□□ -2.14
SNRNP48-202ENST00000496946 MMP24-AS1A0A0U1RRL7 71 aa1.68□□□□□ -2.14
SNRNP48-202ENST00000496946 H0YAA0 97 aa1.68□□□□□ -2.14
SNRNP48-202ENST00000496946 DEFB110Q30KQ9 67 aa1.68□□□□□ -2.14
SNRNP48-202ENST00000496946 PLAC4Q8WY50 150 aa1.68□□□□□ -2.14
SNRNP48-202ENST00000496946 ALMS1Q8TCU4 4167 aa1.67□□□□□ -2.14
SNRNP48-202ENST00000496946 FN1P02751 2386 aaKnown RBP1.67□□□□□ -2.14
SNRNP48-202ENST00000496946 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
SNRNP48-202ENST00000496946 DEFB131AP59861 70 aa1.67□□□□□ -2.14
SNRNP48-202ENST00000496946 INE1O15225 51 aa1.66□□□□□ -2.14
SNRNP48-202ENST00000496946 MRPL34Q9BQ48 92 aaKnown RBP1.66□□□□□ -2.14
SNRNP48-202ENST00000496946 A0A0C4DFX4 3053 aa1.66□□□□□ -2.14
SNRNP48-202ENST00000496946 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
SNRNP48-202ENST00000496946 CACNA1GO43497 2377 aa1.65□□□□□ -2.14
SNRNP48-202ENST00000496946 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 COL6A6A6NMZ7 2263 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 WNK2Q9Y3S1 2297 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 Q6ZSA8 131 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 PCLOQ9Y6V0 5065 aa1.65□□□□□ -2.15
SNRNP48-202ENST00000496946 RYR3Q15413 4870 aa1.64□□□□□ -2.15
SNRNP48-202ENST00000496946 HELZ2Q9BYK8 2649 aaKnown RBP1.64□□□□□ -2.15
SNRNP48-202ENST00000496946 IGFL1Q6UW32 110 aa1.64□□□□□ -2.15
SNRNP48-202ENST00000496946 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
SNRNP48-202ENST00000496946 NOTCH2Q04721 2471 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 TPRP12270 2363 aaKnown RBP1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 KRTAP12-2P59991 146 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 COX6B2Q6YFQ2 88 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 ABCA2Q9BZC7 2435 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 USP24Q9UPU5 2620 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 DEFB1P60022 68 aa1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 FLG2Q5D862 2391 aaPredicted RBP1.63□□□□□ -2.15
SNRNP48-202ENST00000496946 IGF2RP11717 2491 aa1.62□□□□□ -2.15
SNRNP48-202ENST00000496946 H1FX-AS1Q4G0G2 97 aa1.62□□□□□ -2.15
SNRNP48-202ENST00000496946 Q6ZRN7 208 aaPredicted RBP1.62□□□□□ -2.15
SNRNP48-202ENST00000496946 RP1L1Q8IWN7 2480 aaPredicted RBP1.61□□□□□ -2.15
SNRNP48-202ENST00000496946 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
SNRNP48-202ENST00000496946 NCOR1O75376 2440 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms