RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
COL16A1-215ENST00000488897 PDE6GP18545 87 aa12.11□□□□□ -0.47
COL16A1-215ENST00000488897 Q6ZQY7 126 aa12.1□□□□□ -0.47
COL16A1-215ENST00000488897 DSCR8Q96T75 97 aa12.1□□□□□ -0.47
COL16A1-215ENST00000488897 C3orf84H3BNL1 204 aa12.09□□□□□ -0.47
COL16A1-215ENST00000488897 XAGE1AQ9HD64 81 aa12.09□□□□□ -0.47
COL16A1-215ENST00000488897 GHRHP01286 108 aa12.09□□□□□ -0.47
COL16A1-215ENST00000488897 UPK3BQ9BT76 320 aa12.09□□□□□ -0.47
COL16A1-215ENST00000488897 H3BNG1 76 aa12.08□□□□□ -0.48
COL16A1-215ENST00000488897 M0R2N4 97 aa12.08□□□□□ -0.48
COL16A1-215ENST00000488897 FAM19A1Q7Z5A9 133 aa12.08□□□□□ -0.48
COL16A1-215ENST00000488897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.07□□□□□ -0.48
COL16A1-215ENST00000488897 UBE2DNLQ8IWF7 75 aa12.07□□□□□ -0.48
COL16A1-215ENST00000488897 RYR3Q15413 4870 aa12.07□□□□□ -0.48
COL16A1-215ENST00000488897 ZNF73O43830 326 aaPredicted RBP12.07□□□□□ -0.48
COL16A1-215ENST00000488897 TRBV7-6A0A0J9YX20 115 aa12.06□□□□□ -0.48
COL16A1-215ENST00000488897 COX7BP24311 80 aa12.06□□□□□ -0.48
COL16A1-215ENST00000488897 CAMK2N2Q96S95 79 aa12.06□□□□□ -0.48
COL16A1-215ENST00000488897 DNAH2Q9P225 4427 aa12.06□□□□□ -0.48
COL16A1-215ENST00000488897 TMEM258P61165 79 aa12.04□□□□□ -0.48
COL16A1-215ENST00000488897 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
COL16A1-215ENST00000488897 CYSTM1Q9H1C7 97 aa12.03□□□□□ -0.48
COL16A1-215ENST00000488897 J3KT08 172 aa12.03□□□□□ -0.48
COL16A1-215ENST00000488897 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
COL16A1-215ENST00000488897 VPREB1P12018 145 aa12.02□□□□□ -0.48
COL16A1-215ENST00000488897 KRTAP26-1Q6PEX3 210 aa12.02□□□□□ -0.49
COL16A1-215ENST00000488897 M0R378 163 aa12.01□□□□□ -0.49
COL16A1-215ENST00000488897 RPS28P62857 69 aaKnown RBP12.01□□□□□ -0.49
COL16A1-215ENST00000488897 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
COL16A1-215ENST00000488897 LINC01547P58512 204 aaPredicted RBP12.01□□□□□ -0.49
COL16A1-215ENST00000488897 Q6ZVQ6 151 aa12.01□□□□□ -0.49
COL16A1-215ENST00000488897 LINC00476Q8WZB0 136 aa12.01□□□□□ -0.49
COL16A1-215ENST00000488897 FRAS1Q86XX4 4008 aa12.01□□□□□ -0.49
COL16A1-215ENST00000488897 BCE1O60756 84 aa12□□□□□ -0.49
COL16A1-215ENST00000488897 RYR2Q92736 4967 aa11.99□□□□□ -0.49
COL16A1-215ENST00000488897 TRBV7-4A0A0J9YYF1 115 aa11.99□□□□□ -0.49
COL16A1-215ENST00000488897 NDUFC2-KCTD14E9PQ53 114 aa11.99□□□□□ -0.49
COL16A1-215ENST00000488897 HAMPP81172 84 aa11.99□□□□□ -0.49
COL16A1-215ENST00000488897 Q6ZRU5 148 aa11.99□□□□□ -0.49
COL16A1-215ENST00000488897 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
COL16A1-215ENST00000488897 CXCL6P80162 114 aa11.97□□□□□ -0.49
COL16A1-215ENST00000488897 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.49
COL16A1-215ENST00000488897 F8WDY8 70 aa11.96□□□□□ -0.49
COL16A1-215ENST00000488897 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.5
COL16A1-215ENST00000488897 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
COL16A1-215ENST00000488897 LINC00528Q8N1L1 170 aa11.94□□□□□ -0.5
COL16A1-215ENST00000488897 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
COL16A1-215ENST00000488897 TRAV7A0A075B6U4 112 aa11.92□□□□□ -0.5
COL16A1-215ENST00000488897 LINC01556Q5JQF7 62 aa11.91□□□□□ -0.5
COL16A1-215ENST00000488897 Q6ZRP5 223 aa11.9□□□□□ -0.5
COL16A1-215ENST00000488897 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
COL16A1-215ENST00000488897 C20orf197Q8N268 126 aa11.89□□□□□ -0.51
COL16A1-215ENST00000488897 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
COL16A1-215ENST00000488897 LCE6AA0A183 80 aa11.88□□□□□ -0.51
COL16A1-215ENST00000488897 FAM19A5Q7Z5A7 132 aaPredicted RBP11.88□□□□□ -0.51
COL16A1-215ENST00000488897 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
COL16A1-215ENST00000488897 NBDYA0A0U1RRE5 68 aa11.87□□□□□ -0.51
COL16A1-215ENST00000488897 NKAPP1Q8N9T2 125 aa11.85□□□□□ -0.51
COL16A1-215ENST00000488897 KCNQ1DNQ9H478 68 aa11.85□□□□□ -0.51
COL16A1-215ENST00000488897 FUSP35637 526 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL16A1-215ENST00000488897 SCXQ7RTU7 201 aa11.81□□□□□ -0.52
COL16A1-215ENST00000488897 Q6ZR54 194 aa11.8□□□□□ -0.52
COL16A1-215ENST00000488897 FAT2Q9NYQ8 4349 aa11.8□□□□□ -0.52
COL16A1-215ENST00000488897 TLX1NBP0CAT3 122 aa11.79□□□□□ -0.52
COL16A1-215ENST00000488897 KLKP1Q107X0 134 aa11.79□□□□□ -0.52
COL16A1-215ENST00000488897 C7orf33Q8WU49 177 aa11.79□□□□□ -0.52
COL16A1-215ENST00000488897 SERTAD4-AS1Q5TG53 156 aa11.78□□□□□ -0.52
COL16A1-215ENST00000488897 PLA2G2DQ9UNK4 145 aa11.78□□□□□ -0.52
COL16A1-215ENST00000488897 DNAH17Q9UFH2 4485 aa11.77□□□□□ -0.52
COL16A1-215ENST00000488897 DNAH6Q9C0G6 4158 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 H7BZZ5 65 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 NREPQ16612 68 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 DHRS4-AS1Q9P1J3 65 aa11.76□□□□□ -0.53
COL16A1-215ENST00000488897 OXTP01178 125 aa11.75□□□□□ -0.53
COL16A1-215ENST00000488897 Q8N377 158 aa11.75□□□□□ -0.53
COL16A1-215ENST00000488897 DEFB105AQ8NG35 78 aa11.74□□□□□ -0.53
COL16A1-215ENST00000488897 IGLV5-48A0A075B6I7 105 aa11.74□□□□□ -0.53
COL16A1-215ENST00000488897 RTL8CO15255 209 aa11.73□□□□□ -0.53
COL16A1-215ENST00000488897 IGLV5-37A0A075B6J1 123 aa11.72□□□□□ -0.53
COL16A1-215ENST00000488897 PRYO14603 147 aa11.72□□□□□ -0.53
COL16A1-215ENST00000488897 C1orf134Q5TEV5 83 aa11.72□□□□□ -0.53
COL16A1-215ENST00000488897 BPY2O14599 106 aa11.71□□□□□ -0.53
COL16A1-215ENST00000488897 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
COL16A1-215ENST00000488897 Q6ZRX8 168 aa11.71□□□□□ -0.53
COL16A1-215ENST00000488897 A0A1B0GW54 56 aa11.71□□□□□ -0.54
COL16A1-215ENST00000488897 SNURFQ9Y675 71 aa11.71□□□□□ -0.54
COL16A1-215ENST00000488897 PKD1P98161 4303 aa11.71□□□□□ -0.54
COL16A1-215ENST00000488897 NDUFC1O43677 76 aa11.7□□□□□ -0.54
COL16A1-215ENST00000488897 TNP2Q05952 138 aa11.7□□□□□ -0.54
COL16A1-215ENST00000488897 RMI2Q96E14 147 aa11.7□□□□□ -0.54
COL16A1-215ENST00000488897 PKHD1P08F94 4074 aa11.7□□□□□ -0.54
COL16A1-215ENST00000488897 IGLV1-50A0A075B6I6 118 aa11.69□□□□□ -0.54
COL16A1-215ENST00000488897 KRTAP4-16G5E9R7 235 aaPredicted RBP11.69□□□□□ -0.54
COL16A1-215ENST00000488897 PSCAO43653 123 aa11.69□□□□□ -0.54
COL16A1-215ENST00000488897 IGKV4-1P06312 121 aa11.69□□□□□ -0.54
COL16A1-215ENST00000488897 DNAH11Q96DT5 4516 aa11.69□□□□□ -0.54
COL16A1-215ENST00000488897 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
COL16A1-215ENST00000488897 RPL37AP8A6NKH3 93 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms