RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 DEFB130AP0DP74 79 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 SZT2Q5T011 3432 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 PDE4DIPQ5VU43 2346 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 SPINK6Q6UWN8 80 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 CNTRLQ7Z7A1 2325 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 SPACA4Q8TDM5 124 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 USMG5Q96IX5 58 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 PRO2289Q9P1D8 64 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 Q9Y3F1 56 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 CENPFP49454 3210 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 CEP350Q5VT06 3117 aa0.51□□□□□ -2.33
RPL39P28-201ENST00000465655 KNL1Q8NG31 2342 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 SRCAPQ6ZRS2 3230 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 MGAQ8IWI9 3026 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 A0A1B0GUV1 79 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 H3BUA1 57 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 HTN3P15516 51 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 RPL37P61927 97 aaKnown RBP0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 DEFB103AP81534 67 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 DEFB109BQ30KR1 87 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 LCE2DQ5TA82 110 aaPredicted RBP0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 Q6ZSA8 131 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 PLAC4Q8WY50 150 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 ANAPC11Q9NYG5 84 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 DMDP11532 3685 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 ICE1Q9Y2F5 2266 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 WDR87Q6ZQQ6 2873 aa0.5□□□□□ -2.33
RPL39P28-201ENST00000465655 DCHS1Q96JQ0 3298 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 DNAH10Q8IVF4 4471 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 ASXL3Q9C0F0 2248 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 FRAS1Q86XX4 4008 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 RANBP2P49792 3224 aaKnown RBP0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 H3BUX3 64 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 KLK9Q2XQG4 91 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 SPENQ96T58 3664 aaKnown RBP0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 BRWD1Q9NSI6 2320 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 ABCA1O95477 2261 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 DNAH8Q96JB1 4490 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 ZFHX2Q9C0A1 2572 aaPredicted RBP0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 CFAP54Q96N23 3096 aa0.49□□□□□ -2.33
RPL39P28-201ENST00000465655 DNAH1Q9P2D7 4330 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 CFAP47Q6ZTR5 3102 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 DNAH2Q9P225 4427 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 A0A1W2PPR1 153 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 INE1O15225 51 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 DEFB4AO15263 64 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 SPRR1AP35321 89 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 KRTAP24-1Q3LI83 254 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 COX6B2Q6YFQ2 88 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 Q6ZRN7 208 aaPredicted RBP0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 CHD7Q9P2D1 2997 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 PRO0255Q9UI72 69 aa0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 KMT2BQ9UMN6 2715 aaPredicted RBP0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 APOBP04114 4563 aaKnown RBP0.48□□□□□ -2.33
RPL39P28-201ENST00000465655 SPEGQ15772 3267 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 ANK2Q01484 3957 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 BSNQ9UPA5 3926 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 VPS13AQ96RL7 3174 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 FLG2Q5D862 2391 aaPredicted RBP0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 ZDBF2Q9HCK1 2354 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 CACNA1EQ15878 2313 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 PLCE1Q9P212 2302 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 MKI67P46013 3256 aaKnown RBP0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 UNC80Q8N2C7 3258 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 COL6A6A6NMZ7 2263 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 SPRR1BP22528 89 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 KRTAP13-3Q3SY46 172 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 PP632Q6XCG6 107 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 LYSTQ99698 3801 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 S4R3F8 94 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 CREBBPQ92793 2442 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 CACNA1GO43497 2377 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 FN1P02751 2386 aaKnown RBP0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 DNAH14Q0VDD8 3507 aa0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.47□□□□□ -2.33
RPL39P28-201ENST00000465655 SMG1Q96Q15 3661 aaKnown RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 CSMD1Q96PZ7 3565 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 WDFY3Q8IZQ1 3526 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 TNRC18O15417 2968 aaPredicted RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 ZZEF1O43149 2961 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 C5orf42Q9H799 3197 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 REV3LO60673 3130 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 XIRP2A4UGR9 3374 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 ANK3Q12955 4377 aaKnown RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 PRUNE2Q8WUY3 3088 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP10-8P60410 259 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 U3KQA8 63 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DYNC2H1Q8NCM8 4307 aaKnown RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 WNK2Q9Y3S1 2297 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 FRYLO94915 3013 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA5O15230 3695 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 HUWE1Q7Z6Z7 4374 aaKnown RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 CMYA5Q8N3K9 4069 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTBN1Q01082 2364 aaKnown RBP0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 TRIOBPQ9H2D6 2365 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms