RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 Q6ZRN7 208 aaPredicted RBP12.74□□□□□ -0.37
CHKB-209ENST00000481673 DHRS4-AS1Q9P1J3 65 aa12.74□□□□□ -0.37
CHKB-209ENST00000481673 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
CHKB-209ENST00000481673 DNHD1Q96M86 4753 aa12.74□□□□□ -0.37
CHKB-209ENST00000481673 CSMD3Q7Z407 3707 aa12.73□□□□□ -0.37
CHKB-209ENST00000481673 PDE6GP18545 87 aa12.73□□□□□ -0.37
CHKB-209ENST00000481673 C21orf62-AS1Q17RA5 79 aa12.73□□□□□ -0.37
CHKB-209ENST00000481673 LINC00643Q86TS7 51 aa12.72□□□□□ -0.37
CHKB-209ENST00000481673 KRTAP7-1Q8IUC3 87 aa12.72□□□□□ -0.37
CHKB-209ENST00000481673 C9orf163Q8N9P6 203 aa12.72□□□□□ -0.37
CHKB-209ENST00000481673 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.37
CHKB-209ENST00000481673 Q6Q795 121 aa12.71□□□□□ -0.37
CHKB-209ENST00000481673 FAM19A5Q7Z5A7 132 aaPredicted RBP12.71□□□□□ -0.37
CHKB-209ENST00000481673 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
CHKB-209ENST00000481673 PLECQ15149 4684 aaKnown RBP12.7□□□□□ -0.38
CHKB-209ENST00000481673 A0A096LNI7 61 aa12.7□□□□□ -0.38
CHKB-209ENST00000481673 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
CHKB-209ENST00000481673 KRTAP4-16G5E9R7 235 aaPredicted RBP12.7□□□□□ -0.38
CHKB-209ENST00000481673 Q6ZRX8 168 aa12.7□□□□□ -0.38
CHKB-209ENST00000481673 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.69□□□□□ -0.38
CHKB-209ENST00000481673 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
CHKB-209ENST00000481673 RPL37AP8A6NKH3 93 aa12.69□□□□□ -0.38
CHKB-209ENST00000481673 DNAH7Q8WXX0 4024 aa12.68□□□□□ -0.38
CHKB-209ENST00000481673 B5MCH6 92 aa12.68□□□□□ -0.38
CHKB-209ENST00000481673 DSCR8Q96T75 97 aa12.68□□□□□ -0.38
CHKB-209ENST00000481673 IMUPQ9GZP8 106 aa12.67□□□□□ -0.38
CHKB-209ENST00000481673 LYSTQ99698 3801 aa12.66□□□□□ -0.38
CHKB-209ENST00000481673 IGKV2-24A0A0C4DH68 120 aa12.65□□□□□ -0.38
CHKB-209ENST00000481673 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
CHKB-209ENST00000481673 REG3GQ6UW15 175 aa12.64□□□□□ -0.39
CHKB-209ENST00000481673 Q6ZR54 194 aa12.64□□□□□ -0.39
CHKB-209ENST00000481673 NDUFV3P56181 108 aaKnown RBP12.63□□□□□ -0.39
CHKB-209ENST00000481673 M0R2N4 97 aa12.63□□□□□ -0.39
CHKB-209ENST00000481673 Q6ZQT0 140 aa12.63□□□□□ -0.39
CHKB-209ENST00000481673 SMCR5Q8TEV8 140 aa12.62□□□□□ -0.39
CHKB-209ENST00000481673 A0A1B0GV72 72 aa12.61□□□□□ -0.39
CHKB-209ENST00000481673 A0A1W2PNN7 141 aa12.61□□□□□ -0.39
CHKB-209ENST00000481673 LINC00846Q9NV44 126 aa12.61□□□□□ -0.39
CHKB-209ENST00000481673 VPS13DQ5THJ4 4388 aa12.6□□□□□ -0.39
CHKB-209ENST00000481673 A0A087WTM6 91 aa12.59□□□□□ -0.39
CHKB-209ENST00000481673 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.4
CHKB-209ENST00000481673 WWC2-AS2Q96NR7 200 aa12.58□□□□□ -0.4
CHKB-209ENST00000481673 Q9BRP9 147 aa12.58□□□□□ -0.4
CHKB-209ENST00000481673 DNAH10Q8IVF4 4471 aa12.57□□□□□ -0.4
CHKB-209ENST00000481673 STARD9Q9P2P6 4700 aa12.57□□□□□ -0.4
CHKB-209ENST00000481673 FBN3Q75N90 2809 aa12.56□□□□□ -0.4
CHKB-209ENST00000481673 UBL5Q9BZL1 73 aa12.55□□□□□ -0.4
CHKB-209ENST00000481673 IGLV5-48A0A075B6I7 105 aa12.55□□□□□ -0.4
CHKB-209ENST00000481673 UBE2BP63146 152 aa12.55□□□□□ -0.4
CHKB-209ENST00000481673 Q6JHZ5 121 aa12.55□□□□□ -0.4
CHKB-209ENST00000481673 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
CHKB-209ENST00000481673 Q8N377 158 aa12.54□□□□□ -0.4
CHKB-209ENST00000481673 ATP5EP2Q5VTU8 51 aa12.53□□□□□ -0.4
CHKB-209ENST00000481673 LINC01547P58512 204 aaPredicted RBP12.52□□□□□ -0.41
CHKB-209ENST00000481673 H0Y9J4 135 aa12.51□□□□□ -0.41
CHKB-209ENST00000481673 CHTF8P0CG12 524 aa12.51□□□□□ -0.41
CHKB-209ENST00000481673 DEFB105AQ8NG35 78 aa12.51□□□□□ -0.41
CHKB-209ENST00000481673 EPM2AB3EWF7 344 aa12.49□□□□□ -0.41
CHKB-209ENST00000481673 LY6G6CO95867 125 aa12.49□□□□□ -0.41
CHKB-209ENST00000481673 FAM19A1Q7Z5A9 133 aa12.49□□□□□ -0.41
CHKB-209ENST00000481673 DPH3Q96FX2 82 aa12.48□□□□□ -0.41
CHKB-209ENST00000481673 A0A1B0GW54 56 aa12.47□□□□□ -0.41
CHKB-209ENST00000481673 PHF5AQ7RTV0 110 aaKnown RBP12.47□□□□□ -0.41
CHKB-209ENST00000481673 SPACA4Q8TDM5 124 aa12.47□□□□□ -0.41
CHKB-209ENST00000481673 LINC00476Q8WZB0 136 aa12.46□□□□□ -0.41
CHKB-209ENST00000481673 C3orf84H3BNL1 204 aa12.46□□□□□ -0.42
CHKB-209ENST00000481673 RTL8CO15255 209 aa12.45□□□□□ -0.42
CHKB-209ENST00000481673 ERC2-IT1O76042 136 aa12.44□□□□□ -0.42
CHKB-209ENST00000481673 ST20-AS1Q8NBB2 130 aa12.43□□□□□ -0.42
CHKB-209ENST00000481673 ANAPC13Q9BS18 74 aa12.43□□□□□ -0.42
CHKB-209ENST00000481673 TNP2Q05952 138 aa12.41□□□□□ -0.42
CHKB-209ENST00000481673 IGKV3D-7A0A0C4DH55 119 aa12.4□□□□□ -0.42
CHKB-209ENST00000481673 PRLHP81277 87 aa12.4□□□□□ -0.42
CHKB-209ENST00000481673 IGLV5-52A0A0A0MRZ9 124 aa12.39□□□□□ -0.43
CHKB-209ENST00000481673 PANO1I0J062 215 aa12.39□□□□□ -0.43
CHKB-209ENST00000481673 BCE1O60756 84 aa12.39□□□□□ -0.43
CHKB-209ENST00000481673 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.39□□□□□ -0.43
CHKB-209ENST00000481673 F8WEM9 126 aa12.38□□□□□ -0.43
CHKB-209ENST00000481673 Q6ZVQ6 151 aa12.38□□□□□ -0.43
CHKB-209ENST00000481673 HIGD2AQ9BW72 106 aa12.38□□□□□ -0.43
CHKB-209ENST00000481673 FUSP35637 526 aaKnown RBP eCLIP12.38□□□□□ -0.43
CHKB-209ENST00000481673 UBE2AP49459 152 aa12.38□□□□□ -0.43
CHKB-209ENST00000481673 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
CHKB-209ENST00000481673 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
CHKB-209ENST00000481673 C1orf137Q5JT78 98 aa12.36□□□□□ -0.43
CHKB-209ENST00000481673 CXCL6P80162 114 aa12.36□□□□□ -0.43
CHKB-209ENST00000481673 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
CHKB-209ENST00000481673 SMIM29Q86T20 159 aa12.34□□□□□ -0.43
CHKB-209ENST00000481673 C3orf22Q8N5N4 141 aa12.34□□□□□ -0.43
CHKB-209ENST00000481673 PLAC8Q9NZF1 115 aa12.34□□□□□ -0.43
CHKB-209ENST00000481673 TGP01266 2768 aa12.33□□□□□ -0.44
CHKB-209ENST00000481673 SPRR1BP22528 89 aa12.33□□□□□ -0.44
CHKB-209ENST00000481673 HAMPP81172 84 aa12.32□□□□□ -0.44
CHKB-209ENST00000481673 IGLV8-61A0A075B6I0 122 aa12.31□□□□□ -0.44
CHKB-209ENST00000481673 HIST1H4AP62805 103 aaKnown RBP12.31□□□□□ -0.44
CHKB-209ENST00000481673 KRTAP13-1Q8IUC0 172 aa12.3□□□□□ -0.44
CHKB-209ENST00000481673 Q8NBF4 154 aa12.3□□□□□ -0.44
CHKB-209ENST00000481673 NREPQ16612 68 aa12.29□□□□□ -0.44
CHKB-209ENST00000481673 SPRR4Q96PI1 79 aa12.29□□□□□ -0.44
CHKB-209ENST00000481673 KMT2AQ03164 3969 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms