RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 ANKRD11Q6UB99 2663 aaPredicted RBP-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 EDC4Q6P2E9 1401 aaKnown RBP-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ACACBO00763 2458 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 PKD1P98161 4303 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 LAMA3Q16787 3333 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ABCC10Q5T3U5 1492 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 MXRA5Q9NR99 2828 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 TRBV7-7A0A0K0K1E9 115 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 SPTY2D1-AS1A0A0U1RR47 76 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 D6R8Y8 96 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ATOX1O00244 68 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ETDBQ3ZM63 59 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 MUSTN1Q8IVN3 82 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 SERP2Q8N6R1 65 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 SAMD9Q5K651 1589 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 DNAH9Q9NYC9 4486 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 CCDC168Q8NDH2 2452 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 TMEM131LA2VDJ0 1609 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 PREX1Q8TCU6 1659 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 TRANK1O15050 2925 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ACACAQ13085 2346 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ZZEF1O43149 2961 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 TIAM2Q8IVF5 1701 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 CUBNO60494 3623 aa-0.15□□□□□ -2.43
PTPN22-203ENST00000460620 ITPR1Q14643 2758 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 FYCO1Q9BQS8 1478 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 RAPGEF2Q9Y4G8 1499 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 LRRC7Q96NW7 1537 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 USP9XQ93008 2570 aaPredicted RBP-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 MYO3AQ8NEV4 1616 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 ALKQ9UM73 1620 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 UQCRHLA0A096LP55 91 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 NDUFC1O43677 76 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 NDUFA3O95167 84 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 MT4P47944 62 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 C20orf78Q9BR46 151 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 TCEAL7Q9BRU2 100 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 SNHG12Q9BXW3 62 aa-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 DSPP15924 2871 aaKnown RBP-0.16□□□□□ -2.43
PTPN22-203ENST00000460620 DNAH6Q9C0G6 4158 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 FAT1Q14517 4588 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 NBPF19A0A087WUL8 3843 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 NEXMIFQ5QGS0 1516 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 ADAMTS12P58397 1594 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 PTPN23Q9H3S7 1636 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 DMXL1Q9Y485 3027 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 MYO18BQ8IUG5 2567 aa-0.16□□□□□ -2.44
PTPN22-203ENST00000460620 M0R143 59 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 SPRR2EP22531 72 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 COX7BP24311 80 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 SPRR2AP35326 72 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 DEFA5Q01523 94 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 ZNF720Q7Z2F6 126 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 C9orf62Q8N4C0 152 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 DPY30Q9C005 99 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 CDKN2A-AS1Q9UH64 79 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 MGAM2Q2M2H8 2515 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 LRRK2Q5S007 2527 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 USP9YO00507 2555 aaPredicted RBP-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 MAGI2Q86UL8 1455 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 NESP48681 1621 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 CICQ96RK0 1608 aaPredicted RBP-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 PLCH1Q4KWH8 1693 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 PPLO60437 1756 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 DNAH3Q8TD57 4116 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 GCN1Q92616 2671 aaKnown RBP-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 VPS13DQ5THJ4 4388 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 IQCF6A8MYZ5 107 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 ALKAL2Q6UX46 152 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 ACBD7Q8N6N7 88 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 UBE2D4Q9Y2X8 147 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 CCDC141Q6ZP82 1450 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 TEX14Q8IWB6 1497 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 CEP290O15078 2479 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 USP32Q8NFA0 1604 aa-0.17□□□□□ -2.44
PTPN22-203ENST00000460620 DDX60LQ5H9U9 1706 aaKnown RBP-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 WDR87Q6ZQQ6 2873 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 RGPD8O14715 1765 aaPredicted RBP-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 RGPD5Q99666 1765 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 ARFGEF2Q9Y6D5 1785 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 FAM186AA6NE01 2351 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 TACC2O95359 2948 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 TRAV21A0A0B4J279 112 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 H3BNG1 76 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 CCL22O00626 93 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 LINC00032P0C843 101 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 NMSQ5H8A3 153 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 WFDC9Q8NEX5 89 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 GAFA1Q96PS6 74 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 AKAP9Q99996 3911 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 CLIP1P30622 1438 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 TROQ12816 1431 aaPredicted RBP-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 ABCC2Q92887 1545 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 TJP1Q07157 1748 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 RICTORQ6R327 1708 aa-0.18□□□□□ -2.44
PTPN22-203ENST00000460620 ANKRD36CQ5JPF3 1778 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms